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ISOENZYMES
HOLOENZYMES
PROENZYMES OR ZYMOGEN
5. Isomerases
Catalyze the intramolecular
arrangement of the substrate
compound
e.g. Glucose phosphate isomerqase,
and Ribose phosphate isomerase
A→B
ENZYME KINETICS
6. Ligases
A chemical reaction may occur
Catalyze the joining of two substrate
spontaneously if the free energy or
molecules, couples with breaking of the
available kinetic energy is higher for the
pyrophosphate bond in the ATP or
substrate than the product
similar compound.
e.g. Synthases
Enzyme catalyze physiologic reactions
AB + C → A - C + B
by lowering the activation energy level
ENZYME CLASSIFICATION NOMENCLATURE that the substrate must reach for the
reaction to occur
E + S → ES → E + P
CATALYTIC MECHANISM
o Absolute Specificity
o Group Specificity
o Bond Specificity
o Steriosometric Specificity
1) ENZYME CONCENTRATION
Enzymes that combines with only 1
The higher the enzyme concentration,
optical isomer
the faster is the reaction, because more
ENZYME REACTION enzyme is present to bind with the
substrate
Zero-order reaction – the reaction rate
depends only on enzyme 2) SUBSTRATE CONCENTRATION
concentration; independent on With the amount of enzyme exceeding
substrate concentration the amount of a substance, the reaction
rate steadily increases as more
First-order reaction – the reaction rate substrate is added.
is directly proportional to substrate However, when the substrate
concentration; independent on enzyme concentration reaches as maximal
concentration value, higher concentration of substrate
no longer result in increased rate of
reaction (saturation kinetics.)
ENZYME ACTIVITY
UNITS FOR EXPRESSING ENZYMATIC ACTIVITY:
Enzymes are measured in terms of:
1) INTERNATIONAL UNIT (IU or U)
1. Change in the substrate concentration
1 micromole of substrate/minute
2. Change in the product concentration
3. Change in coenzyme concentration
2) KATAL UNIT (KU)
1 mole of substrate/second
Enzymes are quantitated based on
their activity rather than absolute A. COMPETITIVE INHIBITOR
values. Physically binds to the active site of
The units used to report enzyme an enzyme.
levels are activity units. Reversible (Substrate > Inhibitor)
The definition for activity unit must Substrate concentration ↑ than the
consider change in pH, concentration of inhibitor will still
temperature, substrate, etc., proceed, called REVERSIBLE.
3) COFACTORS
Non-protein entities that must bind
to particular enzymes before a
reaction occurs.(no cofactor, no
reaction)
A. COENZYMES- Organic compound;
essential to achieve absolute
enzymatic activity and increasing its
concentration will increase the
velocity of an enzymatic reaction
B. NON-COMPETETIVE INHIBITOR
E.g. Nicotinamide Adenine
It does not compete with the
Dinucleotide (NAD), Nicotinamide
substrate but look for areas other
Adenine Dinucleotide Phosphate
than the active site.
(NADP)
Binds to the allosteric site (cofactor
site)
B. ACTIVATORS- Inorganic Ions;
Irreversible
alters spatial configuration of the
enzymes for proper substrate
E.g. Calcium, Zinc, Chloride,
Magnesium, Potassium
--sabi ni ma’am organic ions, sabi ni
rodriguez notes inorganic. --
C. UNCOMPETITIVE INHIBITOR
4) INHIBITORS
The inhibitor binds to the enzyme-
Enzymatic reactions may not
substrate (ES) complex.
progress if an inhibitor interferes
Increasing the substrate
with the reaction; (interferes with
concentration results in more
the enzymatic reactions)
enzyme substrate complex to which there will be a two-fold increase in
the inhibitor binds thereby enzyme activity.
increases the inhibition Repeated freezing and thawing tends to
↑Substrate concentration= ES = ↑ denature proteins and should be
Inhibitor/inhibition avoided.
Low temperature renders enzymes
reversibly inactive-
refrigerated/freezing temperature.
