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Diagnostic Microbiology and Infectious Disease 82 (2015) 326–330

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Diagnostic Microbiology and Infectious Disease


journal homepage: www.elsevier.com/locate/diagmicrobio

Molecular epidemiology of KPC-2–producing Enterobacteriaceae


(non–Klebsiella pneumoniae) isolated from Brazil☆
Carolina Padilha Tavares a, Polyana Silva Pereira a, Elizabeth de Andrade Marques b, Celio Faria Jr. c,
Maria da Penha Araújo Herkenhoff de Souza d, Robmary de Almeida e, Carlene de Fátima Morais Alves f,
Marise Dutra Asensi a, Ana Paula D’Alincourt Carvalho-Assef a,⁎
a
Laboratório de Pesquisa em Infecção Hospitalar, Oswaldo Cruz Institute, RJ, Brazil
b
Departamento de Microbiologia e Imunologia, Faculdade de Ciências Médicas, Universidade do Estado do Rio de Janeiro, RJ, Brazil
c
Laboratório Central de Saúde Pública do Distrito Federal, DF, Brazil
d
Laboratório Central de Saúde Pública do Espírito Santo, ES, Brazil
e
Laboratório Central de Saúde Pública de Goiás, GO, Brazil
f
Laboratório Central de Saúde Pública de Minas Gerais, MG, Brazil

a r t i c l e i n f o a b s t r a c t

Article history: In Brazil, since 2009, there has been an ever increasing widespread of the blaKPC-2 gene, mainly in Klebsiella
Received 20 October 2014 pneumoniae. This study aims to assess the molecular epidemiology and genetic background of this gene in
Received in revised form 31 March 2015 Enterobacteriaceae (non–K. pneumoniae) species from 9 Brazilian states between 2009 and 2011. Three hundred
Accepted 13 April 2015
eighty-seven isolates were analyzed exhibiting nonsusceptibility to carbapenems, in which the blaKPC-2 gene was
Available online 16 April 2015
detected in 21.4%. By disk diffusion and E-test, these isolates exhibited high rates of resistance to most of the
Keywords:
antimicrobials tested, including tigecycline (45.6% nonsusceptible) and polymyxin B (16.5%), the most resistant
KPC species being Enterobacter aerogenes and Enterobacter cloacae. We found great clonal diversity and a variety of
Enterobacteriaceae blaKPC-2–carrying plasmids, all of them exhibiting a partial Tn4401 structure. Therefore, this study demonstrates
Carbapenem resistance the dissemination of KPC-2 in 9 Enterobacteriaceae species, including species that were not previously described
Tn4401 such as Pantoea agglomerans and Providencia stuartii.
© 2015 Elsevier Inc. All rights reserved.

1. Introduction repeat sequences. There are 3 more frequently described isoforms of


this transposon (isoforms “a”, “b”, and “c”) (Cuzon et al., 2011). This
The emergence of Gram-negative pathogens resistant to many anti- structure, associated to the blaKPC gene, has also been described inserted
microbial classes has become a serious threat in the last decades within plasmids of different sizes and incompatibility groups (Andrade
(Nordmann et al., 2011). KPC-type carbapenemases have been a major et al., 2011; Cuzon et al., 2010; Pereira et al., 2013).
determinant of carbapenem resistance in Klebsiella pneumoniae KPC-producing K. pneumoniae was first described in Brazil in 2006
(Nordmann et al., 2011) as well as in many other Enterobacteriaceae (Monteiro et al., 2009), and its incidence has increased significantly. In
(Tzouvelekis et al., 2012). This enzyme was initially described during a 2010, a great dispersion of this gene was observed in several hospitals
surveillance study in the United States in 2001, quickly spreading in different Brazilian cities and states (Pereira et al., 2013). Pereira
throughout the world (Yigit et al., 2001). et al. (2013) observed that the spread of the blaKPC-2 gene in
KPC affords resistance to all beta-lactam antibiotics available, and its K. pneumoniae is both due to the dispersion of Tn4401 in different clones
gene has been described in mobile elements, such as plasmids and a and the dissemination of a clonal complex (CC11), in which the se-
Tn3-based transposon (Tn4401) associated with insertion sequence quence types (STs) 437 and 11 have played an important role.
(IS) structures (Naas et al., 2008). This transposon consists of a Regarding other Enterobacteriaceae species, there are few reports in
transposase (tnpA), a resolvase (tnpR), the blaKPC gene, and 2 insertion Brazil, such as Escherichia coli (D'Alincourt Carvalho-Assef et al., 2010),
sequences (ISKpn6 and ISKpn7). It is flanked by two 39-bp inverted Enterobacter cloacae (Zavaski et al., 2009), Salmonella spp. (Miriagou
et al., 2003), Serratia marcescens (Del Peloso et al., 2010), and Klebsiella
oxytoca (Almeida et al., 2013). However, the dissemination mechanisms
of the blaKPC gene in these species are still unclear. Therefore, the aim of
this study is to assess the molecular epidemiology and genetic back-
☆ This study was performed in Laboratório de Pesquisa em Infecção Hospitalar, Oswaldo
ground of the blaKPC gene in isolates belonging to 9 different species of
Cruz Institute, Brazil.
⁎ Corresponding author. Tel.: +55-212-5621-636. Enterobacteriaceae recovered from 9 Brazilian states between 2009
E-mail address: anapdca@ioc.fiocruz.br (A.P.D.’A. Carvalho-Assef). and 2011.

