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Journal of Environmental Management 146 (2014) 383e399

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Journal of Environmental Management


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Review

Bacterial chromate reductase, a potential enzyme for bioremediation


of hexavalent chromium: A review
Hrudayanath Thatoi a, *, Sasmita Das a, Jigni Mishra a, Bhagwat Prasad Rath a,
Nigamananda Das b
a
Department of Biotechnology, College of Engineering and Technology, Biju Patnaik University of Technology, Techno-Campus, Ghatikia, Bhubaneswar
751003, Odisha, India
b
Department of Chemistry, North Orissa University, Takatpur, Baripada 757003, Odisha, India

a r t i c l e i n f o a b s t r a c t

Article history: Hexavalent chromium is mobile, highly toxic and considered as a priority environmental pollutant.
Received 28 March 2014 Chromate reductases, found in chromium resistant bacteria are known to catalyse the reduction of Cr(VI)
Received in revised form to Cr(III) and have recently received particular attention for their potential use in bioremediation process.
3 July 2014
Different chromate reductases such as ChrR, YieF, NemA and LpDH, have been identified from bacterial
Accepted 10 July 2014
Available online 8 September 2014
sources which are located either in soluble fractions (cytoplasm) or bound to the membrane of the
bacterial cell. The reducing conditions under which these enzymes are functional can either be aerobic or
anaerobic or sometimes both. Enzymatic reduction of Cr(VI) to Cr(III) involves transfer of electrons from
Keywords:
Bioremediation
electron donors like NAD(P)H to Cr(VI) and simultaneous generation of reactive oxygen species (ROS).
Hexavalent chromium Based on the steps involved in electron transfer to Cr(VI) and the subsequent amount of ROS generated,
Chromium resistance two reaction mechanisms, namely, Class I “tight” and Class II “semi tight” have been proposed. The
Chromate reductase present review discusses on the types of chromate reductases found in different bacteria, their mode of
action and potential applications in bioremediation of hexavalent chromium both under free and
immobilize conditions. Besides, techniques used in characterization of the Cr (VI) reduced products were
also discussed.
© 2014 Elsevier Ltd. All rights reserved.

1. Introduction Further, the rate of degradation of pollutants by microorganisms is


often very slow which limits the feasibility of using them in practice
Environmental pollution due to indiscriminate discharge of for bioremediation processes (Whiteley and Lee, 2006). In this
hazardous and harmful wastes containing toxic heavy metals at context, the use of sole enzymes isolated from bacterial species is
elevated concentrations from industries and mining sites has been more advantageous than using whole microorganisms as revealed
a growing concern all over the world and therefore, underline the from several studies undertaken during last few years (Sutherland
importance of applying effective treatment methods to reduce the et al., 2004; Pieper et al., 2004). Moreover, the enzymatic bio-
concentration of heavy metals down to acceptable limit. Among transformations do not generate toxic side products as often found
various approaches, bioremediation using biological agents such as in the case of chemical and some microbiological processes and
bacteria, fungi, and their enzyme is one of the attractive and therefore, possess less risk of biological contamination on
effective methods for cleaning the environment from toxic pollut- ecosystem. Their action is specific to the substrate in comparison to
ants (Ruggaber and Talley, 2006). The microorganisms play an microorganisms and they are also more mobile than microorgan-
important role in bioremediation processes which is, however, isms because of their smaller size (Gianfreda and Bollag, 2002).
limited by several factors. For instance, the microorganisms that are Although the enzymatic treatment processes have tremendous
actively involved in the bioremediation of a specific pollutant might scope for bioremediation, its practical application often faces with
be inhibited by other pollutants present in the same environment. several challenges in terms low activity, productivity and stability
of the enzyme in addition to sustainability of their application.
Efforts are on in search of potential microbes capable of producing
enzymes that can transform the toxic metal ions to their less/non-
* Corresponding author.
E-mail address: hn_thatoi@rediffmail.com (H. Thatoi). toxic forms under wide range of environmental conditions (e.g. pH,

http://dx.doi.org/10.1016/j.jenvman.2014.07.014
0301-4797/© 2014 Elsevier Ltd. All rights reserved.
384 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

temperature, presence interring species etc.) for their practical many reducing agents such as Fe(0), Fe(II), sulphide, organic C-
application in bioremediation processes. based materials etc. Chemical methods usually require high energy
Traditionally, most of the enzymes used in bioremediation inputs and/or large quantity of chemical reagent. Besides, these
process are confined to bacterial mono- or di-oxygenases, re- methods are ineffective at lower concentration of Cr(VI) present in
ductases, dehalogenases, cytochrome P450 mono-oxygenases; large volume of wastewaters and generate large quantity of toxic
enzymes involved in lignin metabolism (such as laccases, lignin sludges, disposal of which again causes secondary pollution. On the
and manganese peroxidases isolated from white-rot fungi) and other hand, biological methods such as microbial detoxification of
bacterial phosphotriesterases (Pieper et al., 2004). The most Cr(VI) are economical, safe, and sustainable (Shakoori et al., 2000;
representative class of enzyme used in the remediation of polluted Eccles, 1995) and also free from residual pollution problems.
environments are hydrolases, dehalogenases, transferases and ox- Many bacterial species possess chromate reductase activity, where
idoreductases; mainly obtained from bacteria, fungi, plants and the enzyme converts the highly toxic and soluble hexavalent
microbeeplant associations (Rao et al., 2010). These enzymes are chromium to less toxic trivalent form having much lower solubility;
either intracellular (produced but retained within the originating thereby reduction by the enzymes affords a means of chromate
microbial cells) or, extracellular (exported outside from the origi- bioremediation (Park et al., 2000). In recent years, chromate re-
nating microbial cells) in nature. Enzyme production by microor- ductases have raised enormous interest among the researcher
ganisms is usually low in its natural conditions. The production can across the globe because of their central role in mediating chro-
be enhanced, although to a limited extent, in laboratory conditions mium toxicity and their potential use in bioremediation/bio-
through optimization of growth parameters. On the otherhand, the catalysis (Ackerley et al., 2004b). This results in isolation of diverse
recombinant DNA technology offers a cost effective process for chromate reductase bacterial species, characterization and their
large scale production of enzymes with enhanced stability and use in reduction of Cr(VI) to Cr(III) to develop a relatively envi-
activity (Alcalde et al., 2006). In fact, the production of enzymes in ronment friendly process alternative to the conventional methods.
industrial scale from the suitable microbial strain is of paramount
importance for wide spread practical applications of enzymatic 3. Bacterial resistance to Cr(VI)
bioremediation process. Keeping the above in view, the present
review highlights the production of chromate reductase enzymes The chromosomal resistance in bacteria makes use of strategies
from bacterial sources, their mode of action and prospects of their like specific or unspecific Cr(VI) reduction, free radical detoxifying
applications both under free and immobilized conditions for activities, repair of DNA damage (Morais et al., 2011) and processes
bioremediation of one of the toxic environmental pollutants viz. associated with sulphur or iron homeostasis (Ramirez-Diaz et al.,
hexavalent chromium. 2008). Many microorganisms have the potential to survive toxic
metal-polluted environments by developing mechanisms to avoid
2. Chromium toxicity and bioremediation options metal toxicity like, metal efflux, adsorption uptake, DNA methyl-
ation, and metal biotransformation either directly by enzymatic
The widespread industrial uses of chromium or its compounds reduction to less mobile and toxic forms or indirectly through
and mining activities result the release of Cr-containing wastes into making complexes with metabolites (such as H2S) (Camargo et al.,
the environment that contaminate the soils, sediment and surafe/ 2005; Pei et al., 2009; Soni et al., 2012). Microbial reduction of
ground waters. Although essential for numerous living organisms Cr(VI) to Cr(III) is particularly important from bioremediation point
in trace quantities, Cr is toxic at elevated levels. As a transition of view which can be considered as an additional chromate resis-
mental, it exists in different valence states ranging from eII to þVI tance mechanism (Cervantes et al., 2001). A variety of Cr-resistant
with Cr(VI) and Cr(III) being the dominant species in the environ- bacteria with high Cr(VI)-reducing potential have been reported
ment. Out of two commonly occurring states, Cr(VI) is toxic to including Pseudomonas, Bacillus, Enterobacter, Deinococcus, Shewa-
biological systems due to its strong oxidizing potential that nella, Agrobacterium, Escherichia, Thermus and other species
invariably damage the cells (Kotas and Stasicka, 2000). Cr(VI) is (Ohtake et al., 1987). It has been reported that both chromate
known to harmful to all forms of living systems (Wise et al., 2004) resistant as well as non-resistant strains can reduce chromate but
including microorganisms (Ackerley et al., 2006). Moreover, it is the growth of later are significantly inhibited at higher concentra-
mutagenic (Puzon et al., 2002), carcinogenic (Codd et al., 2003), tions of chromate (Bopp and Ehrlich, 1988). Therefore, the bacterial
teratogenic (Asmatullah et al., 1998), and has been classified as one property, which is particularly useful for an effective bioremedia-
of the priority pollutants by several regulatory agencies including tion approach, is one that combines high tolerance/resistance with
United States Environmental Protection Agency (USEPA) that pose the ability to reduce Cr(VI) to Cr(III) (Dhal et al., 2013).
greatest threat to humans (Cheung and Gu, 2007). Hexavalent Several microorganisms exhibiting Cr(VI)-reducing activities
chromium usually enters the cell via sulphate transporter pathway and resistance have been isolated and identified from chromate-
and gets reduced to Cr(III) by various enzymatic and non- contaminated environment as well as natural, uncontaminated
enzymatic processes. During this process, the reactive oxygen ecosystems (Schmieman et al., 1998; Turick et al., 1996; Wang and
species (ROS) are formed that exert deleterious effects on cells by Shen, 1995). Microorganisms that have the ability to reduce Cr(VI)
interacting with protein as well as nucleic acid (Cheung and Gu, are usually called as chromium reducing bacteria (CRB). Among
2007). In contrast, trivalent chromium is having much less CRB, the Gram-positive bacteria are shown to have significant
toxicity and bioavailabilty (He et al., 2009) as it readily forms tolerance to Cr(VI) toxicity at relatively high concentrations,
insoluble hydroxide/oxides above pH ~ 5.5. In fact, the biological whereas Gram-negative bacteria are much more sensitive to Cr(VI)
cell membranes are nearly impermeable to Cr(III). As such, detox- (Coleman, 1988). Microorganisms found in metal contaminated
ification of Cr(VI) by its reduction to Cr(III) is of great environmental environment are naturally resistant for such metals. An investiga-
importance. tion carried out by Das et al. (2013) revealed that the bacteria iso-
Chemical reduction of hexavalent chromium to trivalent form lated from chromite mine soils are resistant towards Cr(VI) along
followed by precipitation is the most common and widely used with other heavy metals. It is well known that chromate resistance
methods among others (e.g. electrochemical treatment, reverse and reduction are not necessarily interrelated, and not all Cr(VI)-
osmosis, adsorption and ion-exchange) employed for its removal resistant bacteria can reduce Cr(VI) to Cr(III). Thus, both chro-
from contaminated bodies. It involves the reduction of Cr(VI) by mium resistance and reduction are found to be independent
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 385