Pipette into cuvette 25°C, 30°C, 37°C Men 50-190 61-232 80-306
Sample 20ul
Working reagent 1000ul
(previously prepared) Children up to 15 up to 400 up to 488 up to 644
Mix, read the absorbance after 1 min. y/o
and at the same time start the Children up to 17 up to 300 up to 366 up to
stopwatch. Read absorbance again y/o 483
exactly 1, 2, and 3 minutes.
RESULT.CALCULATION:
NOTE: during the reaction-nitrophenol is
CALCULATION: from the readings,
produced. This substance is poisonous when
calculate the mean absorbance change
inhaled, swallowed or when absorbed through
per minute (A/min.)
the skin. It comes into contact with skin or
Calculate the alkaline phosphatase
mucous membranes, wash thoroughly with
activity in the sample using the
water and consult a doctor
following factor:
VIDEO: SLIDE NUMBER 31 (ALP VIDEO-5:37)
U//l = ▲ A/min. x 3433 (procedure 1w/ reagent
2:02:00-2:08:17
start)
ACID PHOSPHATASE (ACP) E.C.3.1.3.2
U/l = ▲ A/min. x 2757 (procedure 2 w/ sample
start) AKA: E.C. 3.1.3.2 or Orthophosphoric-
monoester phosphohydrolase
Conversion factor from traditional units
It catalyzes the same reaction made by
(U/I) in SI-units (kat/I)
ALP, except that it is active at pH 5.0
1U/I = 16.67 x 10-3 ukat/l
Major tissue sources: prostate (major
1 ukat/l = 60 U/I4
source), RBC, platelets, liver and bone.
ACP is classified based on acidic pH it
works at and based on source:
BASED ON PH
o PH 6.0- found in RBC
o PH 5.0- found in prostate,
spleen, and kidney
BASED ON SOURCE (ISOENZYME) RBC ACP inhibited by cupric ions and
formaldehyde
o Prostatic ACP- found in
REFERENCE RANGE:
prostate gland, strongly
inhibited by dextrorotary TOTAL ACP: Male: 2.5-11.7 u/L
tartrate ions. Function is mainly Female: 0.3-9.2 u/L
to preserve spermatozoa and PROSTATIC ACP: Male:0.2-5.0 u/L
protects them from phagocytic Female0.0-0.8 u/L
activity of female genital tract. ACP METHODS
o Non-prostatic ACP (TR-ACP)-
METHODS SUBSTRATES END PRODUCTS
found in other tissues, cannot
be inhibited by tartrate but 1. GUTMAN AND Phenyl PO4 Inorganic PO4
inhibited by formaldehyde and GUTMAN
cupric ions. 2. SHINOWARA PNPP p-nitrophenol
Unstable in ph 7.0 or > 7.0; temperature
> 37°C 3. BABSON, READ, Alpha napthyl PO4 Alpha-naphtol
To stabilize enzyme activity, acidify AND PHILIPS
serum specimen in ph below 6.5
ACP used in forensic clinical chemistry 4. ROY AND Thymolphthalein Free
in investigation of great cases. HILLMAN MonoPO4 thymolpthalein
ISOENZYME: Things to remember:
ACP ISOENZYMES TISSUE SPECIFICITY Separate red cell to the serum asap to
prevent the leakage of erythrocyte and
Band 1 Prostate Platelet ACP
Band 2 Granulocyte Serum activity is decreased within 1-2
Band 3 Plasma ( Platelets, hours if the sample is left at room
Erythrocytes and
temperature without the addition of
Monocytes)
preservatives. Results of increased ph
Band 4 Granulocytes
Hemolysis should be avoided;
Band 5 Osteoclast
contamination from erythrocyte ACP;
SUBSTRATES:
Low result of ACP due to improper
o Thymophthalein
anticoagulant
monosphosphate –quantitative
endpoint reaction ACP-CLINICAL SIGNIFICANCE
o A-naphthyl PO4 –continous
monitoring methods Prostate cancer
Prostatic ACP is inhibited by 20mM L- Benign Prostatic Hypertrophy
tartrate ions while 1mM cupric sulfate Paget Disease
