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Mammalian Glycerophosphodiester Phosphodiesterases
Noriyuki Y ANAKA
Department of Molecular and Applied Bioscience, Graduate School of Biosphere Science,
Hiroshima University, 4-4, Kagamiyama 1-chome, Higashi-Hiroshima 739-8528, Japan
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Online Publication, August 7, 2007
[doi:10.1271/bbb.70062]
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Fig. 2. The Deduced Amino Acid Sequences of the Catalytic Region of Mouse GP-PDEs.
The deduced amino acid sequences of the putative catalytic region of mouse GDE1-7 proteins are aligned for the best match. Identical amino
acid residues are boxed.
GDE
GDE1 N- -C
GDE
GDE2 N- -C
GDE
GDE3 N- -C
GDE
GDE4 N- -C
Carbohydrate binding
domain GDE
GDE5 N- -C
GDE
GDE6 N- -C
GDE
GDE7 N- -C
Fig. 3. Schematic Diagrams Illustrating Domain Structures of the Seven Mouse GP-PDEs.
Putative transmembrane domains are numbered from the N-terminal. GDE represents the putative GP-PDE domain.
action with RGS16 and the expression of GDE1 in II. GDE3 Promoted Osteoblast Differentia-
detail.8,10) Northern blot analysis revealed that GDE1 is tion and Induced Morphological Changes in
widely expressed in mammalian tissues, including the Cells
heart, brain, liver, and kidney. Analyses of the hydro-
phobicity profiles of GDE1 protein indicated that two Osteoblasts are mesenchymal cells derived from bone
distinct hydrophobic regions are located at the N- marrow stromal cells, periosteum, or undifferentiated
terminus and at the C-terminus. Two hydrophobic stem cells in connective tissues.19,20) The process of
regions were also found in GDE4 and GDE7 proteins osteoblast differentiation has been well characterized at
as well as in bacterial GP-PDEs. To investigate the the morphological level. The process can be subdivided
membrane topology of GDE1 further, they employed into three main phases: proliferation, extracellular
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proteinase K protection assays, showing that a catalytic matrix development, and mineralization. Numerous
domain between two transmembrane domains faces investigations have been directed at elucidating the
either the lumen of the endoplasmic reticulum (ER) or regulation of bone formation, and have determined that
the extracellular space.10) In their study, GDE1 protein many genes encoding either transcription factors or
was also shown to be localized mainly on the plasma growth factors are essential for osteoblast differentia-
membrane in the liver and kidney, and in the juxtanu- tion.21,22) MC3T3-E1 cells are a well-established pre-
clear region of cultured pituitary cells and PC-12 cells. osteoblast cell line derived from mouse calvaria, and are
Of much interest to us is the fact that expression of wild- widely used for studies of osteoblast differentiation
type GDE1 in HEK293T cells led to a significant induced by -glycerophosphate and ascorbic acid. In
increase in glycerophosphoinsitol (GroPIns) phospho- order to identify new osteoblast-related genes, we
diesterase activity.10) Because bacterial GP-PDEs are cloned cDNAs that were differentially expressed during
well characterized as exhibiting broad catalytic activity specific differentiation stages in mouse osteoblast-like
and for hydrolyzing glycerophosphocholine, glycero- MC3T3-E1 cells by a differential display method. We
phosphoserine, glycerophosphoethanolamine, glycero- isolated a novel cDNA encoding a putative glycero-
phosphoglycerol, bis (glycerophospho)-glycerol, and phosphodiester phosphodiesterase, GDE3, which is
GroPIns, it is intriguing that GDE1 was found to transiently expressed at the stage of matrix maturation
hydrolyze GroPIns preferentially, with an apparent Km (Fig. 4A).9) The deduced amino acid sequence predicted
of 12 mM and a Vmax of 3;000 pmol/mg/min. A that GDE3 contains 539 amino acids, including seven
substrate competition assay showed that the competitive putative transmembrane domains and a putative glycer-
preference for GDE1 was GroPIns 4,5-bisphosphate ophosphodiester phosphodiesterase region in a large
glycerophosphoserine > GropIns > GroPIns 4-phos- extracellular loop. Northern blot analysis revealed that
phate (GroPIns-4P) glycerophosphoethanolamine GDE3 was also expressed in the spleen as well as in
glycerophosphocholine. It is noteworthy that isoproter- primary calvarial osteoblasts and the femur. We ob-
enol, an agonist for -adrenergic receptors, increases served that green fluorescent protein (GFP)-fused GDE3
GDE1 phosphodiesterase activity toward GroPIns by protein accumulates at the cell periphery in transfected
50% as compared with untreated cells. In contrast, HEK293T cells, and that the transfected cells change
