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Article history: Crop acreage analysis and yield estimation are of prime importance in field-level agricultural monitoring
Received 5 September 2021 and management. This enables prudent decision making during any crop failure event and for ensuing
Revised 25 November 2021 crop insurance. The free availability of the high resolution Sentinel-2 satellite datasets has created new
Accepted 16 January 2022
possibilities for mapping and monitoring agricultural lands in this regard. In the present study conducted
Available online 28 January 2022
on the Tamluk Subdivision of the Purba Medinipur District of West Bengal, the heterogeneous crop area
was mapped according to the respective crop type, using Sentinel-2 multi-spectral images and two
Keywords:
machine learning algorithms- K Nearest Neighbour (KNN) and Random Forest (RF). Plot-level field infor-
Machine learning algorithms
Smallholder agriculture
mation was collected from different cropland types to frame the training and validation datasets (com-
Crop acreage prising 70% and 30% of the total dataset, respectively) for cropland classification and accuracy
Betel vine cultivation assessment. Through this, the major summer crop acreage was identified (Boro rice, vegetables and betel
vine- the three main crops in the study area). The extracted maps had an overall accuracy of 97.16% and
97.22%, respectively, in the KNN and RF classifications, with respective Kappa index values of 95.99% and
96.08%, and the RF method proved to be more accurate. This study was particularly useful in mapping the
betel leaf acreage herein since scant information exists for this crop and it is cultivated by many small-
holder farmers in the region. The methods used in this paper can be readily applied elsewhere for accu-
rately enumerating the respective crop acreages.
Ó 2022 National Authority of Remote Sensing & Space Science. Published by Elsevier B.V. This is an open
access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
1. Introduction even more pertinent in the Indian agricultural scenario, since small
and marginal farmers together cultivate about 86% of all operational
Accurate mapping of smallholding agricultural plots is complex landholdings in the country (MoAFW, 2019) and improving their
due to the diversity of smallholder farming systems, constrained economic status can help meet various sustainable development
plot size, crop heterogeneity and the lack of clearly defined, goals (Abraham and Pingali, 2020). The growing demand for crop
updated field boundaries in most land management systems (Liu insurance as part of micro-level agricultural planning, which
et al., 2020). However, such mapping remains the foremost step requires plot-level crop statistics, acreage and yield estimation at
towards monitoring smallholder1 cultivators’ farms, their operation the Tehsil/Block-level, has also augmented the need for such maps.
and crop acreage spatial distribution (Hudait and Patel, 2018). This is However, conducting crop surveys in the field or making estimates
based on interpolation of older/sampled information, is time-
consuming, expensive and erroneous.
Peer review under responsibility of National Authority for Remote Sensing and Advancements in remote sensing now provide accurate, recur-
Space Sciences. ring and timely estimations of crop acreages and yields for effec-
⇑ Corresponding author at: Department of Geography, Presidency University, 86/
tively supporting agricultural decision support systems (Verhulp
1, College Street, Kolkata 700 073, West Bengal, India.
E-mail addresses: manas.rs@presiuniv.ac.in (M. Hudait), priyank.geog@presiu-
and Van Niekerk, 2016). While earlier, it was challenging to differ-
niv.ac.in (P.P. Patel). entiate smallholding plots from medium/coarser images (e.g. from
1
As per the Agricultural Census of India (Phase-I of 2015–16), small/smallholding 30 m Landsat or 23.5 m LISS-III images- Liu et al., 2020), the
farmers own 1–2 ha (0.01–0.02 sq.km) of land, marginal farmers (<0.5 to 1.0 ha) (or Sentinel-2 dataset enables this, due to its large number of bands
<0.005 to 0.01 sq.km), semi-medium farmers (2–4 ha) (or 0.02–0.04 sq.km), medium
and higher spectral and spatial resolution (13 spectral bands of
farmers (4–10 ha) (or 0.04–0.1 sq.km) and large farmers (10 to >20 ha) (or 0.1 to >0.2
sq.km). 10–60 m resolution), especially the inclusion of a red-edge band
https://doi.org/10.1016/j.ejrs.2022.01.004
1110-9823/Ó 2022 National Authority of Remote Sensing & Space Science. Published by Elsevier B.V.