and 2% formaldehyde ions inhibit red Breast Cancer with bone metastases
cell ACP Gaucher Disease
Platelet Damage
Idiopathic Thrombocytopenia 1-naphthol + FRTR-salt (ACP)→ azo dye
SAMPLE PREPARATION:
o Stabilize samples, AUTOCAL,
and Controls by addition of one
1-naphthyl phosphate + H2O (ACP)→phosphate
drop of stabiliser to 1 ml sample
+ 1napthol
immediately after
separation/reconstitution. REFERENCFE VALUE:
Samples will remain stable for 3
days at 2-8°C. 21 hours at 15- TOTAL ACID PHOSPHATASE
Assay temperature 37°C
25°C (room temperature)
Men up to (U/I) 6.6
ASSAY:
Women up to (U/I) 5.5
o Wavelength: Hg 405nm
o Optical path: 1cm
o Temperature: 37°C (ACP ASPARTATE AMINOTRANSFERASE (AST)
active @ this temp.) E.C.2.6.1.1
o Measurement: against air ( ↑
AKA: E.C. 2.6.1.1 OR L-Aspartate 2-
absorbance)
Oxoglutarate Aminotransferase or
Warm working reagent and cuvettes up
aspartate transaminase. Formerly
to desired temperature (37°C).
known as SGOT (serum glutamic-
Temperature must be kept constant
oxaloacetic transaminase)
(+/- 0.5°C) for the duration of the test.
Is involved in the transfer of an amino
SEMI MICRO METHOD
group between aspartate and a-keto
Pipette into Cuvette
acids with the formation of
SAMPLE 100ul oxaloacetate and glutamate
WORKING REAGENT 1000ul It has 2 isoenzyme fractions, cytoplasm,
and mitochondrial ASTs – the
Mix, read the absorbance A1 after 5 cytoplasmic isoenzyme is the
minutes and start the stopwatch at the predominant form in serum
same time. Major tissue source: cardiac tissue,
Read the absorbance A2 exactly after 3 liver, and skeletal muscle
minutes at 37°C Other sources: kidney, pancreas, and
A2 – a1 = a RBC
REFERENCE VALUE: 5-37 U/L
CALCULATION: ISOENZYYME FRACTIONS:
Calculate the total acid phosphatase o Cytoplasmic AST- predominant
activity in the sample using the form in serum
following factor. o Mitochondrial AST- 5-10% of
total AST
U/I 37°C METHODS:
Total Acid 248 o Karmen Method/Couple
Phosphatase (A)
Enzyme assay
(multiply)
o Reitman and Frankei
CONVERSION:
o 1 U/I = 16.67 X 10-3 UKAT/L
o 1 UKAT = 60 U/I
Coupled enzyme assay (Karmen AST is also used in monitoring therapy
Method) pH level 7.5 with wavelength with potentially hepatotoxic drugs, a
340nm result 3x of upper border of normal
o It uses malate dehydrogenase sensation of therapy.
(MD) and monitors the change
in absorbance at 340 nm
ASPARTATE AMONITRANSFERASE-
EXPERIMENT
MATERIALS:
Wavelength 25°C, 30°C 37°C
BUFFER/ ENZYME REAGENT Hg 334nm 972 1780
o TRIS Buffer (pH7.4) 125mmol/l 340nm 952 1745
o L-alanine 625mmol/l Hg 365nm 1765 3235
Conversion factor from traditional
o LDH 1.5kU/I
units (U/I) in SI-units (kat/I)
o Sodium azide 0.095%
1 U/I=16.67X10^-3ukat/I 1ukat/I = 60U/I
SUBSTRATE
o 2- oxaglutarate 75mmol/l VIDEO: SLIDE NUMBER 49 (AST VIDEO -4:50)
o NADH 0.9mmol/l 2:44:45-2:49:17 – same lang ang AST at ALT
o Sodium Azide 0.095% process, watch mo ulet if u want, only the
difference is the substrate because diffuse
SPECIMEN
Note: if the absorbance change per
o Serum, heparinized plasma or EDTA
minute (A/min.) or the activity exceed,
plasma
dilute 0.1ml of the sample with 0.9ml
o Avoid Hemolysis
physiological saline (0.09%) and repeat
o Loss of activity within 3 days at 4°C:
the assay using this dilution. Multiple
10% at 20-25°C: 17%
the results by 10.
