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Organizing principles
Barbara Marte, Senior Editor, Nature
REFERENCES
FURTHER READING
Sander, K. & Faessler, P. E. Introducing the Spemann–Mangold organizer: experiments and
insights that generated a key concept in developmental biology. Int. J. Dev. Biol. 45, 1–11
(2001) PubMed
Gilbert, S. F. Developmental Biology 7th edn: 317–321 (2004) FREE
REFERENCES
ORIGINAL RESEARCH PAPERS
V ogt, W. Gestaltungsanalyse am A mphibienkeim mit ortlicher V italfarbung. II. Teil
Gastrulation und Mesodermbildung bie Urodelen und A nuren. Wilhelm Roux Arch.
Entwicklungsmech. Org. 120, 384–706 (1929)
Le Douarin, N. M. Particularites du noyau interphasique chez la Caille Japonaise (Coturnix
Coturnix Japonica). Bull. Biol. Fr. Belg. 103, 435–452 (1969) PubMed
FURTHER READING
Conklin, E. G. The organization and cell lineage of the ascidian egg. J. Acad. Nat. Sci. Phil. 12,
1–119 (1905)
Smith, J. C. & Malacinski, G. M. The origin of the mesoderm in an anuran, Xenopus laevis, and a
urodele, Ambystoma mexicanum. Dev. Biol. 98, 250–254 (1983) PubMed
Lundmark, C. Role of bilateral zones of ingressing superficial cells during gastrulation of
Ambystoma mexicanum. J. Embryol. Exp. Morphol. 97, 47–62 (1986) PubMed
Clarke, J. D. W. & Tickle, C. Fate maps old and new. Nature Cell Biol. 1, E103–E109 (1999)
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Schoenwolf, G. C. Cutting, pasting and painting: experimental embryology and neural
development. Nature Rev. Neurosci. 2, 763–771 (2001) A rticle
Gilbert, S. F. Developmental Biology 7th edn: 308–309; 348–351 (2004) FREE
FURTHER READING
Poulson, D. F. The effects of certain X-chromosome deficiencies in the embryonic
development of Drosophila melanogaster. J. Exp. Zool. 83, 271–325 (1940)
Poulson, D. F. in Biology of Drosophila (ed. M. Demerec) 168–274 (1950)
Poulson, D. F. in D. Mel. D. I. S. 42, 81 (1967)
Fehon, R. G. et al. Molecular interactions between the protein products of the neurogenic loci
Notch and Delta, two EGF-homologous genes in Drosophila. Cell 61, 523–534 (1990) A rticle
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Gilbert, S. F. Developmental Biology 7th edn: 166–168 (2004) FREE
Milestone 4 (1952)
Alan Turing's 1952 paper 'The Chemical Basis of Morphogenesis' — his last
before committing suicide in 1954 — might not appear on everyone's list
of Milestones as it fails to answ er any specific question in developmental
biology. How ever, by show ing that patterns could be generated by simple
chemical reactions, together w ith diffusion, it marked a change in how the
processes of development w ere view ed. It also contains the first
applications of computer modelling in biology.
Turing attempted to discover how the
symmetry of a homogeneous mass of
identical cells could be broken to form a
particular pattern of tw o or more spatially
distinct cell types. He saw that, if the
differentiated state w as more
thermodynamically stable than the
homogeneous state, then any small
deviations from complete homogeneity, such
as w ere produced by the stochastic
fluctuations that occur all the time, w ould be
amplified and homogeneity w ould be lost.
To set up this kind of instability, Turing
investigated a hypothetical situation in
w hich cells produced tw o or three different 'morphogens' — freely-
diffusing molecules that controlled their ow n production and the cells'
subsequent development. In the tw o-morphogen case, the first diffused
slow ly and enhanced morphogen production, and the second diffused
more quickly and w as inhibitory. This scheme could be applied to a ring of
cells using “relatively elementary mathematics”.
Turing also had, at his disposal, Manchester University's new ly installed
Ferranti Mark I, the first ever commercially available computer. W ith this
he show ed that depending on the values assigned to the model's
parameters, six different classes of self-organizing pattern could result,
some reminiscent of biological structures. The most evocative had
standing w aves of morphogen around the ring, reminding Turing of the
distribution of tentacles around a hydra or the distribution of petals in a
flow er.
