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SYNTHESIS
DR MURIITHI M WARUINGI
NUCLEUS
• IT IS BASICALLY THE CONTROL CENTRE OF THE CELL AND HARBOURS LARGE QUANTITIES OF
DNA.
• A GENE IS A SEQUENCE OF DNA OR RNA THAT CODES FOR A MOLECULE THAT HAS A
SPECIFIC FUNCTION.
• THE BASIC CHEMICAL COMPOUNDS INVOLVED IN THE FORMATION OF
DNA INCLUDE:
• PHOSPHORIC ACID,
Regulatory
region
DNA 5
NUCLEOTIDES;
• 1ST STAGE IN DNA SYNTHESIS IS THE COMBINATION OF ONE
MOLECULE OF PHOSPHORIC ACID, ONE MOLECULE OF DEOXYRIBOSE,
AND ONE OF THE FOUR BASES TO FORM AN ACIDIC NUCLEOTIDE;
• DEOXYADENYLIC, DEOXYTHYMIDYLIC, DEOXYGUANYLIC, AND DEOXYCYTIDYLIC ACIDS
• MULTIPLE NUMBERS OF NUCLEOTIDES ARE THEN BOUND TOGETHER TO FORM TWO STRANDS OF
DNA
• THE STRANDS ARE USUALLY BOUND TOGETHER VIA WEAK HYDROGEN BONDS BETWEEN THE
PURINE AND PYRIMIDINE BASES SUCH THAT;
• EACH PURINE BASE ADENINE OF ONE STRAND ALWAYS BONDS WITH A PYRIMIDINE BASE THYMINE OF THE
OTHER STRAND
• EACH PURINE BASE GUANINE ALWAYS BONDS WITH A PYRIMIDINE BASE CYTOSINE.
GENETIC CODE;
• WHEN THE TWO STRANDS OF A DNA MOLECULE ARE SPLIT APART, THIS
EXPOSES THE PURINE AND PYRIMIDINE BASES PROJECTING TO THE SIDE OF
EACH DNA STRAND, THESE PROJECTING BASES FORM THE GENETIC CODE.
• THE CODE IN THE DNA IS TRANSFERRED TO THE RNA THROUGH THE PROCESS OF TRANSCRIPTION
• THE RNA, IN TURN, DIFFUSES FROM THE NUCLEUS THROUGH NUCLEAR
PORES INTO THE CYTOPLASMIC COMPARTMENT, WHERE IT CONTROLS
PROTEIN SYNTHESIS.
• IF THE GENE TRANSCRIBED ENCODES FOR A PROTEIN, THE RESULT OF TRANSCRIPTION IS MRNA, WHICH
WILL BE USED TO CREATE THAT PROTEIN VIA TRANSLATION
• A DNA TRANSCRIPTION UNIT ENCODING FOR A PROTEIN CONTAINS NOT ONLY THE SEQUENCE THAT
WILL EVENTUALLY BE DIRECTLY TRANSLATED INTO THE PROTEINS, REGULATORY SEQUENCES THAT DIRECT
AND REGULATE SYNTHESIS OF THAT PROTEIN
• TRANSCRPTION IS DIVIDED INTO 3 STAGES;
• INITIATION
• ELONGATION
• TERMINATION
INITIATION
• RNA POLYMERASE IDENTIFIES AND ATTACHES TO PROMOTER REGION( A SEQUENCE OF
NUCLEOTIDES IMMEDIATELY AHEAD OF THE INITIAL GENE)
• THE RNA POLYMERASE HAS AN APPROPRIATE COMPLEMENTARY STRUCTURE THAT RECOGNIZES THIS
PROMOTER AND BECOMES ATTACHED TO IT.
