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Biochem Case Conferences
Biochem Case Conferences
Biochemistry Finals
OLFU MEDICINE
ANDROID TYPE GYNOID TYPE Weight that is believed to be maximally healthy for a person and based chiefly
on height but modified by certain factors.
• Apple shaped • Pear shaped
Two methods:
• Body's extra fat gets distributed • Body's extra fat gets accumulated in
1.Tannhauser’s Method
over the abdominal region of the the lower body parts like thighs,
2.Fernando’s Method
body because of which the person's hips of which the person's body's
body's shape seems to be apple shape seems to be pear shaped
TANHHAUSER’S METHOD
shaped • Gynoid fat is a lower risk factor for
• Related to high cardiovascular cardiovascular disease than android
FORMULA
disease and mortality rate fat
(height in cm-100) - (height in cm-100) (10%) = weight in kg
GIVEN:
5feet 8inches to cm= 172.72cm
IBW = (172.72-100)-(172.72-100)(.10)
= 72.72 - 7.272
= 65.45 kg
FERNANDO’S METHOD
FEMALE: 100 lb for the rst 5ft + 5 lb for each additional inch
MALE: 101 lb fo the rst 5ft + 6lb for each additional inch
GIVEN
The patient is 250 lbs, converted to kg (divide it by 2.2) = 113.64 kg
IBW = 106 lbs + 48 lbs (5’8)
= 154 lbs/ 69.8 or 70 kg
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Case:
(10%)(65.45)(8hrs) = 52.36 kcal
cBMR= 1570.8 kcal/day - 52.36 kcal
cBMR= 1518.44 kcal/day
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syndrome and may respond to
treatments originally developed for
other insulin-resistant statesasing
the risk of heart disease
• 5 to 10% • 90 to 95%
• autosomal dominant inheritance • unknown cause
• signs first appear between 30s and • genetic and environmental risk
mid-60s (very rarely in the late 20s) factors
• 1% (age 60-65 and 50% (age over
Amyloid precursor protein 85)
(APP) gene - chromosome 21
(+ Down Syndrome) ApoE ε4
Presenilin-1 (PSEN1) - - chromosome 19
chromosome 14 - proteolytic - less effective allele in the break
subunit of γ-secretase
Presenilin-2 (PSEN2) -
chromosome 1 proteolytic
down β-amyloid
- ApoE ε4 x1 = increased risk
- ApoE ε4 x2 = most-at-risk
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subunit of γ-secretase
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ALZHEIMER’S DISEASE AND ASSOCIATION WITH:
BIOCHEMICAL CHANGES IN ALZHEIMER’S DISEASE
• increase the risk of AD by enhancing
• Plaques - these clumps of protein called beta-amyloid may damage the formation and/or deposition of
and destroy brain cells in several ways, including interfering with cell- amyloid beta, or that it may affect
to-cell communication non amyloid factors such as
• Tangles - threads of tau protein twist into abnormal tangles inside cerebrovascular risk, local
LIPOPROTEIN AND CHOLESTEROL
brain cells, leading to failure of the transport system. This failure is inflammation, or tau metabolism
strongly implicated in the decline and death of brain cells • Apo E bound to HDL inhibits the
• Improper APP processing - The proteases responsible for cleaving APP aggregation of amyloid beta
begin to malfunction • Free Apo E promotes the
• Disruption of Signaling - amyloid beta changes the signal transduction aggregation of amyloid beta
events within the cell to change cell behavior and contribute to the
development of Alzheimer’s; GSK-3 (Glycogen Synthase Kinase 3) begins to Astrocytes - increased in number and
take on other functions within the cell that contribute to the progression of become activated to produces
Alzheimer’s INFLAMMATION & IMMUNE prostaglandins/arachidonic acid to
• Breakdown of Cellular Structure - changes within the signal transduction of RESPONSE mediate inflammation
GSK-3 lead to a breakdown of the structure of the cell, and ultimately lead to Microglia - activated microglial cells
cell death produces damage free radicals
• Continuing the Cycle - After the formation of NFTs within a cell, and the
proceeding cell death, any amyloid beta that accumulated within that • Zinc, Copper, and Iron – associated
diseased cell is released into the brain, where it can affect neighboring cells with aggregation of Aß
and lead to more cell death • Sequestration of Copper –
generation of ROS, mediates Aß
toxicity
• Zinc – inhibits toxicity
METAL TOXICITY & FREE RADICALS
If tau becomes inactive, cytoskeleton is weakened, and the fibers can twist and • Cu2+ and Fe3+ converted to Cu+
tangle with each other, damaging the cell and forming structure called and Fe2+ (generate free radicals)