Fig. 1. Mechanisms of chromate resistance in bacterial cells. (A) Mutation in chromosome-encoded sulfate uptake transporters (B) Extracellular reduction of Cr(VI) to Cr(III) (C)
Intracellular reduction of Cr(VI) to Cr(III) by chromate reductases (D) Function of SOS repair system in reducing oxidative stress (E) Efflux of chromate from the cytoplasm. (F) Action
of ROS scavenging enzyme in reduction of oxidative stress.

properties of bacteria (Bopp and Ehrlich, 1988; Silver, 1997). Bac- (B) Extracellular Cr(VI) reduction
terial Cr(VI) reduction can either occur ‘directly’ by the use of en-
zymes or ‘indirectly’, where Cr(VI) reduction is catalysed by the Extracellular reduction of Cr(VI) to Cr(III) followed by its binding
metabolic end-products such as Fe(II) and HS of iron and with functional groups on bacterial cell surface is another resis-
sulphate-reducing bacteria (Hwang et al., 2002). Bacteria employ tance mechanism (Ngwenya and Chirwa, 2011). Binding of reduced
different resistance mechanisms to overcome the Cr(VI) toxicity in Cr(III) to bacterial cell surface helps its easy removal from the
the environment which include the reduced uptake of Cr(VI), contaminated environment. Peptidoglycan components present in
extracellular Cr(VI) reduction, reactive oxygen species (ROS) the cell walls of the bacteria found to be potent binder of Cr(III)
detoxifying enzymes/intracellular Cr(VI) reduction, DNA repair (Hoyle and Beveridge, 1983). It has demonstrated that some species
enzymes, efflux of Cr(VI) from cell and ROS scavenging are depicted of bacteria possess adsorptive properties which facilitate the
in Fig. 1(AeF). removal of metal species from aquatic solutions. These properties
are mostly dependent on the distribution of reactive functional
(A) Reduced uptake of Cr(VI) groups like carboxyl, amine, hydroxyl, phosphate and sulfhydryl
groups on the cell wall surface of bacteria (Parmar et al., 2000).
One of the efficient protective systems against the lethal effects Thus there is no apparent entry of Cr(VI) in the cell when its
of Cr(VI) is probably associated with reduced uptake of Cr(VI) reduction occurs extracellularly.
similar to sulphate uptake pathway and with sulphur or iron ho-
meostasis. Since chromate ion (CrO2 4 ) has structural resembles (C) ROS detoxifying enzymes/Intracellular Cr(VI) reduction
with tetrahedral sulphate ion (SO2 4 ) (Fig. 2), it can easily pass
through cell membranes via SO2 4 transport pathway, with the help During Cr(VI) reduction to Cr(III) a short lived, highly reactive
of non specific anionic (SO2 3
4 , PO4 ) carriers (Wenbo et al., 2000). intermediate Cr(V) radical is generated which redox cycles. Thus,
The transport of chromate is diminished if the chromosome- Cr(V) is oxidized back to Cr(VI), giving its electron to dioxygen and
encoded sulphate uptake pathway in bacteria is mutated generating reactive oxygen species, referred as ROS. Generation of
(Ramirez-Diaz et al., 2008). The microorganisms present in metal ROS results in oxidative stress in the bacteria. In this process, the
contaminated environment undergo quick mutation to develop bacterial proteins are also induced by chromate in the defense
Cr(VI) resistance that leads to reduced Cr(VI) uptake by sulphate against oxidative stress leading to an additional mechanism of
transport pathway. Susceptible organisms can become insensitive chromate resistance (Ramirez-Diaz et al., 2008). However, the
by mutation or by incorporation of the genetic information which oxidative stress arising due to the ROS are nullified to a large extent
encodes the resistance (Kümmerer, 2004). by detoxifying enzymes like glutathione transferase, superoxide
dismutase (SOD), catalase, etc. (Ackerley et al., 2004b).

(D) DNA repair enzymes.

Protection of bacterial cells by DNA repair enzymes of damaged


DNA caused by Cr(VI) is another defense shield. Cr(VI) enters the
bacterial cell which is readily reduced to Cr(III) by the action of
Fig. 2. Structural similarity of chromate and sulfate ions.
386 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

Fig. 3. Physical map of the chr locus in O. tritici 5bvl1 strain. The Tn5 insertion in chrA is indicated by the small black vertical arrowhead.


various enzymatic or non-enzymatic activities that leads to gen- During the reduction process, molecular oxygen is reduced to O2
eration of ROS, which in turn exerts deleterious effects on protein radicals, which generates H2O2 via dismutation. Hexavalent chro-

and DNA in the cell. The ROS generated causes damage to DNA, like mium reacts with H2O2 to generate OH radicals via a Fanton like
base modification, single-strand breaks, double-strand breaks. reaction. This mechanism is similar to the oxidation of Fe(II) with

