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  • Supplementary Table S11. The Significant Single Variants Associated With BMI

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    The document presents a table summarizing single variants significantly associated with body mass index (BMI). The table includes information on the chromosome, position, reference and alternate alleles, call rate, minor allele frequency, statistical measurement, p-value, beta value, and other details for each variant. The variants are intergenic or intronic and their nearest genes are provided. Allele frequencies from other databases are also listed.

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    The document presents a table summarizing single variants significantly associated with body mass index (BMI). The table includes information on the chromosome, position, reference and alternate alleles, call rate, minor allele frequency, statistical measurement, p-value, beta value, and other details for each variant. The variants are intergenic or intronic and their nearest genes are provided. Allele frequencies from other databases are also listed.

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    25 views3 pages

    Supplementary Table S11. The Significant Single Variants Associated With BMI

    Uploaded by

    kjhgfghjk
    The document presents a table summarizing single variants significantly associated with body mass index (BMI). The table includes information on the chromosome, position, reference and alternate alleles, call rate, minor allele frequency, statistical measurement, p-value, beta value, and other details for each variant. The variants are intergenic or intronic and their nearest genes are provided. Allele frequencies from other databases are also listed.

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    © All Rights Reserved
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    of 3

    Supplementary Table S11.

    The significant single variants associated with BMI


    CHROM POS REF ALTCALLRATEMAF STAT P value Beta
    1 92687424 A C 0.99821 0.05019 -5.5403 3.09E-08 -0.4911
    1 173232447 G A 0.97176 0.01298 10.2574 1.43E-24 1.741
    2 184282612 G A 0.94975 0.03605 9.6751 4.75E-22 1.033
    2 184282613 C T 0.9506 0.03636 9.7808 1.70E-22 1.041
    2 184282626 A G 0.95561 0.03514 11.1992 5.98E-29 1.208
    3 84262560 T G 0.96713 0.02271 10.4618 1.72E-25 1.382
    3 84263455 C A 0.97988 0.01282 8.2658 1.55E-16 1.395
    5 28723857 G A 0.98187 0.01972 10.0834 8.38E-24 1.409
    5 132122725 T C 0.98593 0.01035 8.5106 1.96E-17 1.586
    6 59475537 C T 0.92633 0.01968 10.4319 2.35E-25 1.457
    7 62445838 C T 0.97214 0.03546 9.6632 5.33E-22 1.01
    7 145235076 C A 1 0.0375 -6.4432 1.22E-10 -0.6389
    8 90392426 T C 0.97922 0.01562 9.053 1.64E-19 1.41
    10 39556257 C T 0.99915 0.05582 -6.4663 1.05E-10 -0.6263
    11 5181851 C A 0.96317 0.13478 -7.5439 4.94E-14 -0.4177
    11 5181852 C T 0.96184 0.13428 -7.4495 1.01E-13 -0.4129
    12 86587494 T C 0.99887 0.0521 -5.7157 1.12E-08 -0.4973
    19 27863467 T C 0.99367 0.05418 -7.3169 2.72E-13 -0.6554
    ated with BMI
    AF Function Nearest Gene Transcript dbSNP
    0.9499 intron_variant EVI5 NM_001308248. rs4000726
    0.02673 intergenic_region TNFSF4 :n.173232447G NA
    0.05936 intergenic_region ZNF804A :n.184282612G NA
    0.05927 intergenic_region ZNF804A :n.184282613C NA
    0.05535 intergenic_region ZNF804A :n.184282626A NA
    0.03839 intergenic_region CADM2 :n.84262560T> rs369036035
    0.02262 intergenic_region CADM2 :n.84263455C> rs372115169
    0.02843 intergenic_region CDH9 :n.28723857G> rs111534748
    0.01724 intergenic_region CSF2 :n.132122725T NA
    0.04521 intergenic_region PRIM2 :n.59475537C> NA
    0.04449 intergenic_region ZNF727 :n.62445838C> NA
    0.96251 intergenic_region TPK1 :n.145235076C rs11761202
    0.02569 intergenic_region TMEM64 :n.90392426T> rs202105360
    0.94414 intergenic_region ZNF37A :n.39556257C> NA
    0.85186 intergenic_region OR52Z1 :n.5181851C>A rs11036137
    0.85181 intergenic_region OR52Z1 :n.5181852C>T rs11036138
    0.94791 intron_variant MGAT4C NM_013244.3:c rs10745426
    0.94612 intergenic_region UQCRFS1 :n.27863467T> rs4805690
    1000GP3_AF gnomAD_AF TOPMed_AF
    0.95028 0.914138 0.918052
    NA 0.000328515 NA
    NA 0.000588813 3.19E-05
    NA 0.000588967 NA
    NA 0.000986388 NA
    NA 0.000163441 1.59E-05
    NA 0.000293121 5.57E-05
    0.0115815 0.0114781 0.0110777
    NA 0.000130149 NA
    NA NA 0.496711
    NA NA 0.495031
    0.874401 0.857722 0.844913
    NA 6.55E-05 NA
    NA NA 0.502317
    0.699681 0.714272 0.702607
    0.699681 0.714141 0.702512
    0.869609 0.846502 0.846028
    0.945088 0.962243 0.951938

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