This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
for vegetation analysis (Saini and Ghosh, 2018). In addition, its had distinct boundaries and bluish/grey tones. Natural vegetation
weekly availability allows change detection in near real-time (tree groves) had a rough texture and built-up areas, rivers and
(ESA 2016). These images have thus been much used for crop other waterbodies were also clearly identifiable based on their
area/type delineation and yield prediction (Noi and Kappas, respective tone/texture and associative elements (Zhou, 2019).
2018; Saini and Ghosh, 2018; Neetu and Ray, 2019). The entire dataset was split into training and testing portions, in
Such precision techniques can help analyse the acreage and a 70:30 ratio (Fig. 3).
yield of high value commercial crops grown in large plantations
(e.g. tea/coffee) or within small individual sheds (e.g. betel vine). 3.2. Image datasets
For example, due to their distinctive field alignment or specific cul-
tivation sheds, betel vine plots can be demarcated discretely from Multi-temporal and multi-spectral Sentinel-2 images were used
high resolution images (Hudait and Patel, 2018). This is crucial, to extract LULC classes and map extents under different crop types,
since agricultural statistics are usually recorded only for the major particularly smallholder plots, which require higher spatial resolu-
crops in a region and can under-report the coverage of such high- tion data (10 m) for accurate delineation. Sentinel-2 images have
value smallholding commercial crops. five near-infrared (NIR) and three red-edge bands that enhance
Manual supervised classification of high resolution images is its vegetation mapping capabilities (ESA, 2016). Here, 10 of the
often error-prone due to the diversity of objects and varying image 13 spectral bands (for the list of scenes see Table S1 in Supplemen-
tones/textures. The development of machine learning algorithms tary Information file) were used for LULC classification and extrac-
(MLAs) has facilitated auto-extraction of different land use and tion of the Normalized Difference Vegetation Index (NDVI). All
land cover (LULC) attributes. Two of the most common MLAs used bands were resampled to 10 m resolution for this (following
are the K-means classifier and Random Forest methods (Noi and Immitzer et al., 2016).
Kappas, 2018), which are more accurate than manual supervised
methods (Neetu and Ray, 2019).
3.3. Separability analysis for band selection
Here, we test the applicability of using Sentinel-2 images and
MLAs for distinctly mapping the major food and commercial crops’
Measures of spectral signature separability enable diverse LULC
acreages in a part of eastern India. We chose this area, as it lies in a
classes to be discretized and delineated explicitly in a spectrally
zone of intensive agriculture, wherein croplands are divided into
heterogeneous area (Verhulp and Van Niekerk, 2016). Here, spec-
numerous smallholding plots. It also contains a good mixture of
tral separability (Fig. S2) was used to discern which bands best rep-
different LULC categories and has notable extents under both food
resented distinctions between the various ground-truthed feature
(usually paddy) and cash crops (mostly betel vine). While paddy is
classes extracted earlier and accordingly, the 10 m spatial resolu-
cultivated in open fields, betel vine is grown in distinctive rectan-
tion bands (B2, B3, B4, B8) and the 20 m spatial resolution bands
gular thatched sheds called Boroj (Hudait and Patel, 2018), distin-
(B5, B6, B7, B8A, B11, B12) were used in the classification processes
guished by their tonal and textural properties. The area also has
for ascertaining the respective crop extents more accurately.
several large aquaculture ponds, converted from former fields,
and these should also be extractable from the images.