• ESSENTIAL FOR INITIAL FORMATION OF RNA MOLECULE
ELONGATION
• AFTER THE RNA POLYMERASE ATTACHES TO THE PROMOTER, THE POLYMERASE CAUSES
UNWINDING OF ABOUT TWO TURNS OF THE DNA HELIX AND SEPARATION OF THE
UNWOUND PORTIONS OF THE TWO STRANDS.
• THEN THE POLYMERASE MOVES ALONG THE DNA STRAND, TEMPORARILY UNWINDING AND
SEPARATING THE TWO DNA STRANDS AT EACH STAGE OF ITS MOVEMENT. AS IT MOVES
ALONG, IT ADDS AT EACH STAGE A NEW ACTIVATED RNA NUCLEOTIDE TO THE END OF THE
NEWLY FORMING RNA CHAIN
TERMINATION
• WHEN THE RNA POLYMERASE REACHES THE END OF THE DNA GENE, IT ENCOUNTERS A NEW
SEQUENCE OF DNA NUCLEOTIDES CALLED THE CHAIN-TERMINATING SEQUENCE; THIS CAUSES THE
POLYMERASE AND THE NEWLY FORMED RNA CHAIN TO BREAK AWAY FROM THE DNA STRAND. THEN
THE POLYMERASE CAN BE USED AGAIN AND AGAIN TO FORM STILL MORE NEW RNA CHAINS.
POST TRANSCRIPTION MODIFICATION
• AFTER TRANSCRIPTION, EDITING IS DONE TO MAKE THE RNA FUNCTIONAL(BASICALLY CONVERTING
THE PRE MRNA TO A MATURE MRNA
• INTRONS- NON FUNCTIONAL SEGMENTS OF DNA THAT ARE REMOVED
• EXONS- SEGMENTS OF DNA CODING FOR PROTEINS ARE THEN REJOINED BY THE ENZYME LIGASE
• A GUANINE TRIPHOSPHATASE CAP IS ADDED TO THE 5’ END OF THE NEWLY COPIED MRNA
• A POLY A TAIL IS ADDED TO THE 3’ END OF THE RNA
TRANSLATION
• THIS IS THE FIRST PROCESS OF PROTEIN BIOSYNTHESIS, AND INVOLVES PRODUCTION OF PROTEINS
BY DECODING M RNA PRODUCED THROUGH TRANSCRIPTION
• WHEN A “STOP” (OR “CHAIN-TERMINATING”) CODON SLIPS PAST THE RIBOSOME, THE END OF A
PROTEIN MOLECULE IS SIGNALED AND THE PROTEIN MOLECULE IS FREED INTO THE CYTOPLASM.
• RIBOSOMES CONSIST OF TWO PARTS, A LARGE SUBUNIT AND A SMALL SUBUNIT. THEY CONTAIN A
BINDING SITE FOR MRNA AND TWO BINDING SITES FOR TRANSFER RNA(TRNA) LOCATED IN THE
LARGE RIBOSOMAL SUBUNIT
• PROCEEDS IN FOUR PHASES;
➢ ACTIVATION
➢ INITIATION
➢ ELONGATION
➢ TERMINATION
ACTIVATION
• EACH AMINO ACID IS ACTIVATED BY A CHEMICAL PROCESS IN WHICH ATP COMBINES WITH THE
AMINO ACID TO FORM AN ADENOSINE MONOPHOSPHATE COMPLEX WITH THE AMINO ACID
(AMP-AA COMPLEX) GIVING UP TWO HIGH-ENERGY PHOSPHATE BONDS IN THE PROCESS.
• THE ACTIVATED AMINO ACID, HAVING AN EXCESS OF ENERGY, THEN COMBINES WITH ITS SPECIFIC
TRANSFER RNA TO FORM AN AMINO ACID–TRNA COMPLEX( AA-TRNA ),AND AT THE SAME TIME,
RELEASES THE ADENOSINE MONOPHOSPHATE (AMP)
• THE ACTIVATED AMINO ACID, HAVING AN EXCESS OF ENERGY, THEN COMBINES WITH ITS SPECIFIC
TRANSFER RNA TO FORM AN AMINO ACID–TRNA COMPLEX AND, AT THE SAME TIME, RELEASES THE
ADENOSINE MONOPHOSPHATE.
