Professional Documents
Culture Documents
vol 3 | 2017
About Zygote Quarterly
Editors
Marjan Eggermont Norbert Hoeller
Tom McKeag
Contributing Editors
Adelheid Fischer Raul de Villafranca
Kristen Hoeller Manuel Quirós
Offices
Calgary Mexico City
San Francisco Phoenix
Toronto Madrid
Contact
info@zqjournal.org
Cover art
Cover: Close Fishing (detail) - Pesca de Cercanía Scales - Escama de Rio 2 | Photography Central
| Photography Central Restaurante, pp. 2-3: River Restaurante, pp. 104-105: Thick Stems - Tallos
Engrosados | Photography Central Restaurante.
Design
Marjan Eggermont Colin McDonald
ISSN
1927-8314
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Coastal Harvest - Cosecha en Costa | Photography Central Restaurante
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Article: Going to Extremes
Tom McKeag
8
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Article
Going to Extremes
Tom McKeag
Going to Extremes
Part one of two parts: extraordinary organisms the mining that brought forth the wealth that
helped launch the great age of European mari-
time discovery.
Biomimics have several ways in which to study
The Iberian Pyrite Belt is one of the richest sulfide
living organisms for clues to solving their prob-
deposits in the world and strikes a 250 km east/
lems. They might look to compare functional
west swath across southwest Spain and parts
success across ecosystems, or they might study
of Portugal. Within it is an ore deposit rich in
the variations and range of success of single
iron, copper, zinc, gold, lead, arsenic and silver.
mechanisms. They might investigate conver-
The Rio Tinto has been mined since around 3,000
gence, where the same solutions have evolved
BCE, and scholars believe that this was the birth-
in genetically distinct species. They might study
place of the Copper and Bronze Ages. Iberians
all-round survivors, or, alternately, specialty
and Tartessans from the region first worked the
champions, in say, speed or strength or endur-
pits, and then Phoenicians and Romans, lured
ance. One path to insight is to study those or-
across the Mediterranean by the rumor of riches.
ganisms that can really take it; live and repro-
Some of the first Roman coins were minted from
duce under the most demanding conditions.
metals found here. Later, Visigoths, then Moors,
These are the extremophiles. They exist all over
Spanish and English all worked the mines up un-
planet Earth, have been here a lot longer than
til circa 1998. As a result, the river holds the du-
we have, and have much to teach us about how
bious distinction of being the longest continu-
to thrive under adversity.
ally polluted watercourse in the world and one
of the worst.
Acid This is also the world’s most acidic river, made
from water with a pH range from 1.7-2.5. This
The Rio Tinto River flows in deep red hues from
is more acid than lemon juice, which contains
the Sierra Morena mountain range 95 km south-
5-6% citric acid and typically has a pH of be-
southwest to the Bay of Cadiz on the Atlantic.
tween 2 and 3. You would not want to mix the
It is from an embayment of this very river that
waters of Rio Tinto for your lemonade, however,
Columbus set sail in 1492, to discover a small tip
unless you desired a toxic cocktail of heavy met-
of another world on the other side of the ocean.
als and a draught comparable to sulfuric acid
His voyage was as tied to the red color of the
(around a pH of 2.0).
river as its geographical location. The river is red
because of iron, and that iron is associated with Despite this toxicity, life seems to not only ex-
ist here, but to thrive. Over 1300 forms of life
have been collected and include bacteria, dia-
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Rio Tinto | Photo: BigMaxPower(BMP), 2009 | Flickr cc
Page 12 of 106
toms, yeast, fungi, algae and protists. The fact (between 2.5 billion to 600 million years ago)
that a wide diversity of the more structurally where a mix of aerobic and anaerobic organisms
complex Eukaryotes thrive here has fascinated co-existed and influenced their physiochemical
scientists and upended the common belief that surroundings. It might also be our closest model
extreme environments only support Eubacteria for the environment on Mars.
and Archaea.
The Iberian Pyrite Belt was formed in an ancient
This trophic system is based fundamentally on hydrothermal system associated with basaltic
the bacteria, and there is evidence that they are volcanism. The presence of volcanoes and sur-
not only thriving in the river’s extreme environ- face ice on Mars suggests a similar regime. Mars
ment, but are creating it and causing its red color. also has a lot of iron and sulfite, the components
The chemical structures currently being formed for sulfides like those at Rio Tinto, and basaltic
in the river are similar to the structures in bio- volcanism appears to have been widespread on
formations found in ancient terraces of the river the Red Planet.
that predate mining. In other words, iron-loving
NASA scientists have drilled below the surface
microorganisms here have been creating acidic
of Rio Tinto for core samples in order to assay
fluvial conditions by their metabolic activity for
organisms that do not get their energy from the
thousands of years.
sun, but from chemicals like iron and sulfur, the
These are so-called chemolithotrophic organ- chemoautotrophs. This work has been conduct-
isms; ones that feed on the chemicals from rocks. ed through the Mars Analog Research and Tech-
Iron-oxidizing and sulfur-oxidizing bacteria like nology Experiment (MARTE), and has served as
Euglena mutabilis and Thiobacillus ferrooxidans both an exploration of life in the Rio Tinto area,
have been making the river red for thousands of and a testbed for sampling techniques and
years. The Phoenicians called it “the river of fire”. technologies for the exploration of Mars. If life
Bacteria with more discriminating palates re- is to be found there it will probably exist under-
stricted to iron, like Leptospirillum ferrooxidans, ground and might use some of the survival tech-
are voracious eaters and can skeletonize steel niques found in what the Moors called “the River
plate in a matter of a dozen years. Other bacte- of Sulfuric Acid”.
ria appear to dine on the natural troves of met-
al sulfides, creating the sulfuric acid that, when
mixed with the oxidized iron, cultures heavy Alkaline
metals in solution.