By considering a sphere of cells, Turing also modelled the blastula stage
of embryo development, a point at w hich some embryos begin patterning.
Here, the equations predicted a single, randomly positioned area of
maximum morphogen concentration, w hich could be identified w ith the
vegetal pole formed by amphibian and sea-urchin embryos.
Although no event in embryogenesis has been found that relies on the
exact scheme that Turing outlined, reaction–diffusion models of the Turing
type have been w idely explored. Most notably, Alfred Gierer and Hans
Meinhardt show ed that the more general case of local self-enhancement
coupled w ith longer-range inhibition w as not only sufficient but, in fact,
necessary for pattern formation to occur. Many processes in both animals
and plants depend on such Turing–Gierer–Meinhardt mechanisms.
That is not to say that Turing's original proposal w ouldn't w ork. In the
early 1990s, purely chemical systems producing Turing patterns w ere
developed and 5 years later, a natural Turing pattern w as found on the
skin of an angelfish. How ever, the significance of Turing's paper is not in
w hat it says — although anyone trying to present highly mathematical
arguments to a non-mathematical audience should read it as an object
lesson on how it should be done — but rather for its demonstration that
development could be approached in a quantitatively rigorous fashion.
REFERENCES
FURTHER READING
Meinhardt, H. Different strategies for midline formation in bilaterians. Nature Rev. Neurosci. 5,
502–510 (2004) A rticle
Gilbert, S. F. Developmental Biology 7th edn: 18–21 (2004) FREE
Milestone 5 (1952)
Dolly the sheep — that cuddly media darling of the late 1990s — actually
came 35 years after w hat w as perhaps an even more significant cloning
breakthrough: a much less-feted 1960s amphibian, that might have been
dubbed Molly the frog had the popular press been on the case back then.
The legacy of Dolly and Molly is that w e now know that it is possible to
turn back developmental time and make a complete organism from a
nucleus taken from an adult cell. It is difficult to imagine breakthroughs in
developmental research that could have greater social and medical
repercussions in future than these.
The groundw ork for these crucial
breakthroughs w as laid more than 50
years ago. In 1952, Robert Briggs and
Thomas King, w orking on a frog, Rana
pipiens, became the first to successfully
transplant living nuclei in multicellular
organisms. They transplanted blastula
nuclei into enucleated eggs, w hich then developed into normal embryos.
This w as a huge technical breakthrough and provided a spur for those
interested in finding out exactly w hat caused the changes seen during cell
differentiation.
How ever, the successful transplants that Briggs and King performed w ere
of undifferentiated nuclei. Until it w as possible to accomplish the same
feat w ith a differentiated nucleus, it w ould remain an open question as to
w hether the genome itself somehow changed during development or
w hether it w as the w ay genes w ere expressed that w as responsible for
differentiation.
It w as John Gurdon's w ork on Xenopus laevis in the late 1950s and early
1960s, culminating in his seminal 1962 paper, that resolved this
conundrum: genes w ere not lost or changed during cell differentiation —
they w ere just differentially expressed. In his landmark study, Gurdon
transplanted intestinal epithelium-cell nuclei from Xenopus tadpoles into
enucleated frog eggs and managed to produce 10 normal tadpoles: Molly
and her fellow clones. The logical consequence of Gurdon's success — that
the nuclei of differentiated cells retain their totipotency — provided a key
conceptual advance in developmental biology. How ever, Gurdon didn't
immediately receive the universal acclaim he deserved.
The problem w as that Briggs and King's earlier w ork on Rana pipiens
indicated that nuclear transfer might not be able to reverse embryonic
stem-cell differentiation, so many w ere sceptical about Gurdon's success
in Xenopus. How ever, Gurdon's subsequent production of normal fertile
adult animals from eggs w ith genetically marked nuclei transplanted from
differentiated tadpole cells silenced the detractors. It proved once-and-
for-all that the genome remained intact during differentiation and that the
epigenetic changes to the somatic-cell nucleus w ere reversible.