Such damages caused to DNA can be repaired by special DNA repair H2O2 in the Fenton reaction as the production of OH from Fe(II) via
mechanism like the SOS response enzymes (RecA, RecG, RuvB) (Hu Fenton reaction is facilitated greatly by the formation of Fe(II)
et al., 2005). For example, in Escherichia coli, Cr(VI) has long been complexes that have vacant sites for H2O2 coordination.
known to induce the E. coli SOS repair system that protects DNA
from oxidative damage (Llagostera et al., 1986). Similarly DNA 4. Genetic mechanism of Cr(VI) resistance and tolerance
helicases like RecG and RuvB, components of the recombinational
DNA repair system, have shown to participate in the response to The bacterial species, able to grow in the toxic conditions
DNA damage caused by chromate in Pseudomonas aeruginosa prevalent in Cr(VI) contaminated environment, are generally
(Miranda et al., 2005). Cellular Cr(VI) reduction is the activation assumed to be tolerant/resistant to chromium (Viti and
process, producing redox-active intermediates Cr(V/IV) and stable Giovannetti, 2001). The terms resistance and tolerance are often
Cr(III) forming Cr-DNA adducts which is the most abundant form of used interchangeably although their significance is different. Ac-
DNA damage that causes mutations and chromosomal breaks cording to Gadd (1992), the resistance is “the ability of a microor-
(Zhitkovich, 2011). ganism to survive toxic effects of metal exposure by means of a
detoxification mechanism produced in direct response to the metal
(E) Efflux of Cr(VI) from cell species concerned” while tolerance defined as “the ability of a
microorganism to survive metal toxicity by means of intrinsic
Efflux of chromate ions from the cell cytoplasm, mediated by properties and or environmental modification of toxicity”.
transporters encoded by specific plasmid-borne genes, is also a High Cr(VI) resistance and a high Cr(VI) reduction capability
resistance mechanism found in bacteria. Efflux of chromate seems makes a bacterial strain suitable candidate for effective remediation
to be an efficient and widespread mechanism of resistance, which purposes (Christ et al., 2012). The capability of Cr(VI)-reduction is
prevents the accumulation of toxic ions inside the bacterial cells effected by an additional chromosome or plasmid resistance
(Ramirez-Diaz et al., 2008). The best understood chromate- mechanism that represents a potentially useful detoxification
resistance system is that conferred by P. aeruginosa ChrA protein process for several bacteria (Pattanapipitpaisal et al., 2001;
belongs to the chromate ion transporter CHR superfamily. ChrA, is a Cervantes et al., 2001). It has been reported that genes for Cr(VI)
hydrophobic membrane protein, encoded by plasmids pUM505 of reduction can either be plasmid borne as observed in the cases with
P. aeruginosa and pMOL28 from Cupriavidus metallidurans (formerly several Pseudomonas species (Bopp and Ehrlich, 1988; Bopp et al.,
Alcaligenes eutrophus and Ralstonia metallidurans) (Cervantes et al., 1983) or located on the chromosomal DNA as found in several
1990; Nies et al., 1990) that have been demonstrated as involved in Bacilli and Enterobacteriaceae (Li and Krumholz, 2007).
chromate resistance by chromate efflux mechanism (Ramirez-Diaz Several chromosomal genes have been found to be responsible
et al., 2008). ChrA protein functions as a chemiosmotic pump that for imparting resistance to Cr(VI) in bacteria. For example, the
exports chromate from cytoplasm or periplasm to outside driven by chrR gene located on the chromosome of P. aeruginosa conferred
the proton motive force (Alvarez et al., 1999). CHR proteins from resistance to chromate (Aguilar-Barajas et al., 2008). Morais et al.
several bacteria have been demonstrated as involved in chromate (2011) reported that Ochrobactrum tritici contains several chro-
resistance by chromate efflux mechanism (Ramirez-Diaz et al., mate resistance genes namely chrB, chrA, chrC and chrF located in
2008). the chromosomal DNA (Fig. 3) of which chrB and chrA genes were
essential for establishment of high resistance in chromium-
(F) ROS scavenging sensitive bacteria. The genetic studies also showed that ruvB
gene of O. tritici is related to chromate resistance (Morais et al.,
Cr(VI) after entering the cell can be reduced to Cr(V). Electron 2011). In yet another bacterium, Ralstonia metallidurans (Fig. 4),
donors like NAD(P)H or some other organic compounds (like the chromate resistance determinant chr2 (comprising genes
glucose) donate electrons to Cr(VI), leading to the formation of chrB2, chrA2 and chrF2) was reported to be present on the chro-
relative unstable toxic intermediate Cr(V). Although the chromate mosome (Jhunke et al., 2002). Apart from chromosome, bacterial
reductases reduce Cr(V) further to Cr(III) by a two-electron transfer plasmids also contain genes which are resistance to many toxic
(via “semi-tight” mechanism), sometimes this reaction is not very metals and metalloids (Gadd, 2010) and encode systems devoted
rapid. As a result a portion of Cr(V) intermediate is quickly reoxi- to protect bacterial cells from the oxidative stress caused by
dized to Cr(VI) thereby generating ROS by a Fenton-like reaction. chromate. Resistance systems related to plasmid genes are

During this process hydroxyl radicals ( OH) are formed in the mi- encoded membrane transporters, which mediate the efflux of
crobial cells (Shi and Dalal, 1994) as depicted in the equation below: chromate ions across the cytoplasmic membrane. This mecha-
nism has been studied in detail with P. aeruginosa. In this bac-
Cr(V) þ H2O2 / Cr(VI) þ OH þ OH

terium, the chromate transporter chrA functions as a
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 387

Fig. 4. AeC. Genes involved in chromate resistance in Ralstonia metallidurans CH34. AeC. Regions on megaplasmid pMOL28 (A) or the bacterial chromosome (B, C) involved in
chromate resistance.

chemiosmotic pump that extrudes chromate using the proton another instance, plasmid pMOL28 from R. metallidurans, was
motive force (Alvarez et al., 1999). Genetic analyses of chromate found to encode the chrA chromate efflux pump, in addition to
resistant P. aeruginosa (Cervantes et al., 1990) and A. eutrophus chrC and chrE proteins that seem to be involved in chromate
(Nies et al., 1990) have shown that reduced accumulation of resistance (Jhunke et al., 2002). The chromate resistant strain of
Cr(VI) by bacteria is plasmid-mediated. Genes for a hydrophobic Pseudomonas fluorescens (LB300), isolated from the Hudson River,
polypeptide, chrA, were identified in chromate resistance plas- was found to be 40e200 fold more resistant to chromate than
mids of both P. aeruginosa and A. eutrophus. The polypeptide chrA were either Pseudomonas taken from other environments or
is postulated to be responsible for the outward membrane other bacteria taken from the same environment. Plasmids
translocation of chromate anions (Cervantes and Silver, 1992). In mediated chromate resistance has also been reported in the cases

Fig. 5. Comparison of genetic determinants of chromate resistance and chromate reduction between (a) Bacillus cereus SJ1 and (b) Bacillus thuringiensis strain 97-27 (He et al., 2010).
388 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

Fig. 6. Pathways of anaerobic chromate reduction by bacteria.

of Pseudomonas putida (Friello and Chakrabarty, 1980) and (2013) reported that the gene encoding thioredoxin oxidoreductase
Streptococcus lactis (Efstathiou and McKay, 1977). located on a mre operon in Desulfovibrio desulphuricans G20, was
In some cases, the sequence elements carried on the plasmid also involved in reduction of Cr(VI).
DNA are transposable across species. Branco et al. (2008) identified The regulation of Cr(VI) reduction in an operon structure was
a transposon based chrBACF operon as the key determinant for high also observed in Bacillus cereus SJ1 and Bacillus thuringiensis strain
chromate tolerance of Ochrobactrum tritici strain 5bvl1 (Fig. 3). The 97-27. The Cr(VI) reduction genes were found to be upward regu-
activation of this operon was highly selective and provided resis- lated by the promoter chrI which in turn regulated the Cr(VI)
tance principally through efficient extrusion of chromate. For resistance gene chrA1 and arsenic resistance genes arsR and arsB
instance, the plasmid pLHB1 from P. fluorescens LB300 carrying the (He et al., 2010) (Fig. 5). In B. cereus SJ1 putative chromate transport
Cr(VI) reducing genes could be transferred to E. coli to produce operon, chrlA1 and two additional chrA genes encoding putative
E. coli ATCC 33456 by conjugation (Shen and Wang, 1993). Zou et al. chromate transporters imparted resistance to chromate. ChrA1 and

Fig. 7. Mechanisms of enzymatic Cr(VI) reduction under aerobic (left) and anaerobic (right) conditions. (MR: membrane bound chromate reductase; SR: soluble chromate
reductase). Dotted lines depicted the exceptional reduction cases.
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 389