Over 3600 km west from where Columbus
This environment is so unique and unlike what made landfall in the Bahamas is a unique place
typically supports life on earth that scientists of equally harsh natural wonders in the land-
have used the area as a study zone for learning locked center of the continent he thought was
more about our terrestrial past and what may Asia. Yellowstone National Park in the states of
be our extraterrestrial future. The conditions Wyoming, Montana and Idaho, USA, has been
here might be comparable to the Proterozoic shaped by relatively recent seismic activity that
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zq20
vol 3 | 2017 Article Author:
Going to Extremes Tom McKeag
has created highly alkaline hot springs. Many Salt lakes typically exhibit other daunting chal-
species of thermophilic bacteria, producing lenges to life: extreme temperature swings, an-
bright yellows and oranges, as well as viruses oxic conditions, and wet/dry cycles. As in many
and diatoms exist where water temperatures extreme environments, the lake’s conditions
may routinely reach 30-85 degrees C and pH val- have favored a less diverse population domi-
ues hover typically between 6 and 9. nated by a few species; multiplied unchecked
by aquatic competition or predation. The fasci-
nating array of creatures in this ecological niche
Salt includes around 5 trillion brine shrimp, Artemia
monica, alkali flies, Ephydra hians, autotrophic
685 km southwest of Yellowstone is another al-
algae and bacteria that form extensive gelati-
kaline geographic feature; this one is also hyper-
nous mats.
saline. Mono Lake, in the state of California, lies
to the east of the Sierra Nevada range. It is one of A. monica is endemic to this lake, but the genus
the most alkaline and saline lakes in the United is found worldwide wherever terrestrial water
States and it is also quite old; around 760,000 bodies have high salt, as much as 250 grams per
years. The unusual water chemistry contains liter or 250%. While 30-35% is optimal physiolog-
carbonates, chlorides and sulfates, and aver- ically for the shrimp, 60-80% is the level where
age salinity is measured at 81 grams per liter, or they escape aquatic predators unequipped to
about three times saltier than typical seawater. survive in the salt. While neither shrimp nor the
The salt is mainly sodium chloride, but also com- flies (who spend most of their life in water as
prises sodium sulfate, and carbonate. The lake larvae) have to worry about being gulped down
is 80 times more alkaline than seawater, with a by fish, they do have to mind the skies above.
pH of 10 and contains unusually high concentra- Mono Lake is a haven for thousands of migratory
tions of borate and potassium.
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Tufa Towers Mono Lake | Photo: m01229, 2016 | Flickr cc
Mono Lake
Photo: John Getchel Photography, 2013 | Flickr cc
Page 18 of 106
birds drawn to the abundance and to the safety
of the lake’s two islands. As many as 800,000
have been recorded in a single day.
Within their one-year life cycle, brine shrimp
have evolved two critical advantages. When ox-
ygen is low or salt high, days short or tempera-
tures wildly variable, Artemia secrete a rigid non-
cellular shell to protect themselves. The female
crustacean will also lay her eggs or cysts with a
protective chorion coating that allows them to
remain in cryptobiosis for two years, withstand-
ing extreme cold (-190 degrees C) and heat (105
degrees C) for short periods of time as well as no
oxygen. The chorion has two distinct layers, an
outer compact cortical layer composed of chitin,
lipoprotein, hematin, and some metal elements
and an inner alveolar layer. All of this is overlain
by a supra cortical layer, a three-layer composite
of fibers sandwiched between cuticulin mem-
branes. This cyst shell plays an important role in
resistance to UV irradiation, large temperature
differences, osmotic pressure, dryness, and or-
ganic solution stresses. The combination of the
protective shell and the ability to lapse into di-
apause or physiological dormancy has enabled
the shrimp’s evolutionary survival for some 400
million years.
Cold
The Southern Ocean surrounding Antarctica is at
once the most challenging marine environment
on Earth and the richest. The uninterrupted wa-
ters south of 65 degrees south latitude move in
the Antarctic Circumpolar Current, the strong-
est current system in the world, moving great
masses of water one hundred times the volume
of all the world’s rivers, ever eastward in a com-
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Copepod | Photo: Labut, 2005 | Flickr cc
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Zygote Quarterly: zq20 | Volume 3, 2017 | ISSN 1927-8314 | Pg 23 of 106
A globular dandelion siphonophore | Photo: NOAA Photo Library, 2015 | Flickr cc
Page 24 of 106
and shrimp feed on the microbes and in turn In some places, glacier melt during summer pro-
are eaten by fish and other predators. There is vides the surficial soil moisture that makes the
also mutualism occurring here, as creatures like desert organisms spring to life: rotifers, tardi-
red-tipped tubeworms, white crabs, dandelion grades, famous for their cryptobiosis, and nem-
siphonophores and shrimp host the microbes on atodes. The well-known Blood Falls of the Taylor
or in their bodies in exchange for the nutrients Glacier, red from iron oxides, is an example. Also
produced by them. in these dry gravelly soils are, Acidobacteria and
Actinobacteria, including Deinococcus and Ru-
The discovery of these lush living communi-
brobacter, desiccation tolerant super-survivors.
ties in these other-worldly conditions has com-
In much of these soils there do not appear to be
pletely changed the theory of how life may have
the autotrophs that typically form the base of
formed on earth. These Archaea are thought to
an ecosystem, those organisms that are the first
be the oldest forms of life on Earth. Life as we
to start the energy transfer by creating it them-
know it may have started in these extreme and
selves from either the sun (photoautotrophs) or
violent conditions: in complete darkness, under
chemicals (chemoautotrophs).
tremendous pressure, in a superheated bath of
toxic chemicals. Most of the life of this place lives not in soil but
in rock: endoliths and chasmoliths, dwellers
within and between stone. A few millimeters
Dryness below the rock surface they find higher, more
stable temperatures, some protection from the
The McMurdo Dry Valleys in Antarctica are just
intense UV radiation, and more retained mois-
that. Located in southern Victoria Land, west
ture. They appear to be distributed in two dis-
of McMurdo Sound, they comprise about 4800
tinct layers, a top 2 mm layer dominated by a
square kilometers of icesheet-free desert, the
lichen comprising the fungus Texosporium sanc-
driest on the planet. Average temperatures here
ti-jacobi, and the alga Trebouxia jamesii. Below
are -20 degrees C, and annual precipitation in
the 2 mm level the cyanobacteria Chroococcidi-
the Wright Valley, for instance, averages less
opsis dominates.
than 100 mm (3.9 inches) water equivalent per
year. The valleys are sandblasted by strong, ka- Chroococcidiopsis is as resistant to radiation
tabatic winds averaging 50 kilometers per hour. damage as Deinococcus radiodurans. The D. ra-
Cold dense air pulled down from East Antarctic diodurans bacteria are found everywhere, but
Ice Sheet heats up as it descends and dries eve- their ability to survive is anything but common.
rything in its path, sometimes reaching speeds They can withstand radiation 1,000 of times
up to 320 kilometers per hour. Because of this more deadly than humans can resist (3 million
lack of water, the ability to dry out, suspend ac- rads). Their secret for success lies in their abil-
tivity, and resume life when moisture returns is ity to repair DNA damaged by radiation, toxicity
a distinct advantage. or accident. They can repair up to 500 breaks in
their DNA nucleotide and replace the damaged
chromosomes.