AMYLASE- EXPERIMENT
2. AMYLOCLASTIC
It measures amylase activity by METHOD, PRINCIPLE, & MATERIALS
following the decreases in substrate
concentration (degradation of METHOD: Caraway Method, Modified
starch)
MATERIALS/RAGENTS:
BUFFER:
Pipetting scheme
METHODS:
NOTES-TO REMEMBER:
1) TANZER-GILBARG ASSAY
(FORWARD/DIRECT METHOD) – pH Adenylate Kinase (AK ) released after red
9.0;340nm cell lysis interferes with CK assay
particularly with hemolysis of > 320 mg/L
Liver cells and RBC do not contain CK
To increase both the sensitivity and the
specificity of CK-MB in the diagnosis of
acute AMI, it has been found necessary to
perform serial determinations of MB
Creatine + ATP --CPK--→ Creatine PO4 + ADP fraction (at 3- to 4- hour intervals over a 12-
to 16 hour period) that show a progressive
ADP + phosphoenolpyruvate ←--PK--→ Pyruvate + ATP rise that reaches a peak, followed by a fall
to low levels.
Pruvate + NADH ←- LD-→ Lactate + NAD
Adenosine monophosphate (AMP) is added
2) OLIVER-ROSALKI to the reverse method to inhibit AK which
(REVERSE/INDIRECT METHOD) may be present in the serum from
hemolysis – AK hydrolyzes ADP
N-acetylcysteine is added to CK reagent to
activate the enzyme (aside from Mg+2) and
partially reversed the inhibition of oxidized
sulfhydryl groups.
Imidazole serves as a buffer; urate and
Creatine PO4 + ADP ←- CPK--→ Creatine + ATP cysteine are potent CK inhibitors.
CK is light and pH sensitive; it is also lost
ATP + glucose ←- *HK--→ ADP + glucose-6-PO4
with excessive storage.
Glucose-6-PO4+NADP ←-G6PD-→ ^-phosphogluconate + Cleland’s reagent and glutathione – partially
NADPH restore lost activity of CK
CK mass units assay are more sensitive than
AMI MARKERS: electrophoresis, but electrophoresis is still
the reference method for CK
AMI ONSET PEAKS AT NORMALIZE
MARKER AT
METHOD, PRINCIPLE, & MATERIALS
CK-MB 3-12 hrs. 18-24 hrs 48-72 hrs
MYOGLOBIN 2-3 hrs. 9-12 hrs 24 hrs CK-MB NAC ACTIVATED
PROCEDURE:
SEMI-MICRO
Hg 334nm 8414 x A/min
340nm 8254 x A/min.
Hg 365nm 14858 x A/min.
Conversion factor units (U/I) in SI units
(kat/I)
QUALITY CONTROL
HYPONATREMIA:
HYPONATREMIA W/ NORMAL RENAL FUNCTION
low-serum sodium level; below normal CAUSE Urine Serum K
value Osmolality
1.Overhydration Low Normal or Low
the most common electrolyte disorder,
2.Diuretics Low Low
defined as reduced plasma sodium 3.SIADH High Normal or Low
concentration to a value less than 135 4.Adrenal failure Highi High
mmol/L 5.Bartter’s Syndrome Low Low
6.Diabetic normal High
CAUSED BY: Hyperosmolarity
over hydration, use of diuretics,
syndrome of inappropriate ADH (SIADH) HYPERNATREMIA:
Aldosterone deficit secondary to
Addison’s disease. Serum sodium concentration above the
BARTTER’S SYNDROME: It is a rare upper limit of the reference interval
condition wherein sodium chloride Caused by loss of water, gain of sodium,
(NaCl) gradients cannot form in the loop or both
of Herle causing the ret4ention of It usually results from excessive water
chloride ion that is not available for the loss
countercurrent; hyponatremia is not ELEVATION IN CONDITIONS:
corrected with fluid restriction. dehydration; diabetes insipidus;
PSEUDOHYPONATREMIA: condition hyperaldosteronism;
characterized by falsely elevated serum hyperadrenocorticism
Sodium level usually cause by the
presence of excess lipids in the serum;
reduction in serum concentration
caused by a systematic error in
measurement
.