It w as more than three decades before a breakthrough of a similar
magnitude to Gurdon's w as to come. The year before their landmark 1997
publication, Ian W ilmut and his team managed to clone a sheep from an
embryo-derived cell line that they induced to be quiescent. How ever, the
real breakthrough came w hen they successfully applied a similar strategy
to produce a normal sheep cloned from adult cells.
The scientific and social implications of this success w ere huge. Although
Gurdon's seminal amphibian w ork had show n that the nuclei from
differentiated cells could have their developmental clock turned back, Dolly
w as the first clone to be produced from an adult cell. Coupled w ith the
fact that this success came in a mammal, the possibility that humans could
be cloned from adult cells w as an obvious one and saturation media
coverage w as the result.
How ever, the scientific legacy of Briggs, King, Gurdon and W ilmut is a
much broader one: the know ledge that differentiation of a cell is not
irreversible and that nuclei can be reprogrammed has driven expansion of
such fields as stem-cell biology and epigenetics. Moreover, should cloning
fulfill its enormous therapeutic potential, the debt the w orld ow es these
pioneers w ill be equally large.
REFERENCES
ORIGINAL RESEARCH PAPERS
Briggs, R. & King, T. J. Transplantation of living nuclei from blastula cells into enucleated
frogs' eggs. Proc. Natl Acad. Sci. USA 38, 455–463 (1952)
Gurdon, J. B. The developmental capacity of nuclei taken from intestinal epithelium cells of
feeding tadpoles. J. Embryol. Exp. Morphol. 34, 93–112 (1962)
Wilmut, I. et al. V iable offspring derived from fetal and adult mammalian cells. Nature 385,
810–813 (1997) A rticle PubMed
FURTHER READING
Rhind, S. M. et al. Human cloning: can it be made safe? Nature Rev. Genet. 4, 855–864 (2003)
A rticle PubMed
Solter, D. Mammalian cloning: advances and limitations. Nature Rev. Genet. 1, 199–207
(2000) A rticle PubMed
Gilbert, S. F. Developmental Biology 7th edn: 85–90 (2004) FREE
WEB SITES
John Gurdon's laboratory: http://www.welc.cam.ac.uk/groups/gurdon.html
The Roslin Institute: http://www.roslin.ac.uk/
Out on a limb
Heather W ood, Senior Editor, Nature Reviews Neuroscience
If babies could talk, they w ould no doubt testify that hands and feet are
fascinating things. If they w ere in a particularly philosophical mood, they
might — like many developmental biologists — w onder w hy there are five
fingers on each hand, and how the parts of the limb are so neatly
patterned and articulated. Limb development is a key research topic,
w hich encompasses issues of cell differentiation, tissue patterning and
signalling.
W e ow e much of our current understanding of
limb morphogenesis to John Saunders and his
colleagues, w hose pioneering experiments in
chick embryos led to the discovery of key
signalling centres in the limb bud. In 1948,
Saunders had show n that removal of a
thickened layer of ectoderm that rims the distal
tip of the limb bud — dubbed the apical
ectodermal ridge (AER) — causes truncation of
the limb. In a 1957 paper, Saunders, along w ith
John Cairns and Mary Gasseling, grafted
prospective thigh mesoderm from the chick leg
bud to the apex of the w ing bud, and they
found that this mesoderm generated foot
structures if it w as placed in contact w ith the
AER. How ever, if w ing mesoderm w as allow ed
to ingress betw een the grafted tissue and the AER, the grafted mesoderm
retained its thigh identity.
Experiments such as these led to the suggestion that the AER is not only
required for limb outgrow th, but it also provides signals that allow specific
structures to form at different proximo–distal levels of the limb axis. Gail
Martin and colleagues subsequently attributed the signalling activity of
the AER to molecules of the fibroblast grow th factor (FGF) family. It has
become accepted that signals from the AER maintain a population of
undifferentiated cells that give rise to successive skeletal elements of the
proximo–distal limb pattern. How ever, recent findings from the laboratory
of Clifford Tabin indicate that this pattern is not established progressively
during limb-bud development, but instead results from the expansion of
cell populations that are specified in the young limb bud.