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Zygote Quarterly: zq20 | Volume 3, 2017 | ISSN 1927-8314 | Pg 27 of 106
Blood Falls seeps from the end of the Taylor Glacier into Lake Bonney. The tent at left provides a sense of scale for just
how big the phenomenon is. Scientists believe a buried saltwater reservoir is partly responsible for the discoloration,
which is a form of reduced iron. | Photo: National Science Foundation/Peter Rejcek, 2006 | Flickr cc
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vol 3 | 2017 Article Author:
Going to Extremes Tom McKeag
Southern Ocean
World map
Image: McZusatz/DEMIS Mapserver, 2013 | Wikimedia Commons
Page 30 of 106
Those living in the cracks of rocks are of a similar
mix of various lichens and cyanobacteria. There
are also cyanobacteria that live in translucent
stone, the hypoliths, and squeeze all they can
out of the little light that comes their way, less
than 0.1% of incident light.
As at the Rio Tinto, scientists have been surprised
at the diversity of life and the wide variety of
mechanisms for survival. The three lithic com-
munities studied include representatives from
19 phyla and 2 domains. Equally surprising is that
those two domains do not include the Archaea,
the typically assumed stars of extreme environ-
ments.
All around our globe, life persists despite condi-
tions that seem insurmountable. The discover-
ies of new biological phenomena in unexpected
places are providing clues to solving problems in
many different fields. They are also revealing a
wondrous richness in the biota that inhabit our
planet, and testing long held assumptions about
where and how life is possible. ⊗
Page 32 of 106
Interview
Vytas SunSpiral
Vytas SunSpiral is an entrepreneurial researcher mov- of more than 50 journal and conference articles and
ing fluidly between leading startups and building re- was a contributing author of the 2013 Roadmap for
search labs to explore cutting edge robotic and AI US Robotics. Over the last 20 years he has also been
technologies. He is a Fellow of the NASA Innovative the Founder, CTO, and Advisor to multiple startups,
Advanced Concepts (NIAC) program, and founded the including Mobot, which sold the world’s first com-
Dynamic Tensegrity Robotics Lab (DTRL) within the mercially available autonomous tour guide robots.
Intelligent Robotics Group at NASA Ames Research Vytas holds a Masters in Computer Science and a BA in
Center. His research spans a multi-disciplinary fusion Symbolic Systems from Stanford University. Vytas re-
of robotics, physiology, AI, mechatronics, and neuro- cently left NASA and is now the Director of Advanced
science, with the goal of understanding human intel- Technologies at Zymergen Inc, where robotics and AI
ligence via the foundational role that motion plays in are enabling new approaches to engineering biology
our evolution. This quest led to a fundamental new from the DNA up. This fusion of biology and technol-
approach to robotics that has the potential to rein- ogy is increasing the yields for industrial fermenta-
vent how we explore the solar system. He is an author tion processes, and is enabling the discovery of novel
materials which cannot be synthesized with existing
engineering methods.
Page 34 of 106
world. I became interested in robotics as an ex- tion in one part of the body that influenced the
ample of ‘embodied machine intelligence’, par- functioning of other parts. I began to appreci-
ticularly robots that built a picture of their world ate the body as a complex, tensile network that
through exploring it. worked holistically to redistribute forces. This
integrative approach was dramatically different
from the simplified engineering models of ro-
What else influenced your thinking about robotics? bots that dealt with single axial rotation.
I have always been interested in ‘being in my The eureka moment came while attending a
body’, through yoga, dancing, and martial arts. 2007 Bodyworlds exhibit (http://www.body-
All that fun also resulted in some injuries which worlds.com) displaying human bodies pre-
led me to holistic therapists and how they un- served through Plastination. I realized that
derstood the body. For example, rather than rec- connective tissue was acting as a ‘whole body’
ommending rest, they applied active manipula- harness which could only be understood us-
First SUPERball prototype in front of the NASA Ames Wind Tunnel. Many fundamental design and control insights were
gained with this version.
Photo courtesy of Vytas SunSpiral
ing a distributed approach. In contrast, robot- ranges of motion. Soft robotics is an interest-
ics typically involved numerous sensors that fed ing area of research that is beginning to address
information to a central processing unit that in these issues.
turn controlled discrete actuators. Such an ap-
proach breaks down as the degrees of freedom
increased beyond seven due to the computation- How have you overcome these challenges?
al complexity. The human body with hundreds
The first step is realizing that we are apply-
of muscles is based on a different model involv-
ing preconceptions and filters to everything
ing local sensing and control combined with the
we study. The next step is building something
tensile network of connective tissue that links
based on our current knowledge, comparing the
the distributed components. As shown by ex-
results to how natural systems work, then up-
tensive research into decerebrated animals,
dating the filters and associated underlying as-
complex motion is possible without any form
sumptions. Being inspired by biology and de-
of central control.
veloping an engineering solution is only half
the journey – we need to honestly ask how our
technical system compares to the natural sys-
What are the major challenges facing bio-
tem, and use that knowledge to increase our
inspired design?
understanding of both systems. The different
We interpret the world through the filters of perspectives of therapists and engineers and the
what we already understand, using existing obvious differences in how the human body per-
knowledge to make sense of the river of infor- forms compared to our robots drove me to ex-
mation that we live in. The challenge is that we plore this gap and why it arises.