chrl were found to be inducible genes. Azoreductase genes azoR and chromate precipitates was seen on the cell surface (Wang et al.,
four nitroreductase genes nitR were also found to be involved in 1989; Fuji et al., 1990). In this case, the Cr(VI) reduction was sub-
chromate reduction of B. cereus SJ1 species (He et al., 2010). stantially inhibited by the presence of oxygen. Studies with
E. cloacae HO1 have implicated the respiratory chain in the transfer
5. Mechanisms of enzymatic Cr(VI) reduction of reducing equivalents to Cr(VI) through cytochrome c (Fig. 7). The
chromate reductase activity of Shewanella putrefaciens MR-1 was
Microorganisms can remove a number of metallic and metalloid found to be associated with the cytoplasmic membrane of anaer-
species from the environment or waste streams by reducing them obically grown cells (Myers et al., 2000) where formate and NADH
to a lower oxidation state (Lovely, 1995). Infact most of the toxic served as electron donors for the reductase. In case of P. putida,
compounds, especially heavy metals, preferably follow the reduc- unlike S. putrefaciens, NADPH served as an electron donor for the
tion pathway instead of oxidative one by native microbes (with a chromate reductase (Park et al., 2000). Anaerobic Cr(VI) reduction
few exceptions) as their reduced forms are comparatively less toxic. involving membrane-associated reductase has also been reported
In case of metals, the higher oxidation states are always more toxic in some chromate-reducing bacteria which utilized H2 as electron
(10e100 times) than lower oxidation state. The microbes have the donor and Cr(VI) as an electron acceptor in the electron transport
ability to reduce almost all metallic/metalloid species in higher chain (Lovley and Phillips, 1994; Quilntana et al., 2001). There are,
oxidation state and the microbial reduction of Cr(VI) to Cr(III) forms however, exceptions in which soluble enzymes have been found to
the most widely studied example of metal bioremediation. mediate the process of Cr(VI) reduction under anaerobic conditions
A wide diversity of microorganisms is known to have evolved (Barrera-Díaz et al., 2012). For instance, Cr(VI) reduction by soluble
biochemical pathways for reducing toxic compounds by both aer- cytochrome c3, isolated from anaerobic bacterium Desulfovibrio
obic and anaerobic processes. Aerobic bioremediation involves vulgaris, has been reported (Lovley and Phillips, 1994).
microbial reactions that require oxygen to go forward. The bacteria In Shewanella, Enterobacter and sulphate reducing bacteria the
use a carbon substrate as the electron donor and oxygen as the terminal electron acceptors like nitrate and sulphate are found to
electron acceptor. Aerobic reduction is a cometabolic process where be replaced by chromate (Chardin et al., 2003; Myers et al., 2000).
microbes do not gain energy or carbon from degrading a contam- Besides these, a number of inorganic species including O 2
2 , SO4 ,
inant, instead, the contaminant is degraded via a side reaction (EPA, NO 2 , NO
3 , Fe(III) and Cr(VI) can also act as terminal electron ac-
2006). On the other hand, anaerobic bioremediation involves mi- ceptors during bacterial respiration. In the absence of oxygen,
crobial reactions occurring in the absence of oxygen. It encom- Cr(VI) acts as a terminal electron acceptor in the respiratory chain
passes many processes, including fermentation, reductive for a large array of electron donors, including carbohydrates, pro-
dechlorination, methanogenesis, and sulphate- and nitrate teins, fats, hydrogen, NAD(P)H and endogenous electron reserves
reducing conditions depending on the contaminant. In anaerobic (Cheung and Gu, 2007).
metabolism, sulphate, nitrate, carbon dioxide, oxidized materials, The overall bio-reduction of Cr(VI) and precipitation of Cr(III) is
or organic compounds may replace oxygen as the electron acceptor. illustrated in Eqs. (1) and (2). Under anaerobic conditions with
Many of the microorganisms that catalyse redox reactions use the glucose as an electron donor, microbial Cr(VI) reduction is related
metals or metalloids as terminal electron acceptors in anaerobic to Eq. (3) (Singh et al., 2011).
respiration. Such microorganisms, known as dissimilatory metal-
þ 
reducing bacteria, are diverse both phylogenetically (Lonergan CrO2 3þ
4 (aq) þ 8H (aq) þ 3e / Cr (aq) þ 4H2O (1)
et al., 1996) and physiologically (Lovley et al., 1997). Among the
different groups microorganisms, Cr(VI) reduction was investigated Cr3þ(aq) þ 4H2O / Cr(OH)3(s) þ 3Hþ(aq) þ H2O (2)
in large number of bacterial species. The mechanisms through

which bacterial strains reduce Cr(VI) to Cr(III) are variable and C6H12O6 þ 8CrO2
4 (aq) þ 14H2O / 8Cr(OH)3(s) þ 10OH (aq)
species specific dependant (McLean et al., 2000). þ 6HCO(aq) (3)
Microbial Cr(VI) reduction takes place in two different pro-
cesses. Cr(VI) reduction is found to be cometabolic (not partici- Sulphate and iron reducing bacteria (SRB and IRB) are impor-
pating in energy conservation) in aerobic condition where as it is tant members of anaerobic microbial communities with economic,
predominantly dissimilatory under anaerobic conditions (Ishibashi environmental and biotechnological interest. Cr(VI) reduction by
et al., 1990). biogenic iron(II) and sulphides generated by IRB and SRB is ~100
times faster than that by CRB alone. SRB produce H2S, which serve
5.1. Anaerobic Cr(VI) reduction as a Cr(VI) reductant. Anaerobic bacteria mainly use Cr(VI) as ter-
minal electron acceptor or reduce Cr(VI) in the periplasmic space
Anaerobic reduction by bacteria is usually associated with by hydrogenase or reduced cytochrome. For example sulphate
membrane bound reductases like flavin reductases, cytochromes reducing bacteria like D. vulgaris and Desulfovibrio fructosovorans,
and hydrogenases that can be part of electron transport system and the involvement of cyt c3 and NieFe dehydrogenase in Cr(VI)
use chromate as the terminal electron acceptor. Microbial Cr(VI) reduction has been reported by Chardin et al. (2003) and Michel
reduction was first reported by Romaneko and Korenkov (1975) et al. (2001). Chardin et al. (2003) have reported that among
using an anaerobic bacterium, Pseudomonas dechromaticans, iso- [Fe], [NiFe], and [NiFeSe] hydrogenases isolated from SRB of the
lated from sewage sludge. This Gram-negative, motile, facultative genera Desulfovibrio and Desulfomicrobium, [Fe] hydrogenase from
anaerobe bacterium reported to reduce Cr(VI) under anaerobic D. vulgaris strain Hildenborough showed reduction of Cr(VI) with
conditions using Cr(VI) as a terminal electron acceptor. Later a highest rate. In a previous study with SBR, Desulfotomaculum
facultative anaerobic bacterium, Enterobacter cloacae, isolated from reducens MI-1, Cr(VI) acted as the sole electron acceptor for its
industrial wastewater, was also found to use chromate/dichromate reduction (Tebo and Obraztsova, 1998). Some other anaerobes
as terminal electron acceptor during the Cr(VI) reduction (Wang capable of reducing Cr(VI) to Cr(III) are Microbacterium sp. MP30
et al., 1989, 1991) in the periplasmic space by membrane bound (Pattanapipitpaisal et al., 2001), Geobacter metallireducens (Lovley
hydrogenase or reduced cytochrome (Fig. 6). et al., 1993), Pantoea agglomerans SP1 (Francis et al., 2000). Agro-
Membrane-associated chromate reductase activity was first bacterium radiobacter EPS-916 (Llovera et al., 1993), etc. Even
observed in E. cloacae HO1 where the insoluble form of reduced bacteria tolerant to radiations like Deinococcus radiodurans R1 are
390 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

