ResFinder

ResFinder is a database that captures antimicrobial resistance

ResFinder
genes from whole-genome data sets.[1] The database uses
BLAST in order to accomplish this. The database allows Content
inputs of full sequences, partial sequences, or short sequence Description Database of
reads from other sequencing platforms.[1] Additionally, users Antimicrobial
can set their own threshold for detection. By default it is at
Resistance genes.
100% ID. ResFinder pulls from other database such as the
Marilyn Roberts database, the Lahey database (now defunct) Data types Antimicrobial
and ARDB. Other sources include published literature captured Resistance
including reviews.[2][3] Organisms Bacteria
Contact
See also Primary citation PMID 22782487 (http
s://pubmed.ncbi.nlm.n
Antimicrobial Resistance databases
ih.gov/22782487)
Access
References
Website www
1. Zankari, E.; Hasman, H.; Cosentino, S.; .genomicepidemiology
Vestergaard, M.; Rasmussen, S.; Lund, O.; .org. (http://www.geno
Aarestrup, F. M.; Larsen, M. V. (2012-11-01). micepidemiology.org.)
"Identification of acquired antimicrobial resistance
genes" (https://www.ncbi.nlm.nih.gov/pmc/articles/P Miscellaneous
MC3468078). Journal of Antimicrobial Bookmarkable yes
Chemotherapy. 67 (11): 2640–2644. entities
doi:10.1093/jac/dks261 (https://doi.org/10.1093%2F
jac%2Fdks261). ISSN 0305-7453 (https://www.worldcat.org/issn/0305-7453). PMC 3468078
(https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3468078). PMID 22782487 (https://pubmed.
ncbi.nlm.nih.gov/22782487).
2. RATHER, P (1998). "Origins of the aminoglycoside modifying enzymes". Drug Resistance
Updates. 1 (5): 285–291. doi:10.1016/s1368-7646(98)80044-7 (https://doi.org/10.1016%2Fs
1368-7646%2898%2980044-7). ISSN 1368-7646 (https://www.worldcat.org/issn/1368-764
6). PMID 17092809 (https://pubmed.ncbi.nlm.nih.gov/17092809).
3. van Hoek, Angela H. A. M.; Mevius, Dik; Guerra, Beatriz; Mullany, Peter; Roberts, Adam
Paul; Aarts, Henk J. M. (2011). "Acquired Antibiotic Resistance Genes: An Overview" (https://
www.ncbi.nlm.nih.gov/pmc/articles/PMC3202223). Frontiers in Microbiology. 2: 203.
doi:10.3389/fmicb.2011.00203 (https://doi.org/10.3389%2Ffmicb.2011.00203). ISSN 1664-
302X (https://www.worldcat.org/issn/1664-302X). PMC 3202223 (https://www.ncbi.nlm.nih.g
ov/pmc/articles/PMC3202223). PMID 22046172 (https://pubmed.ncbi.nlm.nih.gov/2204617
2).

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