often use engineering paradigms when we try
My core interest is understanding the human ex-
to understand biology, even though these para-
perience, using robotics as a mirror to increase
digms do not accurately reflect the underlying
my understanding of how the body and mind
biological principles. The reductionist approach
are integrated, and how the body works as a ten-
involving mechanistic deconstruction can allow
sile system with distributed and decentralized
us to apply mathematical and analytical meth-
control. I use the analogy of having biology and
ods that we are familiar with in new situations,
engineering ‘fun-house’ mirrors facing each oth-
but may also prevent us from fully understand-
er, creating an infinite creative space.
ing the complexity of biological systems, and
even increasingly complex technical systems. I avoid ‘toy problems’ that over-simplify com-
plexity. Life must be reliable and pragmatic,
The tools and devices available in engineering
and robots also need to survive in the complex,
do not map perfectly to biology. Muscle groups
messy world. I have been fortunate to work on
are not comparable to mechanical actuators –
solving pragmatic problems for NASA although
they are aggregates of thousands of muscle fib-
at times the engineering challenges make it dif-
ers that act independently, delivering complex
ficult to ‘loop back’ to the biology.
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Multiphoton microscopy of mouse motor neurons | Photo: ZEISS Microscopy, 2012 | Flickr cc
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Confocal microscopyof mouse brain, cortex, detail | Photo: ZEISS Microscopy, 2013 | Flickr cc
Page 40 of 106
I often hear concerns that we lack the engineer- were brainstorming with a tensegrity toy that
ing capabilities required to implement solu- easily survived rough landings. Tensegrity prin-
tions inspired by biology. It is worth remember- ciples combined with my insights of the human
ing that we are seeing the result of incremental body led to robots with physical priorities that
evolution that often started with simple and im- had not been explored before.
perfect forms. Instead of waiting for the engi-
Our explorations led to the Super Ball Bot, com-
neering capabilities to be perfected, work with
posed of rods without rigid connections but in-
what you have and incorporate feedback loops
stead cables that collectively absorbed and dis-
to mimic evolution.
tributed loads. It can land safely on a planet
without complex landing systems like airbags,
then roll across varied terrain by modifying its
How has your work developed?
shape. The Super Ball displayed non-linear char-
After I graduated from Stanford, I helped launch acteristics and could not be modelled using tra-
my first start-up, Mobot Inc., where we made ditional methods. Rather than a central control
fully autonomous socially-interactive robots for system, we used adaptive machine learning and
museums, which required diving into physical Central Pattern Generators inspired by neurosci-
aspects including electrical and mechanical en- ence.
gineering. Like many start-ups without a solid
business plan, it eventually folded. After about
a year and a half of adventuring and traveling, What allows you to make your ideas real?
I joined NASA Ames Research Center in Moun-
I start by defining a vision and then determin-
tain View. As I got deeper into robotics, machine
ing what actions I can implement now that will
learning, and state tracking algorithms, I began
help move toward that vision. I do not wait for
to feel that I was getting far from my roots of
the perfect plan – even if it exists, it will rarely
understanding humans: the interrelationship of
survive contact with reality. I constantly look
our experience, how our bodies work, and intel-
for learning opportunities that provide useful
ligence. At the time, I was working on a four-me-
insights and capabilities.
ter-tall, six-legged walking robot called ATHLETE.
The size of the robot allowed large internal lever- I build and nurture an extensive network of col-
arms to magnify and accumulate forces at joints, laborators who are leaders in fields related to
which caused significant strain on its compo- what I am working on. I also rely on my local
nents as well as our models and algorithms, team who bring expertise and skills that I lack,
reinforcing my belief that biology had much to and often deliver results quite different from
teach us about reliable and robust mechanisms. what I expected.
Tensegrity principles have been used to design
deployable structures – my interest is the redis-
tribution of forces enabling direct engagement
with the environment. Adrian Agogino and I
What insights have you developed? Both biology and engineering have addressed
problems that the other discipline has not.
Math has limited our design space. For example,
Search for meaningful problems where biology
the math required to model flexible or compli-
can provide novel answers.
ant materials in design is really hard. Nature is
not limited by mathematical models – it can use We all tend to play it safe, focusing on building
physical properties of materials that are non-lin- expertise and staying within our comfort zone.
ear. Natural systems handle the resultant com- Taking risks can be stressful but also exciting
plexity and unpredictability through distributed when we create learning opportunities at the
and emergent control systems that are compli- intersection of biology and engineering.
ant, resilient, and adaptable.
Requirements are important but can inhibit cre-
ative/radical innovation. Search for key princi-
ples in biological systems, apply them to solve
How has robotics changed you?
real problems, compare the results to your vi-
This is a hard question to answer, since I’ve been sion, and constantly strive to close the gaps. ⊗
working with robots since I was in college, it is
hard to separate the natural process of learn-
ing and growing from the impact of being in
the field of robotics. Certainly, one important
impact has been helping me be technically well
rounded. While I started in AI, robotics encom-
passes all the branches of technology – includ-
Additional Readings
ing a wide range of algorithms (vision, localiza-
tion, mapping, optimization, machine learning, SunSpiral, V. (2015, February 24). NASA 360 video. Re-
etc.), mechanical design, electrical engineering, trieved April 5, 2017, from http://www.magicalrobot.
network management, user interfaces, and even org/BeingHuman/2015/02/nasa360
material science. Good solutions require an in-
Super Ball Bot – Structures for Planetary Landing and
tegration of these many fields and more, so that
Exploration (NASA Intelligent Systems), Retrieved
has kept me learning and broadening my knowl-
March 4, 2017, from https://ti.arc.nasa.gov/tech/asr/
edge base throughout life.
intelligent-robotics/tensegrity/superballbot/
Page 42 of 106
SunSpiral, V. (2014, June 27). Open Source Tensegrity Degrees of Freedom Traversing Irregular Terrain.