quite efficient in reducing Cr(VI) anaerobically (Fredrickson et al., Similar behaviour was also observed with P. synxantha (McLean
2000). et al., 2000). In contrast, several species like P. fluorescens showed
Microorganisms are also capable of indirect Cr(VI) reduction by that the Cr(VI) resistance is not depended on the capacity of their
a biotic-abiotic coupling. A wide range of bacteria are known to reduction of heavy metal. In Pseudomonas sp. CRB5, NADH was the
couple the oxidation of organic compounds and H2 for reduction of preferred electron donor for the reduction of chromate by the
Fe(III) and SO2
4 to Fe(II) and H2S, respectively under oxygen stress soluble enzyme contained in cytoplasm (McLean and Beveridge,
conditions (Nevin and Lovley, 2002). Reduction of Cr(VI) with 2001).
bacterially produced H2S followed by precipitation of reduced Soluble enzyme that can catalyse the reduction of Cr(VI) to
Cr(III) is an important mechanism in sulphate-rich soil environ- Cr(III), can detoxify its environment. Once reduced, Cr(III) usually
ments when anaerobic conditions prevail (Losi et al., 1994; Pettine binds to the electronegatively charged functional groups on the
et al., 1994). The H2S produced by sulphate respiring bacteria in bacterial cell surface, which serve as nucleation sites for further
anaerobic systems diffuses out into the medium and reduces Cr(VI) precipitation. Cr(III) also undergoes complexation with cell enve-
(Kamaludeen et al., 2003). lope and capsule exopolymer which in turn inhibits the metals
from entering the cytoplasm. By employing this process, chromate
5.2. Aerobic Cr(VI) reduction can be effectively detoxified and removed from Cr(VI) enriched
medium (McLean and Beveridge, 2001).
Aerobic Cr(VI) reduction is generally associated with soluble
proteins and requires NAD(P)H as an electron donor (Shen and 5.3. Both aerobic and anaerobic reduction
Wang, 1993) (Fig. 7). These soluble proteins are localized as cyto-
solic proteins as demonstrated by Puzon et al. (2002) in E. coli. Some bacteria are capable of reducing chromate under both
Apart from this, the Cr(VI)-reducing activity in aerobes like Pseu- aerobic and anaerobic conditions, for example, P. fluorescens LB300,
domonas ambigua, P. putida, E. coli (Shen and Wang, 1993) and Ba- isolated from chromium-contaminated sediments, was capable of
cillus coagulans (Philip et al., 1998) have been found to be present in reducing Cr(VI) to Cr(III) both aerobically and anaerobically (Bopp
the soluble fraction of the cells (Ishibashi et al., 1990). Garbisu et al. and Ehrlich, 1988). Under anaerobic condition P. fluorescens LB300
(1998) have reported that a Gram-positive aerobe, Bacillus subtilis utilized acetate as an electron donor for chromate reduction while
reduced hexavalent chromium by using cell free extracts of the the microorganism used a variety of electron donors for chromate
bacterium. In case of Gram-negative bacteria, several Pseudomonas reduction under aerobic conditions (Bopp and Ehrlich, 1988). A
have also been investigated to assess their Cr(VI) reduction abilities. number of other chromate-resistant bacteria including Achromo-
The ability of an aerobic bacterium such as P. aeruginosa to reduce bacter sp. (Ma et al., 2007), E. coli, P. ambigua (McLean and
Cr(VI) has been extensively studied (Bopp et al., 1983; Ohtake et al., Beveridge, 2001), P. putida (Barak et al., 2006), E. cloacae (Wang
1987). Other aerobes involved in Cr(VI) reduction are A. eutrophus, et al., 1989), Providencia sp. (Thacker et al., 2006), Brucella sp.
Bacillus sp., E. coli sp ATCC 33456, Shewanella alga BrY-MT, etc. (Thacker et al., 2007) and Bacillus sp. (Liu et al., 2006) have also
(Guha et al., 2001; Camargo et al., 2003). Besides, a number of shown the Cr(VI) reduction ability under both aerobic and anaer-
bacteria belonging to genera Bacillus, Ochrobactrum, Pseudomonas, obic conditions although their rate of reduction varied widely. For
Escherichia and Paracoccus have also been reported for their Cr(VI) instance, P. ambigua G-1 and P. putida PRS2000 reduced Cr(VI)
reduction abilities under aerobic conditions (Hussein et al., 2005; under both these conditions with higher reduction rates whereas
Sultan and Hasnain, 2005; Das et al., 2014). faster reduction rate of Cr(VI) under aerobic conditions than
The NADH was also the preferred electron donor for the anaerobic conditions has been reported in the case of E. coli ATCC
reduction of chromate by the soluble enzyme present in cytoplasm 33456 (Shen and Wang, 1993).
of Pseudomonas sp. CRB5 (McLean and Beveridge, 2001). Previous
studies also showed that NADH/NADPH served as electron donors 6. Biological Cr(VI) reduction pathways
for Cr(VI) reduction by the soluble enzymes present in P. ambigua
(Suzuki et al., 1992) and P. putida (Ishibashi et al., 1990). Another Several components of protoplasm of bacterial cells such as
Gram-positive aerobe belonging to Vigribacillus sp., isolated from NADH (NAD(P)H in some species), flavoproteins and other hem-
saline environment, with the ability to reduce Cr(VI) at higher eproteins (Ackerley et al., 2004a) readily reduce Cr(VI) to Cr(III).
concentrations in salt medium has been reported recently by Bacterial reduction of Cr(VI) can occur directly through enzymatic
Mishra et al. (2012). As exceptions, P. maltophilia O-2 and Bacillus activity (Lovely and Coates, 1997; Losi et al., 1994) or indirectly
megaterium TKW3 were found to utilize membrane-associated re- through non-enzymatic pathways by producing compounds such
ductases for Cr(VI) reduction, in spite of being aerobes (Cheung and as glutathione, cystein etc. that can reduce Cr(VI) (Fendorf and Li,
Gu, 2007). 1996) (Fig. 8).
In presence of oxygen, the enzymes from aerobes responsible
for reducing Cr(VI) to Cr(III) require NAD(P)H. Two reaction steps 6.1. Non-enzymatic Cr(VI) reduction
have been suggested to be involved in the reduction reactions; first
Cr(VI) accepts one electron from one molecule of NADH to gener- In non-enzymatic process Cr(VI) reduce to Cr(III) in presence of
ates Cr(V) as an intermediate (Eq. (4)) and then Cr(V) accepts two different chemical compounds, produced in the bacterial metabolic
electrons to form Cr(III) (Eq. (5)) (Singh et al., 2011). process. For instance, it is well known that Fe(II) and HS, the
anaerobic metabolic end products of iron and sulphate-reducing
Cr6þ þ e / Cr5þ (4) bacteria, can reduce hexavalent chromium. The most powerful
non-enzymatic chromate reductants could be ascorbic acid, gluta-
Cr5þ þ 2e / Cr3þ (5) thione (GSH), cysteine, hydrogen peroxide (H2O2) for microbial
cells, and ascorbate for higher organisms (Poljsak et al., 2010).
The ability to reduce Cr(VI) by aerobic bacteria such as Reduction of Cr(VI) may also take place by chemical reactions
P. aeruginosa (Bopp et al., 1983; Ohtake et al., 1987) has been associated with compounds present in intra/extra cellular com-
extensively studied and found the resistance to Cr(VI) is propor- pounds such as amino acids, nucleotides, sugars, vitamins, organic
tional to the increased efflux of the heavy metal by cell membrane. acids or glutathione (Dhal et al., 2013).
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 391

Fig. 8. A schematic diagram of bacterial Cr(VI) reduction (direct and indirect).

6.1.1. Enzymatic Cr(VI) reduction enzymes are extracellular in nature. A couple of examples are
The enzymes from different organisms, ranging from bacteria to available in support of this observation. Priester et al. (2006) re-
mammals, take part in the reduction of hexavalent chromium. As ported that the chromate reductases originating in the cytoplasm
far as mammalian sources are concerned, the enzymes like alde- reduced Cr(VI) extracellularly in P. putida. Cheung and Gu (2007)
hyde oxidases, cytochrome p450 and Dt-diaphorase are involved in reported that extracellular enzymes (cytosolic proteins) are solu-
Cr(VI) reduction. However, microbial enzymes are most important ble chromate reductases such as flavin reductases, nitrate re-
for reduction of Cr(VI) from environmental point of view. ductases, flavin proteins and ferrireductases. Wang et al. (1991)
Patra et al. (2010) reported the role of several enzymes involved observed that bacteria with membrane bound reductases can also
in Cr(VI) reduction in bacteria. Several oxidoreductases (Fig. 9), reduce Cr(VI) to Cr(III) by extracellular processes, by using electron-
with otherwise different metabolic functions that have been re- shuttling compounds coupled to membrane reduction. Most of
ported to catalyse Cr(VI) reduction in bacteria, include nitro- these enzymes are produced inductively i.e., they are produced in
reductase (Kwak et al., 2003), iron reductase, quinone reductases
(Gonzalez et al., 2005), hydrogenases (Chardin et al., 2003), flavin
reductases (Ackerley et al., 2004a) as well as NAD(P)H dependant
reductases (Puzon et al., 2002). The type of bacterial chromate re-
ductases depends on the nature of bacteria carrying out the
reduction reaction, i.e., aerobic or anaerobic. Bacterial chromate
reductases are either localized in the membrane fraction (Wang
et al., 1991; Cheung et al., 2006) or in the cytosolic fractions
(Suzuki et al., 1992; Park et al., 2000; Bae et al., 2005) of the
chromate reducing bacteria. The enzymatic reduction of Cr(VI) in
bacteria is accomplished in different ways. Soluble reductases can
participate either in extracellular or intracellular reduction of Cr
(VI) (Elangovan et al., 2010; Das et al., 2014) whereas, membrane
bound reductase reduces by extracellular means (Wang et al., 1991).

6.1.2. Extracellular
In some cases, the Cr(VI) reducing enzymes, produced by bac-
terial cells, are exported into the media to reduce Cr(VI). These Fig. 9. Oxidoreductase enzymes found in bacteria that catalyse Cr(VI) reduction.
392 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

Table 1
Involvement of chromate reductases in one and two electron reduction mechanism.

Mechanism employed for chromate reduction Examples Effect on cells

One electron Reduction of Cr(VI) to Cr(III) occurs via Cr(V) intermediate. - LpDH Highly detrimental to bacterial cells
reducers A continuous shuttle between Cr(VI) and Cr(V) forms hap- - Cytochrome c due to more ROS generation.
pens with Cr(V) transferring 1 e- to O2, generating ROS - Glutathione reductase Chromate reducing efficiency of the
(superoxide, O2-2 ) in a Fenton-like reaction (Shi and Dalal, - Ferridoxin-NADP oxidoreductase bacteria declines.
1994; Barak et al., 2006) - NfsA (E. coli)
-
Two electron Transfer of 3 e to Cr(VI) results in its direct reduction to - ChrR (Ps. putida) Much lesser ROS generated than
reducers Cr(III). - YieF (E. coli) one electron reducer, hence less
1 e is transferred to O2, forming ROS (superoxide, O2 2 ). toxic to bacterial cells
No Cr(V) intermediate is involved hence no redox cycle
occurs.

