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    Wei Chen
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    The document is a data report containing a hierarchical cluster dendrogram showing the relationships between 70 samples labeled OSD and RA based on their distances. The dendrogram groups the samples into clusters with the most similar samples linking together at shorter heights on the y-axis.

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    cil

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    20181016

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    The document is a data report containing a hierarchical cluster dendrogram showing the relationships between 70 samples labeled OSD and RA based on their distances. The dendrogram groups the samples into clusters with the most similar samples linking together at shorter heights on the y-axis.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
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    14 views6 pages

    Data Report

    Uploaded by

    Wei Chen
    The document is a data report containing a hierarchical cluster dendrogram showing the relationships between 70 samples labeled OSD and RA based on their distances. The dendrogram groups the samples into clusters with the most similar samples linking together at shorter heights on the y-axis.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Flag for inappropriate content
    of 6

    Data

    report
    2018/10/16
    Height

    0.2 0.4 0.6 0.8 1.0

    OSD197
    OSD58
    OSD95
    OSD24
    OSD76
    OSD77
    OSD94
    OSD99
    OSD199
    OSD81
    OSD110
    OSD168
    OSD111
    OSD20
    OSD182
    OSD184
    OSD185
    OSD114
    OSD133
    OSD171
    OSD170
    OSD177
    OSD173
    OSD172
    OSD174
    OSD62
    RA100309
    RA100324
    RA100422
    RA100506
    RA090403
    RA100407
    RA110328
    RA110412
    RA090914
    RA110711
    RA100819
    RA110808
    RA110921
    RA101001
    RA101015
    RA090518
    RA090602

    dist.mat
    OSD2
    RA110624
    OSD71

    hclust (*, "complete")


    RA111205
    Cluster Dendrogram

    RA111219
    RA100111
    RA101129
    RA090120
    RA110113
    RA110128
    RA090107
    RA100125
    RA090306
    RA090205
    RA090218
    RA100208
    RA100219
    RA110314
    RA110211
    RA110225
    OSD132
    OSD102
    OSD169
    OSD47
    OSD70
    OSD49
    OSD64
    OSD131
    OSD30
    OSD43
    OSD91
    OSD88
    RA110725
    RA110823
    OSD164
    RA100607
    OSD35
    OSD36
    OSD108
    OSD107
    OSD109
    2
    3
    DataSet_ciliates_n_NMDs_jaccard_Oct

    OSD76

    OSD77 OSD199

    OSD20
    OSD114

    OSD43

    OSD99 OSD24

    OSD133
    2

    OSD168 OSD197

    OSD94

    OSD58 OSD71
    OSD95
    RA101129
    RA111205
    RA100422
    RA100407
    RA100607
    RA100819
    RA101015 RA100208
    RA090120 RA090205
    RA110808
    RA111219
    RA101001
    RA100125
    RA090107 RA090306
    RA100219
    OSD2 RA110921 RA110314 RA100309
    RA110128
    RA110225
    RA110211
    RA090518
    OSD70 RA100506
    RA090914 RA100111
    RA110412
    RA090403
    RA110328
    RA110113
    RA110823RA110624 RA100324
    RA090218
    RA110711
    RA110725
    RA090602
    0
    OSD102

    Type
    NMDS2_j

    OSD62 OSD182 a ASTAN


    OSD131
    OSD81 OSD184 a OSD
    OSD164
    OSD64

    OSD35 OSD88 OSD185


    OSD177
    OSD110 OSD170
    OSD47 OSD172

    OSD36
    OSD49 OSD173

    OSD174
    −2 OSD169 OSD171

    OSD109

    OSD91

    OSD30
    OSD108
    OSD107
    OSD132

    −4

    Stress = 0.211 OSD111

    −4 −2 0 2
    NMDS1_j

    4
    SECS - abundance

    cr2262_201709 cr2243_201706
    120 300

    100 250
    Ciliate (cells L-1)

    80 200 Tonton

    60 150 Tintin

    Strom
    40 100
    Choreo
    20 50

    0 0
    st1 st3 st5 st11 st1 st3 st5 st9 st11

    cr2317_201808
    120

    100
    Ciliate (cells L-1)

    80 Tonton

    60 Tintin

    Strom
    40
    Choreo
    20

    0
    st1 st3 st9 st11

    5
    SECS – single cell sequencing

    (Lara et al., 2007)

    2nd PCR Gel sequencing ciliates


    14 9 7 3

    Uncultured ciliate clone BBL1SF10.57 18S ribosomal RNA gene KC488367.1


    Uncultured eukaryote clone /Strombidium triquetrum(617/668(92%)) KF129853.1/KJ609052.1

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