3.4. Multiple time windows and NDVI analysis
2. Study area Although the spectral nature of the different agricultural fields
is quite similar except for betel vine plantations (as it is grown
Purba Medinipur District is situated in the southern part of inside a constructed shed or Boroj), their respective phenological
West Bengal. Tamluk Subdivision (Fig. 1), the study area, lies in differences can help in identifying the specific time windows dur-
the northern part of the district. It is comprised of Kolaghat, Sahid ing which sufficient spectral differences arise between different
Matangini, Panskura, Tamluk, Moyna, Nandakumar and Chandipur crops, thereby allowing their plots to be distinguished. Here, we
C.D. Blocks. As part of the Gangetic delta’s paddy belt, Tamluk Sub- have enumerated the summer crop acreage (these are the main
division is also famous for its betel leaf crop (ICAR, 1997), regularly crops grown here and have the highest net sown area, as per the
leading its production and sale in this region (Development and Agriculture Evaluation Office, Tamluk), during which season Boro
Planning Department, GoWB, 2011). rice is the dominant crop while vegetables and betel vines also
have substantial acreage. The multi-temporal Sentinel-2 images
3. Materials and methods of the months leading up to summer were examined, based on
prior knowledge of the local crop calendar, as regards when the
3.1. Creating the training and testing datasets summer rice sowing and growing occurs. From these, the NDVI
(Eq. (1)) was extracted to detect the occurring phenological
Fig. 2 outlines the workflow undertaken. Field-based ground- changes for different crops and their variations in different
truthing was done using ground control points (GCPs) obtained locations.
with a handheld GPS. In all, 30 GCPs were collected from each LULC qNIR qRED
class (e.g. paddy fields, vegetable patches, betel vine plots and bar- NDVI ¼ ð1Þ
qNIR þ qRED
ren, gullied or excavated lands) and marked in Google Earth (see
Fig. S1 in the Supplementary Information file). The Google Earth where, qNIR and qRED are the reflectance in the NIR and Red bands,
image dates varied between February 2019 to March 2020, just respectively.
before the survey period. A total of 920 points were generated ran- As per this area’s crop calendar, summer rice (Boro rice) is sown
domly in this way, which comprised the training and test datasets in January and harvested between late April to mid-May (Mandal,
for accuracy assessment of the MLA-based classifications. All the 2017). Since, most summer crops are sown in winter (except betel
present LULC types were represented in these datasets. The paddy vine, which is a standing plantation with some leaves being period-
fields exhibited smooth texture and clear boundaries. Betel vine ically harvested from each plant), we considered image dates from
Boroj/sheds had clear geometric structure (along with a raised December 2019 to April 2020 for the multiple time window-wise
form) and lighter tones. Vegetable growing tracts appeared as NDVI analysis (Fig. 4) to detect the successive crop phenological
clean patches while aquaculture ponds (or their dry remnants) changes. Based on the training dataset signatures, the respective
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M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
mean NDVI value of the various crops (considering all their patches separation. Thus, the image of 10.03.2020 was selected for classifi-
in a particular scene) were extracted. The mean NDVI of rice was cation and crop acreage/extent extraction. This temporal NDVI
maximum in March, although the overall NDVI was highest in analysis helped us identify the mean difference between the crops
April. Pertinently, the mean NDVI of different crops varied mark- over a season, using the collected GCPs and the associated spectral
edly in the March dataset (Fig. 5), which eased the feature class signature of crop locations in the successive images. This is possi-
149
M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
Fig. 3. GCPs taken on the different LULC classes- (a) Training dataset, (b) Testing dataset. Note: LULC legend codes: 1- Rice, 2- Betel vine, 3- Vegetables and Other crops, 4-
Aquaculture, 5- Natural vegetation/Tree groves, 6- Built-up areas and Roads, 7- Other waterbodies, 8- Rivers, 9- Other LULC classes.