Simulator Released! Retrieved from http://www.mag- Soft Robotics, 2(4), 165–176. https://doi.org/10.1089/
icalrobot.org/BeingHuman/2014/06/open-source- soro.2015.0012 (includes 4 downloadable videos)
tensegrity-simulator-released
SunSpiral, V. (2014, July 22). Synaptic Motion. Re-
SunSpiral, V., Agogino, A., & Atkinson, D. (2015). Super trieved from http://www.magicalrobot.org/Being-
Ball Bot - Structures for Planetary Landing and Explo- Human/2014/07/synaptic-motion
ration (p. 115). NASA Ames Research Center Intelligent
SunSpiral, V. (2014, November 11). Synaptic Motion
Systems Division. Retrieved from http://www.sunspi-
Highlights. Retrieved from http://www.magical-
ral.org/vytas/cv/phase2report_small.pdf
robot.org/BeingHuman/2014/11/synaptic-motion-
Mirletz, B. T., Bhandal, P., Adams, R. D., Agogino, A. highlights
K., Quinn, R. D., & SunSpiral, V. (2015). Goal-Directed
CPG-Based Control for Tensegrity Spines with Many
Page 44 of 106
Portfolio
Central Restaurante
Virgilio Martinez
Peruvian chef Virgilio Martínez-Vélez chooses to ap- passionate about travelling and investigating ingre-
proach the diversity of our ingredients in a manner dients that can bring undocumented and yet even
similar to that used by the peoples of the Andes in more wealth to the local cuisine. He does so, through
pre-Hispanic times: through vertical ecological mon- a number of areas: ocean, lower Andes, extreme alti-
itoring. According to this alternative way of under- tude, and high and low jungles. He also has an inter-
standing the geography, land is perceived not as a disciplinary team that complements each new “dis-
horizontal plane but rather vertically, so that it takes covery” in a necessary context that seeks to transcend
advantage of all that the flora and fauna are able to the strictly culinary and penetrate nutritional, biologi-
deliver according to the particularities of each eco- cal and anthropological aspects.
logical system. As a result of the dramatic fluctuations
in the Andean terrain in a relatively small radius of
100 kilometres (for many farmers this is not a difficult Could you tell us about how you are inspired by
hike), there is direct access to the country’s products nature?
from various altitudes ranging from the coast to the
In many ways, biodiversity is key for us, we live
Amazon.
in one of the most biodiverse places on earth
Motivated by an insatiable curiosity and interest in where different microclimates coexist and pro-
conveying the complexity of their land, Virgilio is vides us products, connection, and wisdom.
Seeing the world in altitudes help us to under-
stand nature, in the way that we explore our ter-
ritory going up and down, from the sea, to the
Andes, and to the jungle.
Page 46 of 106
tinez: the linking of the cultural and biological
diversity of Peru with a culinary experience. In
this search, Virgilio Martinez and a group of re-
searchers travel to the countryside and com-
pile the histories of these products, but above
all, the histories of the life which give meaning
to the inseparable union of the diversity of our
land and Peruvian gastronomy. In this way, Ma-
ter was born, with the goal of sharing valuable
information about Peruvian products with chefs
and the public in general – now not only inter-
ested in good eating, but also in the knowledge
of the origin of those local ingredients included
on the menus. It seeks, in this way, to contribute
meaning to the task of our producers and their
knowledge, which form the base of our diversity.
Mater is the foundation of all we do, the soul of
our work in a way. We register ingredients, tradi-
tions and methods in their origin, it allows us to
understand our territory, our people, and mostly
gives us the consistency for the future.
Virgilio Martinez
Photography Jimena Agois
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Andean Plateau - Altiplano y Ceja | Photography Central Restaurante
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Colors of Amazonia - Colores de Amazonía | Photography Central Restaurante
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Tree Skins - Pieles de Árbol | Photography Central Restaurante
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River Cotton - Algodón de Río | Photography Central Restaurante
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Marine Soil - Suelo de Mar | Photography Central Restaurante
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Jungle Scales - Escama de Selva | Photography Central Restaurante
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Low Andes Mountains - Cordillera Baja | Photography Central Restaurante
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Harvest and Collection - Cosecha y recolección | Photography Central Restaurante
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Science of Seeing
The Abominable
Mystery
Adelheid Fischer
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Joshua Tree National Park| Photo: Christopher Michel;, 2014 | Flickr cc
graceful form [that] makes them to the traveler nature by which honey bees pollinate flowers,”
the most repulsive tree in the vegetable king- Smith observes. The story goes something like
dom.” this. Following cues that are mysterious to sci-
entists, adult moths time the emergence from
But Fremont is the exception rather than the
their underground chambers to coincide with
rule. In 1936 the desert botanist Susan McKel-
the spring blooming of yucca flowers. The male
vey declared in unabashed wonder that “one
and female moths, which on Joshua trees are ac-
would not be surprised to see a huge prehistor-
tive during the day, stick close to the plants as
ic monster standing by and feeding upon the
they conduct their reproductive rites. When the
fruit.” McKelvey wasn’t the only one who was
mated female is ready to lay her eggs, she will
forced to raid her imagination to find a suitable
visit the stamen of a yucca flower to scrape pol-
description for the fantastical forms of Joshua
len from the anthers. She shapes the sticky pol-
trees. It is said that the children’s book author
len into a ball and uses a unique tentacle-like
and illustrator Dr. Seuss used them as a model
structure attached to her external mouth parts
in his 1971 book The Lorax for his much-belov-
to grasp the pollen as she embarks on her egg-
ed Truffula Trees, a mythical species of gangly
laying mission. The moth visits yucca after yucca,
plants crowned with a cartoonish mop of leaves.
using a sharp tip at the end of her abdomen to
By far the most enthusiastic fan of yucca plants, pierce the pistil, or female part of the flower, and
however, was none other than Charles Darwin. deposit several eggs on the ovules, or undevel-
I thought of Darwin as I ventured into the field oped female germ cells.
with Smith the day after my arrival in camp.