phenylephrine, an agonist for -adrenergic receptors, from a spread form to a rounded form (Fig. 4B) with the
and lysophosphatidic acid reduced the phosphodiester- disappearance of actin filaments.9) Immunofluorescence
ase activity by 30 and 40% respectively. Although these staining with GDE3 antibody in MC3T3-E1 cells
interesting observations by Zheng et al.10) strongly suggested that endogenous GDE3 is co-localized with
suggest that the GroPIns phosphodiesterase activity of the actin cytoskeleton. To determine the physiological
GDE1 is regulated by G protein signaling pathways, it role of GDE3 in osteoblast differentiation, MC3T3-E1
remains to be determined whether the interaction of cells stably expressing GDE3 were constructed. Stable
GDE1 with RGS protein regulates GroPIns activity. expression of GDE3 was found to lead to dramatic
Very recently, Bachmann et al. proposed a molecular increases in alkaline phosphatase activity and calcium
3D model of the catalytic region of human GDE1 by deposits. In this study, we prepared anti-GDE3 antibody
comparing the amino acid sequences between mamma- specifically recognizing the putative GP-PDE domain in
lian GDE1 and bacterial GP-PDE proteins.18) Based on the extracellular loop using a bacterially synthesized
the structural model, the catalytic region of GDE1 maltose-binding protein-fused fragment corresponding
protein consists of a central -sheet made up of eight to amino acids 219–332 of GDE3. Because FACS
strands, two additional -strands, and 13 -helices. The analysis using purified anti-GDE3 antibody indicated
proposed model suggests that the predicted a/ structure that the putative GP-PDE domain faces an extracellular
resembles a triose-phosphate-isomerase (TIM) barrel space like GDE1, we are interested to know whether this
domain, and that the conserved core amino residues are antibody has a neutralizing effect on the physiological
essential for GDE1 catalytic activity, providing impor- functions of GDE3 during the differentiation of MC3T3-
tant information for an understanding of the molecular E1 cells. The addition of anti-GDE3 antibody to the
function of mammalian GP-PDE proteins. culture medium caused a 72.5% decrease in alkaline
phosphatase activity as compared to that of normal
1814 N. YANAKA
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of neuronal differentiation and outgrowth by RA
B remains limited. In a very recent study, Rao et al.
cloned cDNAs that differentially expressed in ventral
spinal cord explants grown in the presence or absence of
GFP RA by a differential subtractive screen, and identified
GDE2 as a new RA-responsive gene in motor neu-
rons.33) Motor neuron progenitors located in the ven-
tricular zone of the spinal cord highly express oligoden-
drocyte transcription factor 2 (Olig2). These progenitor
cells exit the cell-cycle, migrate laterally, and begin to
GDE3-GFP express motor neuron-specific transcription factors,
including homeobox factor 9 (HB9), islet1, and islet2.
It was found that GDE2 mRNA is highly expressed in
mature motor neurons that are postmitotic and express
HB9, islet1, and islet2 in the chick spinal cord. In ovo
Fig. 4. GDE3 Is Involved in Morphological Changes in Cells and electroporation of GDE2 small interfering RNAs
Promotes Osteoblast Differentiation.
A, GDE3 mRNA increased transiently during differentiation of
(siRNAs) resulted in a 70% loss of HB9-espressing
MC3T3-E1 cells. Total RNA from MC3T3-E1 cells cultured at the neurons and a 30 to 40% loss of more mature motor
indicated days was subjected to Northern blot analysis. Filters were neurons expressing islet2.33) Furthermore, Rao et al.
probed for GDE3, osteopontin, osteocalcin, and type I collagen. B, found that expression of the motor neuron markers HB9
HEK293T cells were transiently transfected with green fluorescence and islet2 is induced in progenitor cells expressing Olig-
protein (GFP) or GFP-fused GDE3 (GDE3-GFP). The expression of
GDE3 induced cell rounding (GDE3-GFP, left panel). Wild-type
2 in response to electroporation of GDE2 cDNA. In
GFP was distributed evenly over the entire cytoplasm in HEK293T contrast, conversion of a conserved histidine residue to
cells (GFP, right panel), whereas GDE3 protein was concentrated at alanine in the GP-PDE region of GDE2 abolished the
the cell periphery (GDE3-GFP, right panel). ability of GDE2 to promote motor neuron differentia-
tion.33) These interesting observations by Rao et al.
strongly suggest that GDE2 is primarily expressed in
rabbit IgG.9) Taken together with these observations, it mature neurons and that it plays important roles in motor
is probable that GDE3 accelerates the program of neuron differentiation through GP-PDE activity.
osteoblast differentiation of MC3T3-E1 cells. As described above, RA is known to induce neurite
outgrowth of human and mouse neuroblastoma cells.