bly a quite innovative approach for discerning the different crop independent vector hk is generated for the kth tree from a known
types grown together/alongside in an area. distribution that is randomly independent of the past vectors but
contains the same distribution and a regression tree is formed
3.5. Image classification using the hk and the training set, resulting in an ensemble classifier,
as (Eq. 2) (Tatsumi et al., 2016):
3.5.1. K-nearest neighbour classifier
The K-Nearest Neighbour (KNN) MLA is a non-parametric
h1 (X), h2 (X), ......hk (X) ð2Þ
method (Guo et al., 2018), recognizing the dataset’s occurring pat- where, {hk (X) = h (X, hk), k = 1, . . .}, and X = {x1, x2, . . .. . .., xn} [in
tern. The data point category is determined by the existing classi- which x1, x2, xn are the input vectors]
fication of the nearest K neighbour (Guo et al., 2018), wherein the K Two main parameters were set in this model- ‘ntree’ (number of
sample group closest to the unknown sample is used to classify it, trees to be grown) and ‘mtry’ (number of features to be used in
determining the classifier performance (Wei et al., 2017). Then, the each split). We used the default model parameters following
K value is determined by a bootstrap procedure (Noi and Kappas, Liaw and Wiener (2002) and Immitzer et al. (2016), and split the
2018). Here, we set the default model parameters and evaluated training and testing data in a 70:30 ratio for classification and
the K values from 1 to 10, for choosing the best possible value validation.
for the following classification, with a K value of 7 giving the best
results.
3.5.3. Accuracy assessment
The classification accuracy/classifier performance was judged
3.5.2. Random Forest classifier
from the error matrices provided by the random forest result and
The Random Forest (RF) (Breiman, 2001) is an ensemble and
from the overall accuracy and Kappa index [computed after
non-parametric algorithm that has been much used for crop classi-
Rwanga and Ndambuki (2017)], as (Eq. 3):
fication and yield prediction (Tatsumi et al., 2016; Neetu and Ray,
Pr Pr
i¼1 xii i¼1 ðxiþ i Þ
2019). The ensemble method of the random forest consists of sev- N xþ
Fig. 4. Extracted NDVI values for the different image dates- (a) 31.12.2019, (b) 25.01.2020, (c) 29.02.2020, (d) 10.03.2020, (e) 19.04.2020.
Fig. 5. The average NDVI values of the three main crop types in the different image datasets.
151
M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
producer’s accuracy (PA), user’s accuracy (UA), overall accuracy inant crop, covering 34.09% of the study area as per the KNN clas-
(OA) and the Kappa Statistic (Immitzer et al., 2016). The extraction sification output and 32.10% in the RF-based classification
accuracy of the individual LULC classes was also computed through (Table 1). On the other hand, betel vine covered 1.31% and 1.66%
the F score. These different accuracies measures were tabulated to of the area in the KNN and RF classifications, respectively, and
form the error matrix (Xiong et al., 2016) for each MLA, as follows the vegetable patches and others crops’ (potato, groundnut, moog
(Eq. 4–7): and til) plots together comprised 9.45% and 10.23% of the region
in the KNN and RF classifications.
Sd
OA ¼ 100 ð4Þ Apart from these, the other important LULC classes identified
n
were aquaculture ponds (covering 22.93% and 22.66% of the area
in the KNN and RF outputs, respectively), natural vegetation/tree
Xii
UA ¼ 100 ð5Þ groves (23.98% and 24.03%), built-up tracts and roads (3.39% and
Xi
4.10%), other waterbodies (0.75% and 0.92%), rivers (3.27% and
3.17%) and other LULC classes (0.83% and 1.12%). Aside from the
Xij
PA ¼ 100 ð6Þ discerned extents of the three main summer crops, the mapping
Xi
of the aquaculture extents is essential here, even though it is not
a cropland class. Over the last decade, many paddy plots have been
ðUA PAÞ
F1score ¼ 2 ð7Þ steadily transformed into aquaculture zones, most notably in
ðUA þ PAÞ
Moyna (where the acreage under paddy decreased from 9250 ha
where, Sd is the sum of the correctly classified pixel, n is the sum of to 5000 ha from 2008 to 09 to 22016–17 during which time the
validation pixels, Xij is the observation in the ith row and jth column, extents under aquaculture increased from 1000 ha to 5500 ha-
Xi is the marginal row total of i and Xj is the marginal column total Block Agriculture Office, Moyna Block), Nandakumar and Tamluk.
of j. Mapping this feature can enable tracking of such land use alter-
ation that directly impacts local crop harvests.