Before flying off, however, the female moths
Surely he would have given both his firstborn
make sure that their progeny will be well pro-
and his eye teeth to have stood beside Smith as
visioned with food. Crawling to the top of the
he clipped flowers from the zig-zaggy branches
pistil, they deposit pollen onto the flower’s stig-
of Joshua trees in search of their resident polli-
ma, triggering fertilization and the subsequent
nating moths. Ninety percent of all land plants
production of seeds that will feed the develop-
are pollinated by insects, Smith points out, in-
ing larvae. Each blossom is marked with a pher-
cluding the dozens of species of yucca plants
omone, an olfactory stop sign that discourages
that cover a range from Guatemala north to Al-
other moths from laying their own eggs. Dar-
berta, Canada. Most of these yuccas rely on their
win was so taken by reading Riley’s account of
own particular species of moth for pollination.
this intentional act of pollination that in an 1874
But yucca moths take the act of fertilization to
letter to his dear friend and colleague Joseph
a whole new level, as the great American ento-
Dalton Hooker, director of the Royal Botanical
mologist Charles Valentine Riley described in a
Gardens, Kew, he rhapsodized that the win-win
news-breaking account in 1873.
transaction between yuccas and their moths
There are two words that describe the process of was the “most wonderful case of fertilisation
pollination by yucca moths: deliberate and me- ever published.”
thodical, a “far-cry from the almost accidental
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A female yucca moth (Tegeticula synthetica) pollinating a Joshua flower | Photo: Christopher Smith©, 2014
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zq20
vol 3 | 2017 The Science of Seeing Author:
The Abominable Mystery Adelheid Fischer
Clearly, Smith thinks so too. Despite the fact that these drab, unimpressive insects wield an influ-
he has examined thousands of blooms over the ence on Joshua trees that far exceeds their tiny
years, Smith pauses with me to marvel over their proportions--and vice versa. Together the yuccas
improbable beauty. In desert environments, and their pollinating moths may be star players
where plants are so parsimonious with moisture in an unfolding coevolutionary drama whose
that most of their parts are leathery, spiny, dry outcome is nothing less than the creation of new
or sandpapery, Joshua tree flowers seem almost species on earth. And when it comes to coevo-
recklessly profligate. Sprouting from the plants’ lution, few stories are more classic than the one
branch tips are dense, artichoke-like flower about the giant Joshua trees and its diminutive
heads that have the size and heft of a small, partner.
ripe cantaloupe. Each one contains tens of lus-
Interest in the evolutionary history of Joshua
cious, ivory-colored flowerets that are so thick
trees dates back to the work of early 20th-cen-
and smooth to the touch that they seem to have
tury field botanists who noted that populations
been cast of wax. You might expect that such
in the western reaches of the plants’ range,
extravagant blooms would emit a pleasing, ex-
largely in eastern California and Nevada, had a
otic fragrance but their odor is slightly rank and
dramatically different architecture than those in
medicinal, reminding me of the industrial wax
the eastern half of their range, mostly in Arizo-
that was used to polish the floors of my convent
na. Western varieties of Joshua trees, known as
grade school. Nonetheless, Smith points out that
Yucca brevifolia brevifolia, feature tall stems that
the flower parts are edible. He prunes away the
are topped by an asymmetrical crown of branch-
petals of one floweret and offers me the vase-
es. On the other hand, the branches of the more
shaped ovary to taste. It is as crunchy and moist
easterly variety, Yucca brevifolia jaegeriana, be-
as a raw potato and tastes faintly like grass. So
gin sprouting far lower to the ground in a more
nutritious are these blooms that ranchers have
shrublike fashion. Jaegeriana also has shorter
reported to Smith that their cattle grow fat feed-
leaves than Brevifolia.
ing on Joshua tree blossoms in the spring.
But things didn’t get really interesting until re-
But there was a second, even more amazing sur-
cent years when scientists took a closer look at
prise in store. As he peeled away the flowerets
the Tegeticula moths that pollinate Joshua trees.
of one especially large head of blossoms, Smith
They discovered that the body size of pollinat-
spied a female moth diving for cover and quick-
ing moths in the western part of Joshua tree’s
ly captured her in a clear plastic vial. This is the
range were larger overall than those in the east-
yucca moth, I gasped, the star of the pollination
ern part. Even more intriguing was the finding
story that caused Charles Darwin to speak in ex-
that the western moths had longer ovipositors
clamation points? Fluttering in the tube was a
than their fellow eastern moths. In subsequent
khaki-grey moth with silvery wings little more
tests, researchers declared that the differences
than the size of a cucumber seed.
between the moths were not simply morpholog-
Looks, however, are deceiving when it comes to
Joshua tree moths. Smith strongly suspects that
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Yucca
JoshuaMoth
Tree (Yucca
| Photo:brevifolia)
Judy Gallagher,
panicle2012
| Photo:
| Wikimedia
Takwish,Commons
2008 | Wikimedia Commons
ical but genetic as well and in 2003 divided them of laying eggs) was shorter by almost half in Jae-
into two separate species: Tegeticula antithetica geriana than in Brevifolia. Then he measured the
in the east and Tegeticula synthetica in the west. ovipositors of the two species of yucca moths
and discovered that “amazingly, the length of
Scientists also began to look more closely at the
the stylar canal in each tree variety matches
differences between the two varieties of Joshua
exactly the body length of their respective pol-
trees as well. They hypothesized that the two
linators,” Smith writes. These differences have
varieties took separate evolutionary paths af-
important implications for the reproduction of
ter their range was bisected some five million
both yucca varieties. In Nevada’s Tikaboo Valley,
years ago by an inundation from the Sea of Cor-
an unusual site where Jaegeriana and Brevifo-
tez known as the Bouse Embayment. They point-
lia grow side by side, Smith and his colleagues
ed to similar genetic differences in easterly and
have conducted experiments showing that the
westerly populations of animals ranging from
two species of moths visit both yucca varieties.
desert tortoises and spiders to snakes.
However, their reproductive success is severe-
Subsequent genetic tests revealed, however, ly diminished or fails outright when one spe-
that the two varieties of yucca had diverged cies carries out pollination in the Joshua tree to
from a common ancestor prior to the incursion which it is not best adapted.
by the Bouse Embayment. “I got excited when I
With each experiment in the great outdoor labo-
saw that the Bouse Embayment was not caus-
ratory of the Mojave Desert, Smith and his col-
ing speciation [the formation of new species],”
leagues are getting one step closer to solving
Smith recalls. The revelation prompted Smith
one of the scientific conundrums that would
to take another look at the pollination biology
vex Darwin until the day he died and continue
of yuccas and moths and begin investigations
to puzzle evolutionary biologists to this day: the
of a long-standing and tantalizing idea in evo-
sudden appearance and explosion of flowering
lutionary biology instead: that pollinators can
plants that occurred during the Mesozoic at a
drive plant diversification and, therefore, the for-
time when flowerless plants such as pine trees,
mation of new species. Making a hard-and-shut
ferns, mosses and horsetails had dominated the
case for the idea, however, “has turned out to be
fossil record for millions of years before them.