Saunders w as also interested in how the antero–posterior pattern of
digits is generated in the limb. In 1968, Saunders and Gasseling identified
a region at the posterior margin of the w ing bud — later termed the zone
of polarizing activity (ZPA) — w hich, w hen transplanted to an anterior
position in the w ing-bud margin, caused a mirror-image duplication of
digits. In 1975, Cheryl Tickle, Dennis Summerbell and Lew is W olpert
proposed that the ZPA releases a diffusible morphogen, establishing a
gradient such that the posterior-most digit arises closest to the source of
the morphogen, and the more anterior digits emerge at sites w ith
progressively low er morphogen concentrations. As retinoic acid (RA) can
mimic the polarizing effect of the ZPA, it w as initially thought that this
might be the morphogen. How ever, Tabin's group show ed that the ZPA
signal is Sonic hedgehog, and that RA primarily induces the formation of
an ectopic ZPA.
The concept of inductive interaction in morphogenesis that w as
formulated by Saunders et al. has proved to be remarkably robust, and it
represents a fundamental model to elucidate the importance of signalling
activity and tissue interactions for the development of complex structures.
REFERENCES
ORIGINAL RESEARCH PAPERS
Saunders, J. W. The proximo-distal sequence of origin of the parts of the chick wing and the
role of the ectoderm. J. Exp. Zool. 129, 5–44 (1948)
Saunders, J. W. et al. The role of the apical ridge of ectoderm in the differentiation of the
morphological structure and inductive specificity of limb parts in the chick embryo. J. Morphol.
101, 57–87 (1957)
Saunders, J. W. & Gasseling, M. in Epithelial–Mesenchymal Interactions (eds Fleischmayer, R. &
Billingham, R. E.) 78–97 (Williams and Wilkins, Baltimore, 1968).
FURTHER READING
Tickle, C. et al. Positional signalling and specification of digits in chick limb morphogenesis.
Nature 254, 199–202 (1975) PubMed
Tickle, C. et al. Local application of retinoic acid to the limb bond mimics the action of the
polarizing region. Nature 296, 564–566 (1982) PubMed
Riddle, R. D. et al. Sonic-hedgehog mediates the polarizing activity of the ZPA . Cell 75, 1401–
1416 (1993) PubMed
Martin, G. R. The roles of FGFs in the early development of vertebrate limbs. Genes Dev. 12,
1571–1586 (1998) PubMed
Dudley, A . T. et al. A re-examination of proximodistal patterning during vertebrate limb
development. Nature 418, 539–544 (2002) A rticle PubMed
Gilbert, S. F. Developmental Biology 7th edn: 534–540 (2004) FREE
Milestone 7 (1963)
Common sense
Jon Reynolds, Assistant Editor, Nature Cell Biology
REFERENCES
ORIGINAL RESEARCH PAPER
Sperry, R. W. Chemaffinity in the orderly growth of nerve fiber patterns and connections. Proc.
Natl Acad. Sci. USA 50, 703–710 (1963) PubMed
FURTHER READING
Meyer, R. L. Roger Sperry and his chemoaffinity hypothesis. Neuropsychologia 36, 957–980
(1998) A rticle PubMed
Gilbert, S. F. Developmental Biology 7th edn: 444–458 (2004) FREE
Milestone 8 (1969)
Shaping destiny
Am anda Trom ans, Senior Editor (News and Views), Nature
The idea of one group of cells telling another w hat type of tissue it should
become — a phenomenon know n as induction — is a familiar theme in
embryonic development. One of the earliest instances of this process is
the formation of mesoderm, w hich, along w ith ectoderm and endoderm, is
one of the three main tissue layers in early embryos. The discovery that
mesoderm is induced from ectoderm, under instructions from endoderm,
dates back to a seminal publication in 1969. It w ould be another 20 years,
how ever, before researchers w ould understand w hat form those
instructions take.
The amphibian embryo is a popular model
organism for developmental biology research.
At early (blastula) stages, the embryo
consists of tw o relatively easily
distinguishable parts — the 'animal' and
'vegetal' hemispheres. W hen excised and
allow ed to develop alone, the animal part
develops into ectodermal tissues, w hereas
the vegetal half forms endodermis. But how
does mesoderm form?
P. D. Nieuw koop tackled this problem through
a series of meticulous dissection experiments.