http://dx.doi.org/10.1016/j.diagmicrobio.2015.04.002
0732-8893/© 2015 Elsevier Inc. All rights reserved.
C.P. Tavares et al. / Diagnostic Microbiology and Infectious Disease 82 (2015) 326–330 327

2. Materials and methods 2.6. Genetic environment of the blaKPC gene

2.1. Clinical strains Plasmid analyses were performed by restriction digestion with S1
nuclease (Barton et al., 1995). The plasmids were transferred to a
From January 2009 to December 2011, the Laboratório de Pesquisa nylon membrane and hybridized with digoxigenin-labeled blaKPC-2
em Infecção Hospitalar in Instituto Oswaldo Cruz (Rio de Janeiro), probe generated by the PCR DIG detection system (Roche Diagnostics,
which contributes to the Nosocomial Infections Monitoring Network as- Mannheim, Germany) (Sambrok and Russel, 2001).
sociated to the Health Ministry of Brazil, received a total of 387 clinical
non–K. pneumoniae Enterobacteriaceae (NKPE) isolates exhibiting 3. Results
nonsusceptibility to at least 1 of the carbapenems (imipenem,
meropenem, or ertapenem), recovered from 9 Brazilian states: Espírito Of all NKPE nonsusceptible to carbapenems isolates studied, blaKPC was
Santo (ES), Minas Gerais (MG), Rio de Janeiro (RJ), the Federal District detected in 21.4% (83/387), representing 9 different Enterobacteriaceae
(DF), Goiás (GO), Pernambuco (PE), Alagoas (AL), Ceará (CE), and species. All of the isolates had the KPC-2 variant.
Bahia (BA). The isolates were identified by conventional techniques. The distribution of blaKPC-2 among species was Enterobacter
The blaKPC gene and its allelic variant were detected and identified by aerogenes (38 out of 121 isolates, 31.4%), E. cloacae (17 out of 100 iso-
PCR and sequencing, respectively (Peirano et al., 2009). lates, 17%), E. coli (13 out of 104 isolates, 12.5%), Pantoea agglomerans
(4 out of 10 isolates, 40%), P. stuartii (4 out of 11 isolates, 36.4%),
Citrobacter freundii (3 out of 8 isolates, 37.5%), K. oxytoca (2 out of 9 iso-
2.2. Antimicrobial susceptibility testing lates, 22.2%), S. marcescens (1 out of 19 isolates, 5.3%), and Morganella
morganii (1 out of 5 isolates, 20%). They were recovered from surveil-
Antimicrobial susceptibility testing of all KPC-producing isolates was lance swabs (n = 26, 31.3%), urine (n = 13, 15.7%), respiratory tract
performed and interpreted based on CLSI recommendations (CLSI, samples (n = 12, 14.5%), skin and soft tissue (n = 10, 12%), blood
2014) by the disk diffusion method with the following antimicrobials (n = 5, 6%), and other sites (n = 10, 12%). In 8.4% (n = 7) of the isolates,
(Oxoid, Hampshire, UK): ceftazidime (30 μg), cefotaxime (30 μg), cefe- the anatomical site of isolation was not reported. Most of the KPC-2–
pime (30 μg), aztreonam (30 μg), sulfamethoxazole/trimethoprim producing isolates were recovered from the DF (39.8% n = 33) and RJ
(25 μg), ciprofloxacin (5 μg), gentamicin (10 μg), and amikacin state (15.7% n = 13) (Table 1).
(30 μg). The MIC values were determined by Etest® (AB Biodisk, Through PFGE analysis, there was a great clonal diversity among
Solna, Sweden) for imipenem, meropenem, ertapenem, tigecycline, E. coli and E. cloacae isolates, 12 and 16 clonal groups, respectively. In
and polymyxin B according to the manufacturer's instructions. Broth E. aerogenes, 9 clonal groups were evident, with a predominant group
microdilution was performed to confirm resistance to polymyxin B (A, 65.8%) detected in 8 different hospitals from the DF and 3 different
(CLSI, 2014). The tests were interpreted based on CLSI 2014 breakpoints hospitals from GO, over an 11-month period. All P. stuartii isolates
(CLSI, 2014), except for tigecycline and polymyxin B for which EUCAST belonged to the same clonal group, detected in the same hospital in