neurofibrillary tangles (NFT). The development of NFTs causes brain cell death • Free radical molecules - injure
neurons (Oxidative damage)
IMBALANCES OF HORMONES / NEUROTRANSMITTERS INVOLVED IN AD • Elevated homocysteine – increased
risk of AD
• Growth hormone inhibiting
• Smoking - risk factor for AD
hormone
• Causes vascular and
• Decreased levels in brains of CIGARETTE / TOBACCO SMOKING
neurodegenerative pathways to be
patients with AD
SOMATOSTATIN activated
• Increased growth hormones
• Decreased TSH
• Increased insulin. Decreased fasting TREATMENT AND PREVENTION OF ALZHEIMER’S DISEASE
blood glucose
• reduce acetylcholine breakdown
• Increases cerebral blood flow, ACETYLCHOLINESTERASE
Donepezil, Rivastigmine,
prevents neuronal atrophy and INHIBITORS
Galantamine
reverses nerve damage, particularly
in the area of the forebrain • Inhibit overstimulation of glutamate
damaged by Alzheimer’s disease NON-COMPETITIVE NMDA Memantin - binds to NMDA
• Has a protective effect in the INHIBITORS receptor channels and produces
ESTROGEN
development of AD a noncompetitive blockage
• Introduction of exogenous
estrogen may prevent or delay the • Addresses low mood & irritability
onset of AD ANTIDEPRESSANRS Citalopram, Fluoxetine,
Decreased level in menopausal Paroxetine, Setraline, Trazodone
women
• Addresses hallucinations, delusions,
• Catecholamine agression, agitation, & hostility
• Provides an endogenous anti- Aripiprazole, Clozapine,
ANTIPSYCHOTICS
inflammatory agent around glial Haloperidos, Olanzapine,
NOREPINEPHRINE
cells and blood vessels Quetiapine, Resperidone,
• Decreased with patients with AD Ziprasidone
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reduction in receptor sites of the
cells that receive serotonin
ROLE OF ANTIOXIDANTS DELETERIOUS EFFECTS OF FREE RADICALS
WHAT ARE FREE RADICALS? HOW ARE THEY FORMED AND WHATA RE • Chain of reactions of oxidative
THEIR DELETERIOUS EFFECTS TO THE BODY? degradation of lipids.
• It is the process in which free
LIPID PEROXIDATION
FREE RADICALS radicals "steal" electrons from the
• Molecular species capable of independent existence that contains an lipids in cell membranes
unpaired electron • Results in cell damage
• in an atomic orbital.
• Short life-span • Can be classified as Endogenous or
• Unstable and highly reactive Exogenous
• OXIDATIVE STRESS - tissue damage caused by oxygen radicals OXIDATIVE DNA DAMAGE • Provides direct routes to mutations
• OXYGEN RADICALS (ROS)- The most damaging radicals in biological • Pose a serious threat for genetic
systems are oxygen radicals integrity
○ Superoxide,Peroxide, Hydroxyl Radical and Hydroxyl ion
• Associated with cancer, atherosclerosis, Alzheimer's disease, Parkinson's • Reactive Oxygen Species
disease ENDOGENOUS • Replication errors
• Poor Repair System
FREE RADICALS FORMATION
• Ionizing Radiation (Ultraviolet
PHYSIOLOGIC PATHOLOGIC radiation, X-rays)
• Chemicals (Iron, Copper)
• Oxidative Phosphorylation • Inflammation EXOGENOUS
• Smoking
• Normal: Oxygen has 4 electrons to ○ Nadph oxidase • Pollution
be converted to water ○ Nitric oxide synthase • Diet (fatty and processed foods)
• Oxygen Free Radicals: Unpaired • Respiratory burst
electron ○ Superoxide dismutase
HOW ANTIOXIDANTS REDUCE FREE RADICALS
FREE RADICAL CHAIN REATION
• Tocopherol (Vitamin E)
• carotenes (Vitamin A)
• Ascorbic Acid (Vitamin C)
** Bioflavonoids
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FLAVONOIDS
FOOD SOURCE
• Fruits - blueberries, apples, oranges
• Vegetables - broccoli, cabbage, cauliflower
• Green tea
• Wine
• Dark chocolates
• Activation of T-lymphocytes,
polymorphonuclear leukocytes as
well as for cytokine production
• Inhibits infections by the influenza
IMMUNITY & INFECTION virus
• Neutralizes FREE RADICALS and
PEROXIDES
• ↓Reduced Glutathione = ↑
Oxidative Stress
• Anti-atherogenic property
• Protects against lipid peroxidation
Lipid peroxidase attacks the lipids
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CARDIOVASCULAR DISEASE
in blood vessel cell membranes,
causing cholesterol deposits in the
vessel wall
ANTIOXIDANT VITAMINS A, C, E
A. FOOD SOURCE
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VITAMIN E DEFICIENCY
Hemorrhagic Disease
• Due to vitamin e deficiency, there is no inhibition of free radicals in RBC
membrane, oxidation will occur, leading to decrease membrane structure
integrity which will increase the fragility of RBC leading to erythrocyte
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hemolysis that can progress to anemia.
