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  • Fuzzy Matching

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    api-569038091
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    This document compares the results of fuzzy string matching using the agrep tool to exact string matching using egrep on DNA reads. It finds nearly perfect linear correlations between the percentage of reads matched by each tool, with R-squared values above 0.9 for all tested levels of fuzziness. This suggests fuzzy matching can reliably correspond to exact matching.

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    This document compares the results of fuzzy string matching using the agrep tool to exact string matching using egrep on DNA reads. It finds nearly perfect linear correlations between the percentage of reads matched by each tool, with R-squared values above 0.9 for all tested levels of fuzziness. This suggests fuzzy matching can reliably correspond to exact matching.

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    © All Rights Reserved
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    29 views1 page

    Fuzzy Matching

    Uploaded by

    api-569038091
    This document compares the results of fuzzy string matching using the agrep tool to exact string matching using egrep on DNA reads. It finds nearly perfect linear correlations between the percentage of reads matched by each tool, with R-squared values above 0.9 for all tested levels of fuzziness. This suggests fuzzy matching can reliably correspond to exact matching.

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    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
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    of 1

    Does Fuzzy Matching Correspond with Exact Matching? YES!

    2.5
    agrep % of totals

    1.5

    R² = 0.9707
    R² = 0.9354
    1
    R² = 0.927
    R² = 0.8728

    0.5

    0
    0 0.5 1 1.5 2 2.5 3 3.5

    egrep % of total reads


    agrep -1 agrep -2 agrep -3 agrep -4 Linear (agrep -1) Linear (agrep -2) Linear (agrep -3) Linear (agrep -4)

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