2014 breakpoints were adopted (EUCAST, 2014). MG. The C. freundii isolates were pertinent to 3 different clonal groups.
Regarding P. agglomerans and K. oxytoca, the isolates were designated
to 2 clonal groups (Table 1).
2.3. Analysis of genetic diversity Through E. coli MLST analysis, the isolates belonged to 9 STs, 4 new
STs that presented 2 new alleles of dinB and icdA genes (ST629 and
For molecular typing, pulsed-field gel electrophoresis (PFGE) and ST630) and 2 new profiles (ST631 and ST632). Three different clonal
multilocus sequence typing (MLST) (in the case of E. coli) were groups by PFGE (EcE, EcK, and EcL) belonged to ST2, and 2 others
employed. On PFGE, XbaI or SmaI (for Providencia stuartii) digestion (EcG and EcH) were identified as ST43.
was used to analyze multiple isolates harboring blaKPC belonging to According to CLSI (2014) breakpoints, there were high rates of resis-
the same species (Ribot et al., 2006). Banding patterns were visually tance to most of the antimicrobials tested. Gentamicin and amikacin
inspected and subsequently analyzed with BioNumerics 6.6 software were the antimicrobials with the lowest resistance rates (39.8% and
(Applied Maths, Sint-Martens-Latem, Belgium) with Dice's coefficient 34.9%, respectively). Through E-test, most of the isolates were resistant
analysis and bandwidth tolerance set at 1.5%. Isolates with at least 80% to carbapenems, as was expected, with MIC50 ≥32 mg/L for all
of similarity were considered as the same clonal group. MLST of E. coli carbapenems tested. Individually, several species displayed lower
isolates was performed according to MLST database from Pasteur Insti- rates of MIC50, E. coli and C. freundii exhibiting the lowest MIC50
tute (http://www.pasteur.fr/recherche/genopole/PF8/mlst/EColi.html). (Table 2).
Approximately 47% of the isolates were nonsusceptible to tigecyc-
line (MIC50 = 1 mg/L and MIC range 0.125–16 mg/L) (Table 2). These
2.4. Flanking regions of blaKPC isolates were species of E. aerogenes (60.5%; 23/38), E. cloacae (52.9%;
9/17), P. stuartii (75%; 3/4), P. agglomerans (25% 1/4), C. freundii
The genetic environment of the blaKPC gene was analyzed by multi- (33.3%; 1/3), K. oxytoca (50%; 1/2), and S. marcescens (100%; 1/1).
plex PCR according to the primers described by Naas et al. (2008) except Regarding polymyxin B, 16.5% of resistance was apparent, excluding
for the amplification of the ISKpn7 region, in which the primers species intrinsically resistant (MIC50 = 0.75 mg/L and MIC range
described by Kitchel et. al. (2009) were adopted. The Tn4401 isoform 0.19–32 mg/L) (Table 2). To confirm the polymyxin B resistance, broth
was determined by ISKpn7 amplicon sequencing. The positive and microdilution (the gold standard method) was used to test these iso-
negative controls for KPC-2 were K. pneumoniae ATCC BAA 1705 and lates, and all of the isolates were still considered resistant with the
ATCC BAA 1706, respectively. same MIC values. These isolates were species of E. aerogenes (26.3%;
10/38), C. freundii (33.3%; 1/3), and K. oxytoca (50% 1/2). Of the 10
E. aerogenes isolates resistant to polymyxin B, 9 belonged to clonal
2.5. Extended spectrum beta-lactamase (ESBL) gene detection group A, representing 90% of the polymyxin-resistant E. aerogenes
strains (Table 2).
PCR and sequencing were performed to amplify and identify other In our study, the association of KPC-2 with other beta-lactamases
beta-lactamase–coding genes (CTX-M, SHV, and TEM) (Cuzon et al., was evident in 44 isolates (53%). The blaTEM gene was detected in
2010; Mendonça et al., 2007). 45.8% of the isolates. Through sequencing, 2 different allelic variants
328 C.P. Tavares et al. / Diagnostic Microbiology and Infectious Disease 82 (2015) 326–330