• Muscular Dystrophy
• Hepatic Necrosis
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XENOBIOTICS PHASE 2
• Comes from the Greek xenos (foreign) and biotics (of or pertaining to life) The formed slightly polar metabolite from Phase 1 [X-OH] will now undergo
• Foreign chemical matters Phase 2 for Conjugation.
• Not commonly naturally produced by or expected to be present within. In this phase conjugation of the metabolite produce from phase 1 with
glucuronic acid, sulfate, acetate, glutathione, or amino acids produces more
• Produce biological effects: polar compounds that are more water soluble and can therefore readily be
Pharmacological responses excreted in urine or bile.
Toxicity
Immunological responses GLUCURONIDATION
Cancers Cofactor: UDP-glucuronic acid
Enzyme: glucuronosyltransferases
Examples: Pharmaceuticals, Pesticides, Cosmetics, Food Additives / Flavorings, • The glucuronide may be attached to oxygen, nitrogen, or sulfur groups of the
Industrial Chemicals, and Environmental Pollutants substrates
• Glucuronidation is probably the most frequent conjugation reaction
EXOGENOUS UDP- glucuronic Acid + X → Glucuronides
• Not normally ingested or utilized by an organism, but they access the body
SULFATION
through dietary food or in the form of therapeutic drugs
Cofactor: 3’- phosphoadenosine 5’-phosphosulfate (PAPS)
Examples: drugs, food additives, pollutants, insecticide, chemical carcinogens
Enzyme: sulfotransferases
In general, these enzymes catalyze the transfer of sulfate from the sulfate donor
ENDOGENOUS
3’- phospoadenosine 5’-phosphosulfate (PAPS)
• Have effects similar to exogenous xenobiotics.
PAPS + X → X-
• Synthesized in the body
• Produced as metabolites
CONJUGATION WITH GLUTATHIONE
Examples: Bilirubin, Bile Acids, Steroids
Cofactor: tripeptide glutathione (γ-glutamylcysteinylglycine)
SIGNIFICANCE TO MAN Enzyme: Glutathione-S-Transferase
Products excreted in urine and bile.