By excising different portions of Ambystoma
mexicanum (axolotl) blastulae, and culturing them alone or in combination
w ith other portions, he concluded that the mesoderm develops from the
ectodermal (animal) part of the embryo, but requires contact w ith the
endodermal (vegetal) part to do so.
The implication w as that signals released from the vegetal half instruct
the animal half. Over the years, some attempts w ere made to purify the
factors responsible, from embryos and from animal tissues, but w ithout
much success. Then, in 1987, J. M. W . Slack and colleagues published the
results of testing various different grow th factors on ectoderm explants
from Xenopus blastulae. They found that, at low concentrations, basic
fibroblast grow th factor (bFGF) could induce mesoderm, as judged by
histological criteria. Crucially, they also show ed that w hen animal and
vegetal explants w ere cultured together, the addition of heparin could
prevent mesoderm induction — suggesting that the natural mesoderm-
inducing signal from the vegetal half is a molecule that can be inhibited by
heparin. FGF is one such molecule.
Later that year, David Kimelman and Marc Kirschner published the results
of similar experiments. These authors used a different indicator of
mesoderm induction — the levels of mRNA encoding cardiac actin — but
they, too, found that bFGF can induce mesoderm. They also discovered
that transforming grow th factor-β (TGF-β) is required to boost cardiac actin
expression to the level seen normally in embryos. Moreover, they found
that FGF mRNA is present in early embryos. Three years later, J. C. Smith
et al. discovered that in mammals, a likely mesoderm inducer is activin A —
a protein that w as best know n until then for its roles in adult organisms,
butw hich w as now show n to have a similar sequence and activity to a
member of the Xenopus TGF-β family that can induce mesoderm.
REFERENCES
FURTHER READING
Weeks, D. L. & Melton, D. A . A maternal mRNA localized to the vegetal hemisphere in Xenopus
eggs codes for a growth factor related to TGF-β. Cell 51, 861–867 (1987) A rticle PubMed
Gilbert, S. F. Developmental Biology 7th edn: 321–322 (2004) FREE
Reinventing reproduction
Em m a Green, Copy Editor, Nature Reviews Neuroscience
FURTHER READING
Steptoe, P. C. & Edwards, R. G. Birth after the reimplantation of a human embryo. Lancet 2, 366
(1978) A rticle PubMed
Trounson, A . O . et al. Pregnancies in humans by fertilization in vitro and embryo transfer in the
controlled ovulatory cycle. Science 212, 681–682 (1981)
Trounson, A . & Mohr, L. Human pregnancy following cryopreservation, thawing and transfer of
an eight-cell embryo. Nature 305, 707–709 (1983) PubMed
Gilbert, S. F. Developmental Biology 7th edn: 683–686 (2004) FREE
FURTHER READING
Gilbert, S. F. Developmental Biology 7th edn: 251–253 (2004) FREE
Thirty years ago, men w ere men and flies w ere flies and the tw o species
w ere thought to share no more than a handful of genes and a partiality to
bananas. Then came the discovery that so-called 'homeotic genes'
controlled axial patterning, and that their sequence and function w as
conserved betw een distant organisms. The unexpected realization that
vertebrates and invertebrates w ere evolutionarily related through such
an essential developmental process altered the course of developmental
genetics — it turned flies into authorized models for animal development
and kickstarted the field of vertebrate molecular embryology.
It w as Bateson w ho got the ball rolling. In
1894, he described natural variants in
w hich body segments had acquired the
identity of other regions. The phenomenon,
w hich he called 'homeosis', w as show n by
T. H. Morgan to be heritable in flies. But it
w asn't until Ed Lew is put his mind to it 50
years later that the underlying genetics
began to be unravelled. By examining the genotype–phenotype
relationship of homeotic mutations at the fly bithorax cluster of genes (BX-
C) — for example, those that transformed the third thoracic segment into
the second, giving the flies tw o sets of w ings — he reported that the BX-C
consisted of distinct genetic elements and that mutations map in an order
that corresponds to the anterior–posterior (A–P) order of the body parts
that they affect. This feature, called spatial collinearity, w ould turn out to
be a defining feature of both vertebrate and invertebrate homeotic genes.