Table 1
Clonal groups and distribution of KPC-positive Enterobacteriaceae isolates from 9 different geographic regions of Brazil.

Species Pulsotypes and MLSTa of Enterobacteriaceae (no. of isolates per Brazilian state) Total (%)

Northeast Southeast Midwest

CE PE BA AL RJ ES MG DF GO

E. aerogenes EaH (1) EaF (6) EaA (23)b EaA (2)b 38 (45.8)
EaG (2) EaB (1)
EaC (1)
EaD (1)
EaI (1)
E. cloacae EclC (2) EclG (1) EclH (1) EclM (1) EclB (1) EclA (1) 17 (20.5)
EclJ (1) EclM (1) EclK (1) EclF (1) EclD (1)
EclL (1) EclI (1) EclE (1)
EclN (1)
EclO (1)
E. coli EcI/ST39 (1) EcJ/ST632 (1) EcA/ST629 (1) EcE/ST2 (1) EcG/ST43 (1) EcF/ST305 (2) 13 (15.7)
EcK/ST2 (1) EcB/ST630 (1) EcH/ST43 (1)
EcC/ST631 (1)
EcD/ST479 (1)
EcL/ST2 (1)
P. stuartii PsA (4) 4 (4.8)
P. agglomerans PaA (3) 4 (4.8)
PaB (1)
C. freundii CfA (1) CfB (1) CfC (1) 3 (3.6)
K. oxytoca KoA (1) KoB (1) 2 (2.4)
M. morganii 1 1 (1.2)
S. marcescens 1 1 (1.2)
Total (%) 4 (4.8) 10 (12) 2 (2.4) 1 (1.2) 13 (15.7) 5 (6) 9 (10.8) 33 (39.8) 6 (7.3) 83 (100)
a
MLST was performed only for E. coli isolates.
b
The isolates were retrieved from 8 hospitals from DF and 3 hospitals from GO between March 2010 and February 2011.