presence of Cr(VI) in the solution and are therefore highly regulated ferridoxin-NAD (Shi and Dalal, 1990; Ackerley et al., 2004b). The
(Cheung and Gu, 2007). This regulation is controlled by regulatory physiological roles of these enzymes are to catalyse energetic or
elements (e.g., starvation promoter) that allow massive synthesis biosynthetic reactions (Barak et al., 2006).
under the unfavourable in situ environment. Smith and Gadd On the other hand, two electron reduction process of Cr(VI) to
(2000) established the extracellular Cr(VI) reduction pathways in Cr(III) proceeds without forming Cr(V) intermediate. As a result
sulphate reducing bacteria through a mass balance in which 90% of much lesser amount of ROS is generated during this process than
the reduced Cr was detected in the supernatant. that of one electron reduction. Two electron reducers being NAD(P)
dependent enzymes, are characterized by the transfer of hydride
6.1.3. Intracellular ion (H, the equivalent of a proton and two electrons) in a reaction
In intracellular processes, Cr(VI) is reduced in the cytosol us- as follows:
ing cytoplasmic soluble reductase enzymes. These enzymes play
an intermediate role between associated biological electron do- NADþ þ 2e þ 2Hþ / NADH þ Hþ
nors. The electron donors involved in an intracellular Cr(VI)
reduction are NADH and NADPH. Puzon et al. (2005) suggested NADPþ þ 2e þ 2Hþ / NADPH þ Hþ
that Cr(VI) was reduced intra-cellularly in the cytoplasm by a
bacterial enzyme, using NADH as the reductant. Streptomyces Some of the chromate reducing enzymes behaving as two
sp. MC1, isolated from sugar cane, has been shown to reduce electron reducers include ChrR from P. putida, YieF and NfsA from
Cr(VI) intracellularly (Polti et al., 2011). Many bacteria are also E. coli (Barak et al., 2006). The varying one and two electron
known to participate in the intracellular reduction of Cr(VI). reducing ability of different enzymes have been experimentally
Some examples of Gram negative bacteria that reduce Cr(VI) verified. Matin (2006) conducted an experiment to categorise two
intracellularly are P. aeruginosa, Pseudomonas sp. CRB5, E. coli chromate reducing enzymes viz., LpDH and YieF as either one or
ATCC 33456, Rhodobacter sphaeroides, Alcaligenes, Enterobacter two electron reducer. The in vitro study, using pure lipoyl dehy-
and P. fluorescens LB300. A Gram positive bacteria B. subtilis was drogenase (LpDH) by ‘redox balance’ method, revealed the con-
reported to carry out intracellular reduction of Cr(VI) by Ohtake sumption of only 24% of electrons for chromate reduction while
et al. (1990). remaining 70% electrons for ROS generation. The results indicated
LpDH as the one electron reducer. In contrast, an identical test with
7. Explanation of one and two electron Cr(VI) reduction YieF showed the use of only 25% of electrons for ROS generation
mechanism while the remaining electrons for Cr(VI) reduction indicating
YieF as the two electron reducer. Ackerley et al. (2004b) proposed
During Cr(VI) reduction, the bacterial cells are subjected to a broad classification of enzymes carrying out Cr(VI) reduction
oxidative stress due to simultaneous generation of ROS (Cheung i.e. Class I or Class II reductases enzymes based on sequence
et al., 2006). The oxidative stress affects viability of cells and the homologies.
efficiency of Cr(VI) reduction. On the basis of the magnitude of
oxidative stress generated, the enzymes reducing hexavalent 7.1. Class I chromate reductase
chromium can be categorized as either one electron reducers or
two electron reducers (Table 1). Two of the most commonly studied Class I enzymes include
In one electron reduction, Cr(VI) gets reduced to form the highly ChrR and YieF (Ackerley et al., 2004b). YieF dimer brings this Cr (VI)
unstable Cr(V) intermediate. Cr(V) can get oxidized back to Cr(VI) in reduction in one step without redox cycling, so that ROS generation
a redox cycle, giving its electrons to molecular oxygen and thus, is minimal where as the ChrR dimer appears to reduce chromate by
generating a large amount of ROS. The one electron reducers being a combination of two and one electron reduction steps, generating
flavin dependent enzymes follow the reaction as given below: more ROS than YieF. The transfer of two electrons from the enzyme
can either occur simultaneously (“tight”; as with YieF) or non-
FMN (Ox.) þ e þ Hþ / FMNHþ (Sq.) simultaneously (“semi-tight”; as with ChrR).
YieF, a dimeric flavoprotein, reduces chromate to Cr(III), isolated
Flavin nucleotide (FMN) is a tight, sometimes covalently bound from E. coli (Park et al., 2002; Ackerley et al., 2004b). The YieF
and are a part of flavoproteins. The oxidized flavin nucleotide enzyme is unique as it direct reduces of Cr(VI) to Cr(III) through a
(FMN(Ox.)) accepts one electron yeilding semiquinone (a stable four-electron transfer, in which three electrons are consumed in
free radical) form (FMNH(Sq.)). reducing Cr(VI) and fourth electron is transferred to oxygen. Since
Some of the identified chromate reducing enzymes belonging the quantity of ROS generated by YieF in Cr(VI) reduction is mini-
to one electron reducers are lipoyl dehydrogenase (LpDH) from mal, it is regarded as a more effective reductase than ChrR for Cr(VI)
Clostridium kluyveri, cytochrome c, glutathione reductase and reduction (Park et al., 2002). In contrast to ChrR, YieF did not show
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 393

Table 2
Some Cr(VI)-reducing bacteria, along with the type of enzymes that they make use of to reduce Cr(VI) to Cr(III).

Sl No. Enzyme Type of enzyme Class/type Organism Mol wt (kDa) Structure Reference

1 ChrR Quinone reductase I E. coli Eswaramoorthy et al., 2012


2 Gh-ChrR Chromate reductase I Gluconoacetobacter hansenii Tetramer Jin et al., 2012
3 ChrR Flavoenzyme I Ps. Putida 50 Dimer Park et al., 2000
4 ChrA Flavoprotein family of reductases I Ps. aeruginosa, Cupriavidus Diaz-Perez et al., 2007
metallidurans (plasmid)
5 Chr NADH-dependent I R. sphaeroides 42 Monomer Nepple et al., 2000
6 YieF FMN or NAD(P)H dependent I E. coli 50 Dimer Ackerley et al., 2004b
chromate reductase
7 OYE enzyme Flavin oxidoreductase I S. carlsbergensis 45 Monomer Saito et al., 1991
8 Frp Flavin reductase P I Vibrio harveyi Zenno et al., 1998
9 NemA Chromate reductase I E. coli Robins et al., 2013
10 AzoR Azoreductase I E. coli Robins et al., 2013
11 Chromate NAD(P)H-dependent I Bacillus sp RE Elangovan et al., 2006
reductase
12 NfsA Nitroreductase (flavoprotein) II E. coli 50 Dimer Ackerley et al., 2004b
13 NfsB Nitroreductase II Vibrio harveyi 50 Monomer Kwak et al., 2003
14 _ NADPH dependent Thermus scotoductus 72 Dimer Opperman et al., 2008
15 YcnD FMN reductase II B.subtilis Morokutti et al., 2005
16 Suzuki enzyme NAD(P)H dep chromate reductase II Ps. Ambigua 65 Dimer Suzuki et al., 1992
17 EcdA Soluble chromate reductase II Ps. Putida Park et al., 2000
18 YdgL Nitroreductase Bacillus subtilis Minton et al., 2004 [patent]
19 KefF Nitroreductase II E.coli Prosser et al., 2010
20 chrBAC Efflux transporter Shewanella strain ANA-3 Aguilar-Barajas et al., 2008
21 25 kDa protein Cell free extract (inducible) Bacillus sp JDM-2-1 Zahoor and Rehman, 2009
22 FRase I FMN reductase II Vibrio (or Photobacterium) fischeri Zenno et al., 1994