Lew is show ed remarkable vision by arguing that the identity of an
individual body segment is produced by the particular combination of BX-C
genes, and that these w ere activated in reponse to an A–P gradient.
On the molecular biology front, techniques w ere speeding up. Tw o teams,
one led by Matthew Scott and the other including W illiam McGinnis,
Michael Levine and W alther Gehring, show ed in 1984 that homeotic genes
share a 184-bp sequence called the 'homeobox'. This is translated into a
60-amino-acid DNA-binding motif — the homeodomain — by w hich
homeobox (or Hox) genes bind to DNA and control transcription. It w as
only a short time before the homeobox w as used in homology searches to
pull out more homeotic genes, in flies and farther afield: frogs, chickens,
zebrafish, mice and humans all had Hox genes that, like those of flies,
w ere arranged in clusters. In 1989, Duboule and Dollé and the Krumlauf
laboratory show ed by in situ hydridization that mouse and fly Hox clusters
show ed a similar spatial and functional organization. Not only did genes in
vertebrate and invertebrate clusters have spatial collinearity, but they
w ere expressed in a temporal order that matched their physical order on
the chromosome (that is, they show ed 'temporal collinearity'). In addition,
fly Hox genes — w hich map to tw o adjacent clusters, BX-C and ANT-C —
could, by and large, be matched up w ith genes at similar positions on
each of the four paralogous vertebrate clusters. This w as a remarkable
breakthrough and a vindication of Lew is' belief that all homeotic genes
are evolutionarily related.
Even before the publication of Lew is' Nobel-prize w inning paper, homeotic
phenotypes had led to some surprisingly accurate predictions about how
homeotic 'selector genes', w hich Garcia-Bellido insightfully named and
described, might specify the development of groups of cells. Three
decades on, w e have an astonishing amount of information on the genes
that pattern the axes and segments of an animal — although precisely
how Hox genes combine to produce the numerous, yet stereotypical,
morphological patterns that w e see still escapes us.
REFERENCES
ORIGINAL RESEARCH PAPERS
Garcia-Bellido, A . Genetic control of wing disc development in Drosophila. Ciba Found. Symp.
29, 161–182 (1975) PubMed
Lewis, E. A gene complex controlling segmentation in Drosophila. Nature 276, 565–570
(1978) PubMed
McGinnis, W. et al. A conserved sequence in homeotic genes of the Drosophila A ntennapedia
and bithorax complexes. Nature 308, 428–433 (1984) PubMed
Scott, M. P. & Weiner, A . J. Structural relationships among genes that control development:
sequence homology between the A ntennapedia, Ultrabithorax, and fushi tarazu loci of
Drosophila. Proc. Natl Acad. Sci. USA 81, 4115–4119 (1984) PubMed
Laughon, A . & Scott, M. P. Sequence of a Drosophila segmentation gene: protein structure
homology with DNA -binding proteins. Nature 310, 25–31 (1984) PubMed
Duboule, D. & Dollé, P. The structural and functional organization of the murine Hox gene
family resembles that of Drosophila homeotic genes. EMBO J. 8, 1497–1505 (1989) PubMed
Graham, A . et al. The murine and Drosophila homeobox gene complexes have common features
of organization and expression. Cell 57, 367–378 (1989) A rticle PubMed
FURTHER READING
Garcia-Bellido, A . et al. Developmental compartmentalisation of the wing disc of Drosophila.
Nature New Biol. 245, 251–253 (1973) PubMed
Hafen, E. et al. Regulation of A ntennapedia transcript distribution by the bithorax complex in
Drosophila. Nature 307, 287–289 (1984)
Carrasco, A . E. et al. Cloning of an X. laevis gene expressed during early embryogenesis
coding for a peptide region homologous to Drosophila homeotic genes. Cell 37, 409–414
(1984) A rticle PubMed
Sanchez-Herrero, E. et al. Genetic organization of Drosophila bithorax complex. Nature 313,
108–113 (1985) PubMed
Patel, N. H. et al. Expression of engrailed proteins in arthropods, annelids, and chordates. Cell
58, 955–968 (1989)
González-Reyes, A . & Morata, G. The developmental effect of overexpressing a Ubx product in
Drosophila embryos is dependent on its interactions with other homeotic products. Cell 61,
515–522 (1990) A rticle PubMed
Holland, P. W. H. in Milestones in Systematics: Systematics Association Special Volume Series 67
(eds Williams, D. M. & Forey, P. L.) 261–275 (Boca Raton, Florida, CRC Press; in the press).