were defined, blaTEM-141 (36.8%) and blaTEM-141-like (63.2%), a novel alle- E. cloacae, P. agglomerans, C. freundii, K. oxytoca, and S. marcescens isolates
lic variant differing from the blaTEM-141 in 3 nucleotides (GeneBank ac- was observed. E. aerogenes, K. oxytoca, and C. freundii isolates resistant to
cession no. KR024889). The frequency of blaSHV detection was 6%, and polymyxin B (16.5%) were also found.
through sequencing, 4 different allelic variants were found: blaSHV-2a Resistance to tigecycline and mainly to polymyxin is very worrisome
(16.7%), blaSHV-63(16.7%), blaSHV-120 (16.7%), and blaSHV-165 (33.3%). because these drugs are one of the few options left to treat infections
The blaCTX-M genes were detected in 22.9% of the isolates, and the allelic caused by multiresistant KPC-producing bacteria. Polymyxin resistance
variants were blaCTX-M-8 (10.5%), blaCTX-M-9 (15.8%), blaCTX-M-15 (36.8%), has been witnessed in KPC-producing K. pneumoniae isolates (Lee et al.,
blaCTX-M-59 (31.6%), and blaCTX-M-97 (5.3%) (Table 2). 2009), including those from Brazil (Pereira et al., 2013). To our knowledge,
By multiplex PCR, a partial Tn4401 structure was present in all iso- this is the first report of E. aerogenes strains resistant to polymyxin B in
lates. The inverted repeats and their transposition-generated target Brazil. Most of polymyxin-resistant E. aerogenes isolates belonged to
site duplications were absent in all isolates. The tnpA region was detect- clone A. This is a worrisome fact (it may indicate the adaptation of this
ed in 48.2% of the isolates; ISKpn6, in 97.8%; and ISKpn7, in 57.8%. The 3 clone and possible spread) and mainly warrants a more judicious applica-
regions together (tnpA, ISKpn6 and ISKpn7) were detected in 31.3% of tion of this antimicrobial agent.
the isolates (n = 26). In 91.7% (44/48), there were no deletions in the The transposon Tn4401 is described to be the origin of blaKPC gene
ISKpn7 region, suggesting isoform “b”, and in 8.3% (4/44), a deletion of acquisition and dissemination. It consists of a transposase (tnpA), a
69 bp was found, suggesting isoform “d” (Table 2). resolvase (tnpR), the blaKPC gene, and 2 putative IS elements, ISKpn6
Restriction with S1 nuclease and hybridization analysis revealed that and ISKpn7 (Naas et al., 2008). In Brazil, the blaKPC gene has been asso-
blaKPC was found in plasmids in all isolates. The KPC-carrying plasmids ciated with Tn4401 variant “b” in both K. pneumoniae as well as other
varied from ~14 to 120 kb, and the most prevalent plasmids present Enterobacteriaceae species (Andrade et al., 2011; Pereira et al., 2013).
~14 kb (n = 35) and ~42 kb (n = 24) (Table 2). In 15.7% (13/83) of Although isoform “b” was also the most prevalent in this study, the
the isolates, more than 1 plasmid carrying the blaKPC gene was detected. complete transposon (tnpA, ISKpn6, and ISKpn7) was only amplified in
31.3% of the isolates (n = 26). Thus, these findings suggest the diversity
4. Discussion of the genetic environment surrounding blaKPC in the Enterobacteriaceae
isolates from Brazil.
This study describes the resistance profiles, genetic diversity, and gene- Besides the dissemination of blaKPC-2 through Tn4401, the participa-
tic environment of the blaKPC-2 gene among 9 different Enterobacteriaceae tion of epidemic clones is being described in the dispersion of this gene.
species isolated from Brazil, during a 2-year study. Since 2009, there has There is an epidemic clone of K. pneumoniae delineated worldwide,
been an ever widespread of KPC-producing K. pneumoniae in several identified as ST258 by MLST. In Brazil, the dissemination of 2 major
Brazilian states (Pereira et al., 2013; Seki et al., 2011). Beyond the dis- clones in K. pneumoniae (ST437 and ST11) related to ST258 was also
semination of K. pneumoniae, KPC in other Enterobacteriaceae species identified (Pereira et al., 2013).
has also been recorded (Petrella et al., 2008). In our study, there was a In this study, through PFGE analysis, we observed clonal spread of
KPC production rate of 21.4% in carbapenem-nonsusceptible isolates. some species in some Brazilian states. Despite this, for now, no preva-
All of the isolates produced KPC-2, the most reported variant in Brazil lent clone was considered responsible for the spread of KPC in NKPE
and throughout the world (Walsh, 2010). species in Brazil.
All of the isolates were nonsusceptible to at least 1 of the carbapenems, Regarding E. coli isolate MLST analysis, 2 isolates that belonged to ST43
and 2 isolates were resistant to all of the antimicrobials tested except to were found, which is equivalent to ST131 on the UoW (MLST scheme of
tigecycline (1 of the isolates was nonsusceptible) and polymyxin B. University of Warwick, Warwick Medical School, Coventry, UK)
A high rate of resistance to tigecycline (45.6%) among E. aerogenes, (Matsumura et al., 2012). This ST has been described as highly virulent
Table 2
Susceptibility profile and molecular characteristics of all KPC-2–producing isolates studied.

Species Antimicrobials Allelic variants of ESBL genes Size of KPC- Tn4401


plasmid (n) (% isolates positive)
No. of isolates resistant or intermediary MIC50 (range)
(disk diffusion)

C.P. Tavares et al. / Diagnostic Microbiology and Infectious Disease 82 (2015) 326–330
CAZ CTX FEP ATM SXT CIP AMI GEN IPM MER ERT TGC PB blaSHV (n) blaTEM (n) blaCTX-M (n) Neg Most tnpA ISKpn6 ISKpn7
frequent isoform
(range)