really hard. People have tended to get contradic-
Darwin, like other scientists of his time, specu-
tory results in both theoretical and empirical re-
lated that the rise in insect diversity around the
search,” Smith observes.
same time played an important role in catalyz-
Instead of looking at the pronounced differenc- ing the diversity of flowering plants. Studying
es in the architecture of the two yucca varieties, the pollination biology of Joshua trees and their
Smith began by focusing his attention on analyz- moths might provide the smoking gun demon-
ing the structure of the flowers. A close exami- strating coevolution at work in the process by
nation of plant parts revealed that the length which “plants affect the fitness of the insect,
of the style (the tube through which the female that these same insects affect the fitness of the
yucca moth inserts her ovipositor in the process plant, and that together these have caused the
Page 78 of 106
formation of new species,” Smith writes. As yet,
he hasn’t definitively solved what Darwin called
the “abominable mystery”, but with each field
season, he’s one step closer. ⊗
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Interview
Tim McGee
Timothy R. McGee is the founder of LikoLab, a bio- building on the interaction between biology and de-
logical insights studio on Bainbridge Island, WA. At sign. Tim regularly facilitates workshops on design re-
LikoLab, Tim helps people create positive impact for search, biomimicry, and is also currently an adjunct
themselves, their organizations, and the world by us- professor at MCAD teaching Foundations of Sustain-
ing cutting edge design research, foresight, and sus- able Design. Tim holds a BA in Biology from Colby Col-
tainability principles to guide projects towards more lege, and a MS in Biochemistry and Molecular Biology
valuable, and broadly beneficial outcomes. Tim has from the University of California Santa Barbara. When
helped teams develop new materials, manufacturing not in the studio Tim is with his family hunting the
processes, innovation routines, business strategies, woods for edible mushrooms, fiddling with camera
and digital applications. Tim delights in the challeng- equipment, or dipping his toes in the ocean.
es of new projects and industries, and has worked in
aerospace, automotive, architecture, urban planning,
healthcare, high-tech, fashion, textiles, consumer What are your impressions of the current state of
goods, and retail. biomimicry/bio-inspired design?
Tim is also the co-founder of Biomimicry New Eng- It’s tough to feel the edges of an idea. Sitting
land, a non-profit that works to establish nature and on a small island in the Salish Sea, I can say that
natural systems as an important resource for educa- what I see is that bio-inspired design seems to be
tion and innovation in New England. Prior to LikoLab growing and blurring. One of the reasons I start-
Tim spent time at IDEO (a global design firm) and Bi- ed the podcast ‘Life-Centered’ (https://itunes.
omimicry 3.8 (a global biomimicry consulting firm) apple.com/us/podcast/life-centered-podcast-
likolab/id1154841365?mt=2) was to understand
and grow awareness of the incredible diversity
of people working in the field. From artists like
Betsy Hinze, who take people on a magical jour-
ney through art and food to learn about place,
to global policy and business leaders like Tariq
Al Olaimy who speak about adding nature as a
partner at the United Nations. We talk to busi-
ness leaders like Buero Co-founder Ben Kneppers
whose system perspective and deep empathy for
the problems of the Chilean fishing industry led
him to create a process to remove ocean waste,
and create a new circular product. Or Asheen
Phansey who works as an intrapreneur within
Dassault Systemes that literally helps make the
objects we use every day.
I think that the ideas, process and tools of look-
ing to nature are continuing to adapt and evolve
Tim McGee
Photo courtesy of Tim McGee
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untitled | Photography Kathy Zarsky | unwhirl.com
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vol 3 | 2017 Interview Author:
Tim McGee
in different fields. Chemists are increasingly able been fascinating to watch, and my hope is that
to find a link to biology for inspiration. Design- we can increase the community’s ability to ob-
ers are asking questions based on biological in- tain increased funding and execute on designs
sights. Strategists and Marketing professionals and projects that have real economic, human,
are rethinking how they tell stories and imple- and environmental impact.
ment new system based on nature’s complex
adaptive examples. There are architects and ur-
ban planners asking how we can re-wild, and re- By what criteria should we judge the work?
connect with place to make our cities healthy for
One of the most exciting developments in the
us and the environment. And I think most im-
past few years is the emergence of the Interna-
pressively we have seen students of all ages find
tional Living Future Institute’s new Living Prod-
biomimicry one of the most exciting and engag-
uct Certification. For the first time, we see a
ing ways to learn and develop. I think more peo-
comprehensive system through which products
ple are realizing the true power of bio-inspired
can grow, evolve, and learn how to be generous
design isn’t necessarily in finding inspiration,
within the biosphere. I would love to see this
but helping all of us ask better questions.
program continue to capture more industries,
technologies and markets. But to put it simply, I
would ask three big questions. How many peo-
What do you see as the biggest challenges?
ple does it help? How does it help them? How
I would like to see dramatic increases in access does it help the systems those people are in? If
to funding and organizations dedicated to col- we can start to answer those questions for the
lective and clear impact. When it comes to fund- things we make, I think we will be in a better
ing, the opportunities that exist in bio-inspired position moving forward.
design are often so disruptive they fall off the
map of typical innovation pathways. There have
recently been a few venture firms like OS Fund What are you working on right now?
that seek to fund companies that change how
I’m in a bit of a transition point in my career
our society operates, and of course government
where I’m looking at where I can have the most
programs like DARPA exist, but their fluency in
impact. I’m deeply interested in helping people
bio-inspired design tends to fall short of the
imagine different future possibilities. Nature is
deep technological impact that looking to na-
much more weird and wonderful than we can
ture can really have. Fundamentally, they rely on
imagine, and I have been exploring how I can be
more traditional strategies of technological or
a better mentor to others (rather than instructor
human centered innovation to make decisions
or consultant) to help teams get deeper results
of funding rather than a more comprehensive
faster. This has meant literally being a mentor
pathway that considers the broad impact of
to biomimicry teams through the Biomimicry
these technologies on our local and global sys-
Student Challenge, but also working with com-
tems. The Biomimicry Institute’s efforts have
panies to help them achieve Living Product Cer-
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untitled | Photography Tim McGee | unwhirl.com
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untitled | Photography Tim McGee | unwhirl.com
Page 90 of 106
tification, or use living organisms and systems book can help parents, but is also sage advice
as a foresight tool. I’m also exploring how I can for anyone looking to work with others to learn
share and develop tools that the community can from nature.