semiquinone flavoprotein generation during chromate reduction 8. Identification of Cr(VI) reductases from bacteria
and consumed only some 25% of NADH electrons to molecular
oxygen in ROS generation. The ChrR and YieF homologs were A number of researchers have isolated and identified chromate
shown to contain the characteristic signature of the NADH-dh2 reductase enzymes (Table 2) from different bacterial sources. The
family of protein, which consists of bacterial and eukaryotic NAD(P) chromate reductase that play a role in reducing Cr(VI) belong to
H oxidoreductases (Li and Krumholz, 2007). He et al. (2010) several classes, viz. quinone reductases (in E. coli), nitroreductases (in
introduced another chromate reductase namely ChrA protein, iso- Vibrio sp.), NADPH-dependent enzymes (in Bacillus sp.), etc. ChrR, a
lated from B. cereus SJ1 and B. thuringiensis strain, which belong to quinone reductase enzyme belongs to the flavodoxin superfamily
class I family. and isolated from E. coli, able to reduce Cr(VI) (Eswaramoorthy et al.,
N-ethylmaleimide reductase (NemA), isolated from E. coli, is a 2012). Jin et al. (2012) reported that a putative chromate reductase
member of the “old yellow enzyme” (Class I) family of flavopro- viz. Gh-ChrR, isolated from the bacterium Gluconoacetobacter han-
teins and catalyses the reduction of N-ethylmaleimide (NEM) to senii, reduces Cr(VI) to Cr(III) in presence of NAD(P)H. ChrA,
N-ethylsuccinimide (Miura et al., 1997). NemA is able to accept a belonging to NADPH dependent flavoprotein family of reductase and
variety of substrates, including chromate (Robins et al., 2013) and isolated from P. aeruginosa/Cupriavidus metallidurans (formerly
catalyses chromate reduction through the addition of one or two Alcaligenes eutrophus), was also found responsible for resistance and
electrons from the cofactors NADH/or NADPH (Roldan et al., reduction of Cr(VI) (Ramirez-Diaz et al., 2008). ChrA is transporter
2008). enzyme responsible for chromate resistance trough chromate efflux
mechanism. A soluble oxidoreductase (NemA), isolated from E. coli,
7.2. Class II chromate reductase can able to reduce Cr(VI) by using NADH as a cofactor (Robins et al.,
2013). A NADH-dependent oxidoreductase (YcnD), isolated from a
The Class II charomate reductases, which possess nitroreductase Gramepositive bacterium B. subtilis, has been reported to reduce
activity bear no homology to the class I enzyme but are homolo- chromate along with nitroorganic compounds and series of azo dyes
gous to chromate reductase purified from P. ambigua (Park et al., (Morokutti et al., 2005). Another NAD(P)H dependent chromate
2002). Two other members of the class II family, namely NfsA reductase purified from P. putida viz. Suzuki enzyme with molecular
protein of E. coli and the ChfN protein of B. subtilis (Park et al., 2002). weight 65,000 Da efficiently reduced Cr(VI) at relatively higher
NsfA reduces nitrocompounds and quinone by an obligatory two temperature and pH (Suzuki et al., 1992). A soluble chromate
electron transfer (Zenno et al., 1996; Ackerley et al., 2004b). Thus reductase EcdA, isolated from P. putida by Park et al. (2000) was also
NfsA, like ChrR is semitight chromate reducer (Ackerley et al., found to reduce chromate at higher temperature and pH. Other
2004b). The Class II enzymes reduce quinones and nitro- chromate reductase enzymes having chromate reduction ability
compounds effectively, but vary in their ability to transform chro- include OYE enzyme from Thermus scotoductus (Saito et al.,1991), Frp
mate (Park et al., 2002). The NfsA protein has received wide flavin reductase from E. coli (Zenno et al., 1998), FerB from Paracoccus
attention because of its ability to detoxify nitrocompounds. This denitrificans (Sedlacek and Kucera, 2010) and Azo reductase from
protein possesses therapeutic properties and ability to activate Bacillus sp. OY1-2 (Maier et al., 2004).
prodrugs used in cancer chemotherapy (Carroll et al., 2002). Park
et al. (2002) reported another enzyme of Class II family ChfN pro- 9. Progress in Cr(VI) reduction by free and immobilized
tein of B. subtilis, in electrophoretically pure state, to possess enzymes
chromate reductase activity (accession numbers 3225092). Kwak
et al. (2003) reported that the nitroreductases are efficient in Elangovan et al. (2010) studied the Cr(VI) reduction by cell free
chromate reduction. extract (CFE) from Arthrobacter rhombi-RE in presence of NADH.
394 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

The specific Cr(VI) reductase activity of the CFE of this strain at enzyme immobilized on alginate beads and Zeolite resin was
30  C and a pH of 6.0 was found to be 0.46 nM Cr(VI) reduction/mg higher than gelatin gel, polyacrylamide gel, and PVA. Applications
protein/min. Addition of NADH enhanced the chromate reductase of immobilized enzymes in chromium(VI) reduction have been
activity to 0.77 nM Cr(VI) reduced/mg protein/min. In this case, the sparsely studied. However, there is a great scope of application of
supernatant obtained after harvesting the cells (extracellular en- enzyme immobilization technology for Cr(VI) bioremediation pro-
zymes) showed less chromium reductase activity (0.13 nM Cr(VI) gramme which needs to be explored.
reduction/mg protein/min) as compared to CFE (Elangovan et al.,
2010). This clearly showed that the Cr(VI) reduction was associ-
ated with the soluble fraction of the cells and not with extracellular 10. Techniques used for characterization of Cr(VI) reduced
enzymes, which corroborates the earlier observations with E. coli product
(Shen and Wang, 1993), Desulfovibrio vulgaris (Lovley and Phillips,
1994), P. putida (Ishibashi et al., 1990) and Bacillus QC1-2 (Campos Hexavalent chromium is a strong oxidant and its chemical
et al., 1995). Cr(VI) reductase activity of the bacteria were studied reduction by biomolecules results Cr(III) usually via Cr(V)/Cr(IV)
by measuring the decrease in Cr(VI) per unit of enzyme per minute intermediates which precipitates as hydroxide, Cr(OH)3, at pH  7.0
(Elangovan et al., 2010). In a recent study, Rath et al. (2014) reported (Garcia et al., 2006). In biological systems such as microbial
high extracellular chromate reductases activity (3.67 Uml1) under reduction, the reduction of Cr(VI) to Cr(III) is rather complex and
optimized set of conditions from Bacillus amyloliquefaciens isolated the nature of the reduced product is mostly dependent on the type
from chromite mine soil of Sukinda, India. The chromate reductase of bacterial strains, reaction parameters (pH, media composition,
activity of CFE of another strain, Arthrobacter sp. SUK 1201 has been presence of electron donor or complexing agents etc.) and reaction
studied by Dey and Paul (2013) which found to be a constituent in environment (aerobic/anaerobic). Once reduced by microbial pro-
nature and reduced Cr(VI) with decreasing efficiency at increased cesses, the Cr(III) may either bind to the functional groups of bac-
Cr(VI) concentration. Previously, the in vitro reduction of Cr(VI) was terial cell or form stable nucleation sites for further precipitation of
studied using cell-free extracts from a Cr(VI) reducing Bacillus fir- Cr(III) mineral phases (McLean et al., 2000). It is well known that
mus KUCr1 strain. Chromium reductases activity of this bacterium bacteria are excellent nucleation sites for fine-grained mineral
was found to be constitutive and its activity was observed both in formation due to their high surface area-to-volume ratio and the
soluble cell fractions and membrane cell fractions (Sau et al., 2010). presence of electronegative functional group such as carboxyl,
Experiments on Cr(VI) reduction by cell free extract revealed phosphoryl and hydroxyl groups. A proper knowledge of final
that additional electron donors like NADH and NAD(P)H have reduced product and identification of reduction intermediate is,
accelerated the Cr(VI) reductase activity of CFE of Bacillus sphaericus therefore, essential to develop bioremediation process for practical
AND 303 (Pal and Paul, 2004). Fractionation and assay of CFE of use. With the advent of sophistication in analytical techniques, a
Bacillus ES 29 revealed that a soluble NADH dependent enzyme was wide variety of spectroscopic, microscopic, X-ray diffraction etc.
responsible for the reduction of Cr(VI) (Camargo et al., 2003). Philip methods have been used to identify the bioreduced Cr(III) species
et al. (1998) reported that the residual organic matter present in the during last two decades and the important observations are briefly
CFE of Bacillus coagulans might have acted as the electron donor for described in this section.
Cr(VI) reduction. A soluble Cr(VI) reductase present in E. coli ATCC It is widely believed that reduction to Cr(III) is the final pathway
33456 was responsible for Cr(VI) reduction under both aerobic and step in the microbial Cr(VI) reduction chain because bacterial cells
anaerobic conditions (Shen and Wang, 1993). The enzyme was become encrusted with Cr-rich precipitates (Fude et al., 1994). A
purified and characterized from the cytoplasm from this bacterium TEM/EDS study of Cr(VI) reduced species associated with bacterial
which is significantly inhibited by the presence of other heavy cell of a Gram-negative bacterium, resembling P. synxantha, showed
metal ions like Ag2þ, Cd2þ, Hg2þ and Zn2þ (Bae et al., 2005). that the bacterial cell surfaces were uniformly covered with bound
Apart from use of free enzymes, immobilized enzymes were also Cr(III) (with surface functional groups) and amorphous precipitates
used in bioremediation programme. The immobilized enzymes and (McLean et al., 2000). In a study conducted later, McLean and
proteins have been extensively used in antibiotic production, drug Beveridge (2001) reported the formation of fine-grained Cr(III)
metabolism, food industry, biodiesel production and bioremedia- precipitates, mostly chromium hydroxide mineral phases such as
tion (Khan and Alzohairy, 2010). It has been also reported that the Cr(OH)3 by Pseudomonas after Cr(VI) reduction. This result was also
immobilized enzymes are much better suited for ex situ bioreme- supported by TEM-EDX and SAED analyses which revealed that the
diation (Russell et al., 2003). Immobilized enzymes have long life- surfaces of the bacterial cells were uniformly stained with bound
spans, much easier to handle and separate from the products Cr(III) and amorphous precipitates. SEM-EDAX study also revealed
(Kandelbauer et al., 2004). Thus, enzyme immobilization facilitates the extracellular reduction of Cr(VI) by Leucobacter sp. encrusted
their reuse in bioremediation. It has also been reported that with amorphous Cr(OH)3 on cell surface (Zhu et al., 2008).
immobilization makes the enzyme more resistant to temperature, In a recent study (Srivastava and Thakur, 2007) on reduction of
pH and substrate concentration swings giving it a longer lifetime biosorbed chromate to Cr(III) by Acinetobactor sp. and its micro-
and higher productivity per active unit (Russell et al., 2003; scopic analyses by SEM-EDS and TEM revealed Cr(III) precipitation
Gianfreda and Rao, 2004; Kandelbauer et al., 2004). with hydroxyl or carboxyl group in side the bacterial cell (intra-
Several natural and synthetic support materials such as agar, cellular precipitation). Intracellular reduction of Cr(VI) to Cr(III) has
alginate, carrageenan, cellulose, and its derivatives like collagen, also been reported in the case of bacterial species A. haemolyticus
gelatin, polyacrylamide, polyester, polystyrene, and polyurethane (Pei et al., 2009). Analyses of reduced species associated with
have been used for cell immobilization (Munjal and Sawhney, bacterial cell by FT-IR, FESEM-EDX and TEM indicated the forma-
2002). With the advancement in enzyme immobilization technol- tion of intracellular Cr(III) in complex form with carboxyl, hydroxyl
ogy, it is anticipated that the application of immobilized Cr(VI) and amide groups of bacteria. Absence any precipitate on the cell
reductase could be a promising approach for bioremediation of wall region and reductase test further supported the intracellular
Cr(VI)-contaminated wastewater over a wide range of environ- reduction of Cr(VI) transported into the cell. Cheung et al. (2006)
mental conditions. The effect of different matrices on Cr(VI) also reported aggregation of reduced Cr(III) deposited along the
reduction by CFE-immobilized Arthrobacter rhombi-RE was inves- intracellular membrane region for Bacillus megaterium TKW3
tigated by Elangovan et al. (2006). They observed that the activity of incubated with Cr(VI).
H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399 395