E.ae 38 38 38 38 24 37 27 11 ≥32 ≥32 ≥32 1.5 0.75 SHV-120 (1) TEM-141 (3) CTX-M-59 (6) 18 24 kb (29) 28.9 97.4 “b” – 57.9
(n = 38) (0.38 to ≥32) (0.38 to ≥32) (0.38 to ≥32) (0.125–16) (0.38–32) TEM-141-like (10) CTX-M-8 (1) (14–88 kb) “d” – 2.6
CTX-M-97 (1) Neg – 39.5
CTX-M-15 (1)
E.cl 16 17 17 17 12 11 8 11 ≥32 12 ≥32 1 0.75 SHV-2a (1) TEM-141 (7) CTX-M-8 (1) 2 42 kb (7) 56.3 100 “b” – 64.7
(n = 17) (0.5 to ≥32) (0.047 to ≥32) (0.047 to ≥32) (0.5–4) (0.19–2) TEM-141-like (8) CTX-M-9 (2) (14–120 kb) Neg – 35.3
CTX-M-15 (6)
CTX-M-9 (1)
E.co 8 12 11 12 6 10 3 5 12 4 4 0.19 0.75 TEM-141 (4) 8 42 kb (8) 78.6 100 “b” – 61.5
(n = 13) (3 to ≥32) (0.38 to ≥32) (0.75 to ≥32) (0.19–1) (0.5–2) TEM-141-like (1) (14–60 kb) Neg – 38.5
P.st 0 4 4 4 3 4 4 3 ≥32 4 6 1.5 NE 4 14 kb (4) 100 100 Neg – 100
(n = 4) (4 to ≥32) (0.75 to ≥32) (1.5 to ≥32) (1–2)
P.ag 4 4 4 4 1 4 2 3 ≥32 ≥32 ≥32 1 0.32 SHV-63 (1) TEM-141-like (4) 42 kb (3) 75 100 “b” – 25
(n = 4) (24 to ≥32) (≥32) (≥32) (0.75–3) (0.25–1.5) SHV-165 (2) (24–42 kb) “d” – 75
C.fr 3 3 3 3 1 2 0 0 0.75 0.25 6 1 1 3 42 kb (2) 66.7 66.7 “b” – 33.3
(n = 3) (0.75) (0.25) (4 to ≥32) (0.5–6) (0.5–12) (18–42 kb) Neg – 66.7
K.ox 2 2 2 2 2 2 1 0 0.25 to ≥32 0.19 to ≥32 6 to ≥32 0.5–2 0.38–12 TEM-141-like (1) 1 24–42 kb 0 100 “b” – 50
(n = 2) Neg – 50
c
M.mo 0 1 1 1 1 1 1 1 ≥32 2 1.5 0.75 NE 1 14–24 kb 100 100 Neg – 100
(n = 1)
S.ma 1 1 1 1 1 0 1 1 ≥32 ≥32 ≥32 2 NEc 1 24–88 kb 100 100 Neg – 100
(n = 1)
All (%) 86.7 100 83.1 97.6 61.4 85.5 57.8 42.2 ≥32 ≥32 ≥32 1 0.75 5 38 19 37 14 kb (35) 48.2 97.8 “b” – 53
(0.25 to ≥32) (0.047 to ≥32) (0.047 to ≥32) (0.125–16) (0.19–32) (6.0%) (45.8%) (22.9%) (44.6) 42 kb (24) “d” – 4.8
(14–120 kb) Neg– 42.2

E.ae = E. aerogenes; E.cl = E. cloacae; E.co = E. coli; P.st = P. stuartii; P.ag = P. agglomerans; C.fr = C. freundii; K.ox = K. oxytoca; M.mo = M. morganii; S.ma = S. marcescens; CAZ = ceftazidime; CTX = cefotaxime; FEP = cefepime;
ATM = aztreonam; SXT = trimethoprim/sulfamethoxazole; CIP = ciprofloxacin; AMI = amikacin; GEN = gentamycin; IPM = imipenem; MER = meropenem; ERT = ertapenem; TGC = tigecycline; PB = polymyxin B; NE = not evaluated.