use to grow and develop for free, so that all of
us can make high quality products, faster. Two of
my most recent projects in this avenue are the What’s your favorite motto or quotation?
podcast ’Life-Centered’, where I get to interview
“Against the assault of laughter, nothing can
and explore topics in depth with leaders in the
stand.” - Mark Twain
field, and ‘unwhirl.com’ (http://www.unwhirl.
com/) which is a website where folks in the bio-
inspired design community can share their bio-
What is your idea of perfect happiness?
inspired, functional photographs or illustrations
free of attribution or charge. Wool socks & a fresh pot of coffee
Page 92 of 106
Interview
Jan Knippers
Jan Knippers specializes in lightweight structures for on advanced building structures. The aim here
roofs and façades, as well as the use of innovative ma- is not the linear and direct transfer from biolo-
terials such as glass-fiber reinforced polymers. He is gy to engineering, which would be a quite naïve
also partner and co-founder of Knippers Helbig Ad- way of understanding biomimicry in the realm
vanced Engineering with offices in Stuttgart, New of building construction, but rather the compari-
York City (since 2009) and Berlin (since 2014). The son of design and construction principles in na-
focus of their work is on efficient structural design ture and in architecture. The idea is to deepen
for international and architecturally demanding pro- my own approch to engineering by investigat-
jects. Since 2000 Jan Knippers is head of the Institute ing structures and systems outside of existing
for Building Structures and Structural Design (ITKE at paradigms of architecture and engineering. My
the faculty for architecture and urban design at the aim is to find inspiration for building structures
University of Stuttgart and involved in many research of improved efficiency and performance.
projects on fiber based materials and biomimetics in
architecture. As such, he is speaker of the Collabora-
tive Research Centre ‘Biological Design and Integra- How have you developed your interest in this
tive Structures’ funded by the German Research Foun- area?
dation (DFG) and author of numerous publications
My primary interest is how computational fab-
such as the ‘Construction Manual for Polymers and
rication methods enable novel building struc-
Membranes’. Jan Knippers completed his studies of
tures. Computational fabrication allows for local
civil engineering at the Technical University of Berlin
differentiation of geometrical features as well as
in 1992 with the award of a PhD.
mechanical and chemical properties. Local adap-
tion may be considered as the main feature of
all natural constructions. My hope is therefore
What is your best definition of biomimicry?
to find directions for development and research
For me, the study and analysis of biological role on building structures through investigation of
models is a line of research parallel to my work natural constructions.
Page 94 of 106
Compliant
Egg of Red shading
Knot Calidris
system ‘flectofin’
canutus | Photo:
| Photography
Didier Descouens,
Julian Lienhard
2012 | Wikimedia Commons
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Egg of Curlew Sandpiper Calidris ferruginea | Photo: Didier Descouens, 2012 | Wikimedia Commons
Page 96 of 106
Thematic Pavilion EXPO 2012 Yeosu, South Korea By Soma Architecture and Knippers Helbig. | Photography Knippers Helbig
Page 98 of 106
working principles. The scientific foundation of scarce natural resources and their efficient con-
architecture is in general low. This is true in par- version into physical elements. All processes in
ticular for the so-called biomorphic architecture. nature are essentially based on the use of solar
What is still missing is a conceptual foundation energy in various forms. Living beings are part of
of biomimetics as a scientific discipline in the large energy and material cycles in the bio- and
realm of architecture and building construction. geosphere. All ‘waste’ is used in a cascade-like
manner by other organisms.
These are general principles that are also pur-
What do you see as the biggest challenges?
sued in today’s architecture and building con-
The biggest challenge of biomimetic research for struction industry. Whether these ecological
architecture is scaling up, not only in terms of properties can be transferred via a bio-inspired
size, but also in terms of loading and life span. design process to architecture and building con-
Architectural constructions are in most cases not struction is the key criteria to evaluate biomi-
only much larger than biological role models, metic research.
they also have to carry much higher loads and
the expected life span is usually much longer.
In addition, architectural constructions require From the projects you have completed, which one
a very high safety levels and low deformations is your favorite? Why?
compared to most natural constructions.
My favorite is the ‘Thematic Pavilion’ at the EXPO
2010 in Yeosu, Korea, as it is one of the very rare
examples that illustrate how fundamental re-
What areas should we be focusing on to advance
search in biomimetics can lead to new architec-
the field of biomimicry?
tural applications on a large scale. The design of
We need fabrication techniques that allow for the compliant kinetic facade made of fibre re-
local differentiation of material properties as inforced composites is inspired by research on
well as of geometrical features of its compo- plant movements, mainly the bird of paradise
nents on the large scale of building construc- flower.
tion, for example the on-site robotic fabrication
processes of fiber composite structures we are
currently working on. What are you working on right now?
We continue to work on fibre-composites as
most natural constructions consist of fibers
By what criteria should we judge the work?
such as cellulose, chitin or collagen with direct-
Evolution in biology follows guiding principles ed properties embedded in a matrix.
that have the potential of pushing architecture
A variety of examples such as bone or wood ad-
and building technologies towards a more sus-
just to the existing loading conditions by adap-
tainable direction: the efficient utilization of
tive and anisotropic growth. Anisotropy leads to
highly efficient structures and to the most effi- Biomimicry/bio-inspired design is by nature a
cient usage of natural resources. Even partly con- multidisciplinary discipline. How do you manage
tradicting requirements, such as high stiffness or collaboration between specialists in your institu-
high toughness to avoid crack propagation, can tion?
be fulfilled through adapted orientation of the
We established a collaborative framework for
various fiber layers and the embedding matrix
previously isolated activities by founding the
material. We continue to work on the develop-
Collaborative Research Centre ‘Biological Design
ment of fabrication techniques that capture this
and Integrative Structures’, funded by the Ger-
potential.
man National Science Fundation DFG. We have