Accuracy assessments of the derived LULC outputs (Table S2,
4. Results and discussion
Table S3) revealed the KNN and RF models to have OA values of
97.16% and 97.22%, respectively, and Kappa coefficients of 95.99%
4.1. Crop type classification and accuracy
and 96.08%, with their F1 scores being 74.45% and 75.79%. In each
case, the RF derived classes demonstrated a higher accuracy than
The KNN and RF classifications helped ascertain the location
the KNN based layer. Although the UA and PA values differ for
and extent of each of the different LULC classes and the respective
the different LULC classes in both the KNN and RF classifications,
coverage of the three main crops (Fig. 6, Fig. 7). Rice was the dom-
Fig. 6. Extracted LULC classes- (a) Using KNN Classifier, (b) Using RF Classifier.
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M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
Fig. 7. Coverage of the three main crop types- (a) Extracted using KNN Classifier, (b) Extracted using RF Classifier.
Table 1
Extracted area under the different LULC classes using the two MLAs.
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M. Hudait and Priyank Pravin Patel Egypt. J. Remote Sensing Space Sci. 25 (2022) 147–156
Percent coverage
accuracies were obtained for these classes mainly due to the much
lower intermixing of their pixels with those of other classes,
thereby lessening any misclassification. Comparatively, the betel
vine class has much lower accuracy (28.95% and 33.33%) in both
44.89
7.58
9.93
8.77
4.76
17.01
7.07
RF classification
crops category (55.85% and 68.22%). This occurred due to the smal-
846.53
1109.14
5014.75
531.44
1900.23
980.08
790.04 ler betel vine sheds and the LULC class heterogeneity of their
neighbourhoods, which often contains paddy fields, ponds, kitchen
gardens for vegetables and some built-up spaces.
Percent coverage
8.81
4.96
6.92
larger paddy and smaller betel vine plots and its output can there-
KNN classification
fore be used to produce the crop acreage database of this area. Our
reported accuracies are similar to other such studies done using
Area (ha)
796.54
512.22
713.62
908.88
4658.97
1015.91
1710.91
18.64
18.84
13.39
17.46
8.70
10.05
RF classification
15.14
9.55
12.90
11.02
18.30
13.40
KNN classification
Area (ha)
216.61
191.8
15.58
8.51
7.71
6.69
of the different crops in each of the studied Blocks from 2015 till
RF classification
2019 (Table 4). This data shows a wide fluctuation in crop acreage
across different years. A comparison of our RF model-based
11319.36
2981.79
5883.81
4362.59
2344.16
2702.94
5460.27
Area (ha)
the same.
When examined at the Gram Panchayat level (Table S4),
marked variations are seen in the coverage of the three crops (in-
32.18
16.65
12.58
15.46
8.51
7.87
6.75
KNN classification
6196.68
4683.78
5756.86
2930.67
Area (ha)
2511.6
these two activities is most even in Tamluk Block (47.46% for aqua-
culture and 52.54% for cultivation of rice, betel leaf or vegetables
Sahid Matangini
Chandipur
Moyna
Blocks
Table 4
Year-wise available crop acreage data from published statistics.
The accurate identification of various seasonal crops at the plot Supplementary data to this article can be found online at
level is essential for further agricultural development. The present https://doi.org/10.1016/j.ejrs.2022.01.004.
study discerns the major summer crop types using Sentinel-2 ima-
gery derived multi-temporal NDVI values and two MLAs in Tamluk
Subdivision of West Bengal. The KNN and RF functions used for
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