329
330 C.P. Tavares et al. / Diagnostic Microbiology and Infectious Disease 82 (2015) 326–330

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A part of this study was presented at the 51st Annual Interscience 2009;53:3365–70.
Lee J, Patel G, Huprikar S, Calfee DP, Jenkins SG. Decreased susceptibility of polymyxin B
Conference on Antimicrobial Agents and Chemotherapy, Chicago, IL, during treatment for carbapenem resistant Klebsiella pneumoniae infection. J Clin
USA, 2011, and at the XXVI Latin American Microbiology Conference, Microbiol 2009;47:1611–2.
Santos, SP, Brazil, 2012. Matsumura Y, Yamamoto M, Nagao M, Hotta G, Matsushima A, Ito Y, et al. Emergence and
spread of B2-ST131-O25b, B2-ST131-O16 and D-ST405 clonal groups among
extended-spectrum-β-lactamase-producing Escherichia coli in Japan. J Antimicrob
Author disclosure statement Chemother 2012;67:2612–20.
Mendonça N, Leitão J, Manageiro V, Ferreira E, Caniça M. Spread of extended-spectrum β-
lactamase CTX-M-producing Escherichia coli clinical isolates in community and noso-
All authors report no conflicts of interest relevant to this article. comial environments in Portugal. Antimicrob Agents Chemother 2007;51:1946–55.
Miriagou V, Tzouvelekis LS, Rossiter S, Tzelepi E, Angulo FJ, Whichard JM. Imipenem resis-
tance in a Salmonella clinical strain due to plasmid-mediated class A carbapenemase
Funding
KPC-2. Antimicrob Agents Chemother 2003;47:1297–300.
Monteiro J, Santos AF, Asensi MD, Peirano G, Gales AC. First report of KPC-2-producing
This work was funded by research grants from Conselho Nacional de Klebsiella pneumoniae strains in Brazil. Antimicrob Agents Chemother 2009;53:
333–4.
Desenvolvimento Científico e Tecnológico, Fundação Carlos Chagas de
Naas T, Cuzon G, Villegas MV, Lartigue MF, Quinn JP, Nordmann P. Genetic structures at
Amparo à Pesquisa, and Instituto Oswaldo Cruz. the origin of acquisition of the beta-lactamase blaKPC gene. Antimicrob Agents
Chemother 2008;52:1257–63.
Nordmann P, Naas T, Poirel L. Global spread of carbapenemase-producing Enterobacteriaceae.
Ethical approval Emerg Infect Dis 2011;17:1791–8.
Peirano G, Seki LM, Passos VLV, Pinto M, Guerra LR, Asensi MD. Carbapenem-hydrolysing
The study was approved by Fiocruz Ethical Committee and Brazilian β-lactamase KPC-2 in Klebsiella pneumoniae isolated in Rio de Janeiro, Brazil. J
Antimicrob Chemother 2009;63:265–8.
National Committee for Research Ethics under the reference number
Pereira PS, Araujo CFM, Seki LM, Zahner V, Carvalho-Assef AP, Asensi MD. Update of the mo-
CAAE-000012/011-02. lecular epidemiology of KPC-2-producing Klebsiella pneumoniae in Brazil: spread of
clonal complex 11(ST11, ST437 and ST340). J Antimicrob Chemother 2013;68:312–6.
Petrella S, Ziental-Gelus N, Mayer C, Renard M, Jarlier V, Sougakoff W. Genetic and struc-
Acknowledgments tural insights into the dissemination potential of the extremely broad-spectrum class
A beta-lactamase KPC-2 identified in an Escherichia coli strain and an Enterobacter
We thank the following microbiologists who provided some of the cloacae strain isolated from the same patient in France. Antimicrob Agents
Chemother 2008;52:3725–36.
strains: Ivoneide Barroso, Maria Iracema Patricio, Valdelúcia Cavalcanti, Ribot EM, Fair MA, Gautom R, Cameron DN, Hunter SB, Swaminathan B, et al. Standardi-
Letiano da Silva, and Maria Pia from the Public Health Laboratories of zation of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia
Alagoas, Ceará, Pernambuco, Piauí, and Rio de Janeiro, respectively. coli O157:H7, Salmonella, and Shigella for PulseNet. Foodborne Pathog Dis 2006;3:
59–67.
We also thank the Genomic Platform for DNA Sequencing PDTIS
Sambrok J, Russel DW. Molecular cloning: a laboratory manual. 3rd ed. New York: Cold
(Instituto Oswaldo Cruz) and the Institute Pasteur MLST database cura- Spring Harbor Laboratory Press; 2001.
tors for coding the MLST alleles and profiles for E. coli. Seki LM, Pereira PS, de Souza MP, Conceição MS, Marques EA, Porto CO, et al. Molecular
epidemiology of KPC-2- producing Klebsiella pneumoniae isolates in Brazil: the
predominance of sequence type 437. Diagn Microbiol Infect Dis 2011;70:274–7.
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