• Knowledge of the metabolism of Xenobiotics is essential for an X-OH + GSH → X-S-G (Glutathione-S-Conjugate)
understanding of Pharmacology, Toxicology, and the Management of
disease ACEYTLATION
• Many of the Xenobiotics in plant foods have potentially bene cial effects Cofactor: Acetyl Coenzyme A
and knowledge of their metabolism will permit extrapolation from in vitro Enzyme: acetyltransferases
measurement of antioxidant activity to in vivo protective action X-OH + Acetyl-CoA → Acetyl-X + CoA-SH
• Understanding the mechanisms involved in Xenobiotic metabolism will
METHYLATION
permit the development of transgenic microorganisms and plants
Cofactor: S-adenosylmethionine (SAM)
containing genes
Enzyme: methyltransferases
X-OH + SAM → X-CH3
METABOLISM& DETOXIFICATION OF XENOBIOTICS
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• The major enzymes involved in drug metabolism (xenobiotic) • Characterize by a pervasive and persistent low mood that is accompanied
Present in highest amount in liver and small intestine especially in the by low self-esteem and loss of interest and pleasure in normally enjoyable
membrane of SER activities
• A hemoprotein – containing a heme cofactor • Major depressive episode – for at least 2 weeks
• The most common reaction catalyzed by cytochromes P450 is a 4 symptoms:
monooxygenases reaction Changes in appetite and weight
Catalyze insertion of one atom of molecular oxygen Changes in sleep and activity
• Substrates are numerous and diverse compounds Lack of energy
Endogenous – cholesterol, steroid hormones, and fatty acids Recurring thoughts of death or suicide
Exogenous – drugs, food additives, and environmental contaminants (ex. • Impaired work ability
cigarette smoke) • Poor social functioning Pessimism
• Often linked to suicide attempts
Biologic Functions of Cytochrome P450
A. Production of steroid hormones, vitamins A and D, lipid-like eicosanoid HORMONE VS NEUROTRANSMITTER
molecules involved in signaling
B. Metabolism of fatty acids and eicosanoids (e.g. P450 CYP51, essential in CHARACTERISTICS HORMONES NEUROTRANSMITTER
eukaryotic sterol biosynthesis.)
C. Detoxification Hormones are Neurotransmitters are
D. Many substrates are lipid-soluble; hydroxylation increases solubility regulatory chemical
substances which are substances which are
Cytochrome P450 effects in medicine. It is involved in: produced in released at
A. Inactivation or activation of therapeutic agents an organism & the end of a nerve cell
B. Conversion of chemicals to highly reactive molecules, which may DEFINITION transported in by the arrival of nerve
produce unwanted cellular damage, cell death, or mutations; tissue fluids like blood impulse,
C. Production of steroid hormones; and or sap, stimulating transmitting the impulse
D. Metabolism of fatty acids and their derivatives. specific cells or tissues into another neuron,
into action. muscle or some
Drug interaction of Cytochrome P450: other structure
A. Major role in drug detoxification type CYP3A4 estimated to act on ~
ORGAN SYSTEM
50% of known drugs (e.g. the antibiotic erythromycin) Endocrine System Nervous Sten
INVOVLED
B. Some reactions are harmful
C. CYP3A4 catalysis of acetaminophen (Tylenol) MODE OF
D. Cytochrome P450 – Pigment with an absorbance at 450 nm Through blood Across the synaptic cleft
TRANSMISSION
o This is the characteristic absorbance of CYP450 when bound to carbon
monoxide (CO) TRANSMISSION
Slow Fast
SPEED
1. Age, sex & other factors SIGNALS Endocrine Signaling Paracrine Signaling
2. Species, genetics
3. Intake of various xenobiotics can cause enzyme induction Growth and
4. Metabolites of certain xenobiotics can inhibit/stimulate the activities of development,
xenobiotic-metabolizing enzymes maintenance of sexual
5. Various diseases (e.g. Cirrhosis) can affect drug-metabolizing enzyme development, food Transmission of nerve
FUNCTION
activities metabolism, signals
body temperature,
mood
MAJOR EFFECTS OF XENOBIOTICS
regulation
1. Cell Injury - Covalent binding of xenobiotics to cell macromolecule →
Steroids, Polypeptides & Proteins, Amino acids,
macromolecules targets DNA, RNA and protein → Cell injury → Cell TYPES
Amines Gases
death
2. Hapten - If the xenobiotic binds to protein altering its antigenicity, the
Only stimulate the
xenobiotic is said to act as Hapten Capable of Regulating
UNIQUE CAPABILITY postsynaptic
3. Mutation - Important in chemical carcinogenesis target organs or tissues
neurons
Monooxygenases or xenobiotic → metabolize enzyme present in
endoplasmic reticulum→ determine whether such compound become LOCATION Glands Synaptic Vesicle
“carcinogenic” or “detoxified”
Serotonin, Dopamine,
Oxytocin, Testosterone,
Norepinephrine,
EXAMPLE Cortisol,
Epinephrine,
Estrogen
Glutamate
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NEUROTRANSMITTERS THAT PLAYS A ROLE IN EMOTION
An interconnected pathway of dopamine, epinephrine, • No single genetic variation has been identi ed
norepinephrine and serotonin • Genetic variants have only small effects on overall disease risk
Involves the conversion of amino acid precursors: Tyrosine & Tryptophan • Multiple genetic factors in conjunction with environmental factors are likely
This pathway involves the synthesis, reuptake and degradation of for development of depression
monoamines. • Twin studies suggest a heritability of 40% to 50% and family studies indicate
a 2-fold to 3-fold increase in lifetime risk of developing MDD among first
MonoamineTheory / Hypothesis degree relatives
May serve as a basis of Depression • SLC64A and 5-HTTLPR – serotonin gene transporters
Depletion of the available 5-HT, NE and/or DA is used as a model to test the • Polymorphism in Brain derived neurotrophic factor (BDNF)
involvement of monoaminergic systems • THP2 gene-associated with tryptophan hydroxylase
Over-expressed MAO-A isoform in the brain degrades serotonin and
norepinephrine
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• The virus can spread from an infected person’s mouth or nose in small liquid
MANAGEMENT OF DEPRESSION particles when they cough, sneeze, speak, sing or breathe.