ANALYTICAL METHODS: o Another electrode- measuring
electrode
SPECIMEN: serum, plasma, and urine; whole o The difference in potential
blood (depends on analyzer) between the reference and
PLASMA- Lithium heparin, ammonium heparin, measuring electrodes can be
and Lithium oxalate for anti-coagulant used to calculate the
“concentration” of the ion in
Haemolysed sample can cause decreased solution.
sodium level Most analyzers use a glass ion-
exchange membrane in its ISE system
URINE must be 24-hr collection
for Na+ measurement.
Sweat can also be used in the analysis
Types Of ISE Measurement
ION SELECTIVE ELECTRODE (ISE)- most Direct Method Provides an undiluted
-Commonly used- sample to interact with
routinely used method in clinical
the ISE membrane
laboratories
ATOMIC ABSORPTION Indirect Method Diluted sample is used
SPECTROPHOTOMETRY (AAS) for measurement
FLAME EMISSION No significance in result except if the sample is
SPECTROPHOTOMETRY (FES)/FLAME hyper lipidemic or hyper proteinemia; excess
EMISSION PHOTOMETRY (FEP) protein and lipids present in the serum because
CHEMICAL METHODS outdated due to displace water that can cause decreased result
lack of precision
COLORIMETRY (Albanese and Lein)
REFERENCE LEVEL:
A. TOTAL MAGNESIUM
a. AAS (Reference method) – PHOSPHOROUS* other book uses phosphate*
routinely done in the clinical
laboratory An important constituent in nucleic
b. Photometric method on acid, phospholipid and
automated analyzers phosphoproteins.
c. These methods employ It forms high energy compounds such as
metallochromic indicators or ATP and cofactor (NADP) and is involved
dye like calgamite, formazan in intermediary metabolism and
dye, magon, and titan yellow various enzyme system
dye. Essential for muscle contractility,
neurologic function, electrolyte
B. IONIZED (FREE) MAGNESIUM: ISE FOR transport, and oxygen carrying by
MAGNESIUM hemoglobin.
In blood, organic phosphate is located
C. INTRACELLULAR MAGNESIUM in the red cells, while plasma contains
a. Flourescence measurement the inorganic ones.
using Furapate (Magnesium In serum, 65% is free, 10% is bound to
binder) protein such as albumin and 35% is
b. Nuclear magnetic resonance complexed with sodium, calcium, and
Spectroscopy magnesium
c. Electro probe microanalysis Only organic phosphorus is measured
d. ~Intracellular magnesium routinely
measurement are not currently
DISTRIBUTION:
employed in clinical lab;
research purposes 85% of the total body phosphorus is
present in the skeleton and remaining
DYE BINDING METHODS 15% is in the extracellular fluid (ECF)
and soft tissue.
Calgamite ( reddish violet complex at 532 nm)
The skeleton contains primarily
Formazan ( Blue complex at 660nm) inorganic phosphates.