On the other hand, the studies on Cr(VI) detoxification by a


sulphate reducing bacteria, Desulfovibrio vulgaris, revealed the
accumulation of Cr(III) precipitate on the cell surface or at a dis-
tance from cell (Goulhen et al., 2006). Identification of mineral
phases in these precipitate by high angle dark filed (HAADF)
coupled with electron energy loss spectra (EELS) indicated the
aggregate of nanometric basic unit which are amorphous in nature.
EELS fine structure analysis further showed the presence of Ca, Cr
and P in the mineral precipitate on the bacterial cell or distant from
the cell with tentative composition Ca0.34Cr0.7735(PO4).
Precipitation of reduced Cr(III) on the outer surface of Shewa- Fig. 10. A schematic diagram of Cr(VI) biomass interaction; Cr(VI) initially binds with
nella oneidensis only has also been suggested by Daulton et al. the functional groups of the biomass and then reduced to Cr(III).
(2002) as there was no electron-dense precipitate in the inner re-
gion of the bacterial cell. SAED image showed that the grains were
predominantly amorphous due to high degree of hydration. Bac- with microbial exudates (e.g., exopolymeric substance (EPS), cit-
terial cells having thickness of 30e40 nm with distinct cell line rate, alginate) in natural systems (Priester et al., 2006).
indicated saturation of cell boundary with absorbed element of FT-IR is one most extensively used techniques to identify the
heavy mass i.e., Cr. functional groups present in different bacterial cells and their co-
In bacterial Cr(VI) reduction it is commonly seen the reduced ordination with reduced Cr(III) species (Bueno et al., 2008;
Cr(III) species is present both in soluble and insoluble forms. Often a Lameiras et al., 2008; Quintelas et al., 2008; Das and Guha, 2007).
significant amount of reduced Cr(III) is present in the supernatant FTIR analysis of P. aeruginosa by Chatterjee et al. (2011) revealed in
in soluble form. A basic understating regarding immobilisation the involvement of two major functional groups of cell wall
reduced Cr(III) in different bacterial species and its nature inter- carboxyl and amino groups on the bacterial surface are responsible
action with the bacterial cell is, therefore, essential for bioremedi- for binding with the reduced Cr(III) (Fig. 10). The shift of peak po-
ation of Cr(VI) in real system. In view of above, Li et al. (2008) have sition in the FT-IR spectra of reduced species associated with Ba-
made several studies on Cr(VI) reduction with high Cr(VI) tolerant cillus sp. cell indicated Cr(III) coordination with surface functional
bacteria isolated from Cr-contaminated site, Ochrobactrum group (Dhal et al., 2010).
anthropi, in varying culture media and in presence aminoacids as A number of studies from our group have also been devoted to
coordinating ligands. XPS/EPR, FT-IR and SEM/AFM investigations assess the fate of bioreduced products of Cr(VI) using a variety of
showed the accumulation of most of reduced Cr(III) on the cell techniques. In one of the recent studies (Mishra et al., 2012), the
surface indicating the chemical interaction between functional TEM-SAED analyses of Vigribacillus sp. cell associated with reduced
groups (eCOOH and eNH2) on the cell surface and Cr(III) (Cheng product showed the accumulation of reduced Cr(III) species, either
et al., 2009). In addition, the precipitation of intracellular Cr(III) as Cr(OH)3 precipitate in nanometric size or immobilized on the
was also evident from thin-section TEM analysis of bacterial cell. bacterial cell surface, both on cell envelop and inside the cell sur-
The immobilization efficiency of Cr(III) was found media dependent face. The XRD pattern without any characteristic peaks of Cr(OH)3
showing up to 95% immobilization by the bacteria in TriseHCl indicated its amorphous nature or formed in small amount which
buffer medium as against only 70% in LB medium. In a later study did not produce any observable diffraction peak in the XRD pattern.
(Cheng et al., 2010), the X-ray absorption fine structure (XAFS) A similar result has also been obtained with the reduction of Cr(VI)
analysis on the cell debris provide further evidence of coordination by Bacillus sp. in LB medium (Dhal et al., 2010) or by Bacillus
of reduced Cr(III) on the surfaces via carboxyl- and amido- amyloliquefaciens in M9 medium. Interestingly, the characteristic
functional groups. However, in presence low molecular weight peaks of crystalline Cr(III) phosphate was observed in the XRD
aminoacids or their derivatives, most of the immobilized Cr(III) on pattern when the reduction was carried out using Bacillus sp. in M9
cell surface leached into supernatant indicating their stronger co- media containing phosphate anion in the media (Dhal et al., 2010).
ordination ability than the cell surface functional groups. Based on Thus the media composition greatly affects the overall distribution
their observation, a practical strategy has also been proposed for and nature of Cr(III) species.
effective immobilization of reduced Cr(III) species and possible UVeVis is another simple but versatile technique used for an-
application in real system. alyses of different types bio-based samples in solid state. Analyses
In a recent study of Cr(VI) reduction by B. amyloliquefaciens in LB of diffuse reflectance spectra (UVeVis-DRS) provide valuable in-
medium from our group also showed immobilization of more than formation in respect of oxidation state of reduced species. For
60% of reduced Cr(III) on bacterial cell which was very similar to instance, UVeVis-DRS of dried mass (Vigribacillus sp. cell associated
those reported in case of Cr(VI) reduction by Ochrobactrum anthropi with reduced species) in the reduction of Cr(VI) by Vigribacillus sp.
and P. synxartha (McLean et al., 2000). In an another study, rela- showed the characteristic peaks of Cr(III) species at ~600, 420 and
tively lower amount of immobilisation of reduced Cr(III) (35%) on 280 nm corresponding to spin allowed, Laporte forbidden transi-
the bacterial cell was found in the case Cr(VI) reduction by Vig- tions from the fundamental state 4T2g (F) / 4T2g (F), 4T2g (F) / 4T1g
ribacillus sp. in LB medium (Mishra et al., 2012). On the other hand, (F) and 4T2g (F) / 4T1g (P), respectively indicating the formation of
the Cr(VI) reduction with Arthrobacteria and Bacillus, revealed the Cr(III) from Cr(VI) (Mishra et al., 2012). A similar observation was
presence of almost all the reduced Cr(III) in the supernatants as also made in the case of Cr(VI) reduction with Bacillus amylolique-
soluble Cr(III) end products studies (Megharaj et al., 2003). faciens (Das et al., 2014). Distribution of total chromium content of
Several other studies also reported about distribution of reduced the reduced product in B. amyloliquefaciens was estimated by
Cr(III) species. For instance, Cr(VI) reduction by bacterial strains Atomic Absorption Spectroscopic analysis. Formation of Cr(III) in
(e.g., Pseudomonas sp. G1DM21 and P. putida) led to the production this case was also confirmed from the characteristic peak (at
of soluble Cr(III) end products and not Cr(OH)3 precipitate (Smith ~600 cm1) of Cr(III) in the Raman spectra (Das et al., 2014). Further
and Gadd, 2000). Indirect evidence of solubility Cr(III), due to analyses by TEM-EDX and SAED image showed the presence of
complex formation, was obtained from the fact that the solubility of electron dense particle within the bacterial cell indicating intra-
Cr(III) species significantly enhanced by strong interaction of Cr(III) cellular deposition of amorphous Cr(III) species in nanometric
396 H. Thatoi et al. / Journal of Environmental Management 146 (2014) 383e399

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