INITIATION
• THE TRANSFER RNA CARRYING THE AMINO ACID THEN COMES IN CONTACT WITH THE MESSENGER
RNA MOLECULE IN THE RIBOSOME- TYPICALLY STARTS AT THE START CODON AUG
• THE ANTICODON OF THE TRANSFER RNA ATTACHES TEMPORARILY TO ITS SPECIFIC CODON OF THE
MESSENGER RNA, LINING UP THE AMINO ACID IN APPROPRIATE SEQUENCE TO FORM A PROTEIN
MOLECULE
ELONGATION
• PEPTIDE BONDS ARE FORMED BETWEEN THE SUCCESSIVE AMINO ACIDS, THUS ADDING
PROGRESSIVELY TO THE PROTEIN CHAIN.
• THIS IS UNDER THE INFLUENCE OF THE ENZYME PEPTIDYL TRANSFERASE.
• THESE CHEMICAL EVENTS REQUIRE ENERGY FROM TWO ADDITIONAL HIGH-ENERGY PHOSPHATE
BONDS, MAKING A TOTAL OF FOUR HIGH-ENERGY BONDS USED FOR EACH AMINO ACID ADDED
TO THE PROTEIN CHAIN.
TERMINATION
• TRANSLATION CONTINUES UNTIL THE STOP CODON(AUG) IS REACHED , AND THE POLYPEPTIDE
CHAIN IS RELEASED.
• THE TRNA MOLECULES ARE USED AGAIN
• THE MRNA MOLECULES ARE ALSO REUSED APPROXIMATELY 10 TIMES BEIFORE BEING REPLACED.
POST TRANSLATIONAL MODIFICATION
• AFTER THE POLYPEPTIDE CHAIN IS FORMED, IT IS MODIFIED TO THE FINAL PROTEIN BY:
a) ONE OR MORE OF A COMBINATION OF REACTIONS THAT INCLUDE HYDROXYLATION,
CARBOXYLATION, GLYCOSYLATION, OR PHOSPHORYLATION OF AMINO ACID RESIDUES
b) CLEAVAGE OF PEPTIDE BONDS THAT CONVERTS A LARGER POLYPEPTIDE TO A SMALLER FORM.
c) FOLDING AND PACKAGING OF THE PROTEIN INTO ITS ULTIMATE, OFTEN COMPLEX CONFIGURATION.
PATHOPHYSIOLOGY OF
PROTEIN SYNTHESIS
DR M W MURIITHI
PRESENTATION OUTLINE
CLASSIFIED INTO:
➢GENOME MUTATION: (WHOLE CHROMOSOME)
➢GENE MUTATIONS-CHANGE IN THE NUCLEOTIDE SEQUENCE OF A GENE
MAY ONLY INVOLVE A SINGLE NUCLEOTIDE
➢CHROMOSOMAL MUTATION-ISSUE WITH CHROMOSOME STRUCTURE
LOSS OR GAIN OF A PART OF A CHROMOSOME.
TYPES OF GENE MUTATIONS
• METABOLIC-CYSTIC
FIBROSIS,PHENYLKETONURIA,GALACTOSEMIA,HOMOCYSTEINURIA,L
YSOSOMAL STORAGE DISEASES,WILSONS
DISEASE,HEMOCHROMATOSIS,
• HEMATOPOIETIC-SICKLE CELL ANEMIA,THALASSEMIAS
• ENDOCHRINE-CONGENITAL ADRENAL HYPERPLASIA,
• SKELETAL-ALKAPTONURIA
SEX LINKED X
• CHROMOSOMAL DISORDERS
• MULTIGENE DISODERS
• SINGLE GENE DISORDERS
REFERENCE