Gilbert, S. F. Developmental Biology 7th edn: 377–381 | 754–761 (2004) FREE
Imagine trying to get to the lab first thing on a Monday morning w ithout
your alarm clock and hot show er. It is all too easy to take the technical
achievements around us for granted, although w e w ould quickly be
stopped in our tracks w ithout them. The same is true in research: perhaps
only those w ho have been in the field long enough can truly appreciate
the importance of methods that overcame technical hurdles. In
developmental biology, one of the most significant examples has been the
ability to manipulate gene expression in the w hole animal.
By the early 1980s, it w as possible to alter
expression of specific genes in mammals by
microinjecting DNA into eggs to create
transgenic mice. Rubin and Spradling, w ho
w ere w orking on the fruitfly Drosophila
melanogaster, decided to take a Trojan-horse
approach to the same problem. They took a P
element — a natural transposon vector that is
know n to jump in and out of the fly genome at
w ill — and asked w hether it could be used as
a vehicle to deliver genes of interest into the
genome. In 1982, they show ed that this
approach did indeed w ork: a P element
containing the rosy eye colour gene could
permanently restore normal eye colour in
embryos lacking this gene. The main
advantage over previous microinjection techniques w as that integration of
the P element occurred efficiently and w as stably inherited by progeny.
This basic idea of using P elements as a gatew ay into the Drosophila
genome formed the foundation of most gene manipulation techniques
that have since been developed in the fly: this includes the development
in the 1990s of the FLP-FRT system of mosaic clone analysis by Golic, and
Xu and Rubin, and the Gal4 system by Brand and Perrimon — tw o key
techniques for disrupting gene expression in a small subset of cells, and
for expressing genes ectopically in your cells of choice.
Meanw hile, in the mouse, Capecchi and It was the single
Smithies w ere both busy trying to tackle the discovery that … made
challenge of engineering specific mutations Drosophila an organism
into any gene. The approach they took w as that could take advantage
of advances in
to take advantage of the homologous recombinant DNA
recombination machinery in cells and to make technology and apply
vectors to target a gene of interest. In 1986, them to classical genetics
Smithies rescued a mutation in the human and embryology
beta-globin locus, and in 1987, Capecchi
recalls Matthew Freeman
succeeded in show ing that the Hprt
(hypoxanthine phosphoribosyl transferase)
gene could be knocked out in embryonic stem (ES) cells. This revolutionary
technique had the potential to be used to introduce any type of mutation
in every gene and for the mutant cells to then be stably propagated.
Mutant ES cells could, in turn, be used to generate germ-line chimaeras,
thereby allow ing targeted knockouts or insertions, w hich could alter the
expression of particular genes in the w hole animal.
One challenge in making mouse knockouts even today is the time they
can take to produce. It w as a method initially observed in plants and then
developed in the w orm — RNA interference — that now provides the most
rapid means to inhibit gene expression in mammals. In 1998, Fire and
Mello w ere investigating the potency of different antisense RNAs to
suppress gene expression, and inadvertently discovered that double-
stranded RNAs w ere far more effective. Reminscent of dsRNA viruses that
suppress gene expression in plants, this technique required only a few
molecules of dsRNA and w as inherited non-stoichastically. At the time,
they speculated that the underlying mechanism might entail a catalytic
amplification process.
Over the past 6 years, w e have learnt that RNA interference w orks by
hijacking a molecular pathw ay present from flies to mammals. Its success
has now spread to mammals, follow ing the realization that chopping the
RNAs into smaller fragments (small interfering RNAs or siRNAs) largely
prevents an unw anted interferon response. Although it remains
imperative that care be taken to demonstrate specificity in siRNA
experiments, it is proving to be the most rapid and universal technique for
inhibiting gene expression. In addition, it is now becoming clear that
another regulatory mechanism that also involves small RNAs — the
microRNA pathw ay — affords an additional level of control over gene
expression used by the organism itself, although the breadth of its
functions during development is only now being realized.
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