Soft tissues contain primarily organic
Methylthymol Blue ( 600nm) phosphates
O-cresolpthalein complexone ( 570 nm)
In blood, phosphate is located in red Phosphate + ammonium molybdate →
cells; plasma contains organic phosphomolybdate complex (measured at
phosphate direct UV absorption @ 340 nm)
ANION GAP
T4 = DIT + DIT
STIMULATION OFTHYROID-STIMULATING
TETRAIODOTHYRONINE/THYROXINE (T4) HORMONE (TSH)
7) TURNER’S SYNDROME
Short stature. “webbed neck” low
hairline on the neck and broad
shield-like chest
Amenorrhea with increased levels
of FSH and LH
8) VIRLIZATION
Secondary male sexual
characteristic are acquired by a
female. Result of adrenal
dysfunction or hormonal
medication
9) ZOLLIGER-ELLISON SUNDROME
Severe peptic ulcer of the stomach
MODULE 4- LABORATORY or PP CELLS) – producing
pancreatic polypeptide (5%
PANCREATIC HORMONES of all islet cells)
Islets of Langerhans play a crucial role in
PANCREAS
carbohydrate metabolism and so in a
plasma glucose concentration. It
involves:
o GLYCOLYSIS – the anaerobic
conversion of glucose to
lactate. Occurs in the red blood
cells, renal medulla and skeletal
muscles.
o GLYCOGENESIS – the synthesis
of glycogen from glucose.
Digestive gland in the Glucose is stored (in liver,
gastrointestinal system. muscle) in the form of glycogen
Both an endocrine and exocrine and this serves to maintain a
gland constant plasma glucose
o ENDOCRINE GLAND – concentration
insulin, glucagon, and o GLYCOGENOLYSIS- the
somatostatin breakdown of glycogen to
o EXOCRINE GLAND - glucose
amylase and Lipase; o GLUCONEOGENESIS- the
Digestive enzymes production of glucose from
The specialized tissue called islets non-sugar molecules (amino
of Langerhans acids, lactate, glycerol)
Islets of Langerhans represent o LIPOLYSIS- the breakdown of
approximately 1-2% of the pancreas triacylglycerols into glycerol and
TYPES OF CELLS ARE RECOGNIZED fatty acids.
IN THESE ISLETS: o LIPOGENESIS- the synthesis of
o A CELLS (alpha) – Producing triaglycerols.
glucagon (25% of all islets
FUNCTIONS OF PANCREAS
cells)
o B CELLS (beta)– producing Pancreatic hormones are responsible
insulin (60% of all islets for storage of fat and glucose, as
cells) glycogen, after meal
o D CELLS (delta)– producing Enables the mobilisation of energy
somatostatin (10% of all reserves as a result of food deprivation,
islet cells) stress, physical activity
o F CELLS (known now as Maintain the constant plasma glucose
PANCREATIC POLYPEPTIDE concentration.
Promote growth
PANCREATIC HORMONE
PANCREATIC ENZYMES
Amylase
Lipase
PROGESTERONE
ESTRONE (E1):
o most abundant estrogen in Carbon-21 compound in the steroid
post-menopausal women family
Produced by the Lutein cells of the
ESTRADIOL (E2): corpus luteum in the female
o most potent estrogen secreted Prime secretory product of ovary.
in ovary, major estrogen;
Dominant hormone responsible for the
o most abundant in
luteal phase cycle among females.
premenopausal women; low
Single best hormone in the
levels in menopausal stage;
determination of ovulation if occurred.
o synthesized from testosterone
Prepares the uterus for pregnancy and
then diffuses out of the thecal
lobules of breast for lactation
cells of the ovaries in female;
Intermediate in the synthesis of adrenal
o precursors of E1 and E3
steroids and androstenedione.
o used to assess ovarian
DEFICIENCY: failure of implantation of
functions; serves as negative
embryo
feedback for FSH
METABOLITES: pregnanediols (easiest
o TRANSPORT PROTEIN: albumin
measured metabolite), pregnanediones,
(60%); SHBG (38%)
pregnanalones
o Free form of E3 is
approximately 2% SPECIFIC TESTS:
Low Insulin
Sex Hormones
A. Total testosterone
Materials
Procedure
A. Total testosterone
B. Free Testosterone
XENOBIOTICS
MERCURY IRON