• These particles range from larger respiratory droplets to smaller aerosols.
PHARMACOLOGIC TREATMENTS
• INITIAL SYMPTOMS: Fever, chills, cough, muscle ache, fatigue, loss of taste/
• The most commonly smell
prescribed Fluoxetine
antidepressants Escitalopram
• Treat depression by Paroxetine DEFINITION OF TERMS
increasing levels of Sertraline
SELECTIVE serotonin in the brain • Virion - a complete virus particle that consists of an RNA or DNA core with a
SEROTONIN • SSRIs block the protein coat sometimes with external envelopes and that is the extracellular
REUPTAKE INHIBITORS reuptake of serotonin infectious form of a virus
(SSRIs) into the presynaptic
nerve terminal via the • Virus - are the smallest infectious particles which cannot be seen by an
serotonin uptake site ordinary microscope. They are an obligate intracellular parasites that requires
• Selective because it
host cells for replication. They lack the capacity to thrive and reproduce
mainly affects
outside of a host body
serotonin
SELECTIVE • May be an effective Venlafaxine • Cytokines - are polypeptide products activated cells that the control a variety
NOREPINEPHRINE form of treatment for Desvenlafaxine of cellular response and thereby regulate the immune response; this are
REUPTAKE INHIBITORS people who’ve had Duloxetine synthesize and secreted by the cells assoc with innate and adaptive immunity
(SNRIs) unsuccessful treatment in response to microbial and other antigen exposure.
with SSRI
• Moderately selective
• Antigens - is a substance that stimulates antibody formation and has the
blockade of NET and
ability to bind to an antibody or a T lymphocyte Ag receptor but may not be
SERT
• Inhibit the reuptake of able to evoke an immune response initiall
both serotonin and
norepinephrine • Antibody - is a protein produced by the body's immune system when it
detects harmful substances, called antigens
TRICYCLIC • TCAs block Imitrapine
ANTIDEPRESSANTS norepinephrine and Amitrptyline
• Complements - The complement system plays a critical role in inflammation
serotonin reuptake Desipramine
and defence against some bacterial infections. Complement may also be
into the neuron Nortriptyline
• Blocks action of activated during reactions against incompatible blood transfusions, and
acetylcholine and during the damaging immune responses that accompany autoimmune
histamine disease
NON-PHARMACOLOGIC TREATMENTS
• Non-invasive
REPETITIVE
• Magnetic impulses are delivered to the brain to
TRANSCRANIAL
stimulate the nerve cells related to mood and
MAGNETIC
depression
STIMULATION
• Unresponsive patients to therapy and medication
• Shock Therapy
ELECTROCONVULSIVE
• Moderately invasive, results in a seizure while
THERAPY
under anesthesia
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WHAT IS A VACCINES?
SARSCOV-2 VIRAL STRURTURE
• A product that stimulates a person’s immune system to produce
immunity to a speci c disease, protecting the person from that disease.
• Usually administered through needle injections, but can also be
administered by mouth.
TYPES OF IMMUNITY
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SUMMARY
REFERENCES:
• BESHYWAP
• E2 2024 CONFERENCES
• WHO
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