III. Virtual Cloning of GDE2 and It’s Ever since we showed that GDE3 protein is localized at
Physiological Roles in Neuronal Differentia- the cell periphery and plays a critical role in morpho-
tion logical changes in cells, as described above, we have
been particularly interested in the physiological func-
The precise wiring of neural circuits and connections tions of mammalian GP-PDEs during neuronal out-
formed between neurons depends on the ability of growth/retraction. In order to isolate GP-PDEs that are
developing neurons to extend axons and dendrites to highly expressed in neuronal tissues, a search of EST
their targets.23,24) Neurite outgrowth is regulated by a databases was performed using their putative catalytic
variety of signaling mechanisms, including growth domains. We found that GDE2 mRNA was highly
factors and soluble or membrane-bound guidance cues, expressed in a variety of brain regions,34) including the
with coordinated regulation of the cytoskeleton within cerebral cortex, cerebellum, hippocampus, and primary
growth cones, which exhibit highly motile actin-based cortical neurons. Because these observations including
structures.25) Recent studies have indicated that the Rho novel functions of GDE3 led us to hypothesize that
family of small G-proteins, Rho, Rac, and Cdc42, are GDE2 is involved in neuronal outgrowth, we inves-
key proteins in the regulation of trasnsducing signals tigated the physiological function of GDE2 during
from extracellular cues to the actin cytoskeleton.26,27) On neuronal differentiation by RA in Neuro2A cells, which
the other hand, retinoic acid (RA), an active metabolite are neuroblastoma from the mouse spinal cord and are
Mammalian Glycerophosphodiester Phosphodiesterases 1815
A
Retinoic acid
0 1 3 6 14 26 hrs
GDE2
-actin
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B
Scramble GDE2 RNAi
widely used in studies of neuronal outgrowth. Our first and neuronal cells.37,38) GroPIns and GroPIns-4P have
finding was that expression of GDE2 mRNA in been found to modulate various cellular events, such as
Neuro2A cells was significantly up-regulated during intracellular cyclic AMP production and invasion of the
neuronal differentiation by RA treatment (Fig. 5A).34) extracellular matrix by tumor cells.39,40) Mancini et al.
To identify the role of GDE2 in neuronal differentiation, recently identified remarkable effects of GroPIns-4P in
Neuro2A cells stably expressing the full-length protein the reorganization of the actin cytoskeleton, showing
were constructed. We found that expression of GDE2 that exogenously added GroPIns-4P rapidly and potently
resulted in significant increases in neurite length and induced formation of membrane ruffles and stress fibers
numbers of cells bearing neurites in the absence of RA. in Swiss 3T3 cells.41) We found that endogenous GDE3
Furthermore, we observed that GFP-fused GDE2 accu- protein appears to be co-localized with the actin
mulates in the regions of perinuclear and growth cones cytoskeleton in MC3T3-E1 cells, and that overexpres-
in Neuro2A cells and that a loss of function of GDE2 in sion of GDE3 changed transfected HEK293T cells from
Neuro2A cells by RNAi blocks RA-induced neurite a spread to a rounded form. Taken together with these
formation (Fig. 5B).34) These observations indicate that observations, it is suggested that mammalian GP-PDEs
GDE2 expression during neuronal differentiation plays function in actin cytoskeletal organization as a rate-
an important role in growing neurites. limiting enzyme that is a critical determinant of intra-
cellular GroPIns and GroPIns-4P levels. An obvious
IV. Physiological Functions of GP-PDEs question that arises from these results is where GroPIns
is degraded, because the catalytic domains of mamma-
GDE1 was recently found to hydrolyze GroPIns lian GP-PDEs, except for GDE5, face either the lumen
preferentially.10) Endogenous GroPIns and its phos- of the endoplasmic reticulum or the extracellular space.
phorylated form, GroPIns-4P, are intracellular, water- GroPIns has been found to be present in both intra-
soluble metabolites, and were found to be elevated under cellular and extracellular spaces.37) Exogenously added
experimental conditions of Ras-transformation in a GroPIns is able to cross the plasma membrane to reach
number of cell lines.35,36) In addition, intracellular equilibrium rapidly with the cell cytosol and exert its
accumulation of these compounds has been reported to biological actions intracellularly, implying the existence
be correlated to the differentiation/dedifferentiation of of a GroPIns transporter in mammalian cells. In yeast,
several cell lines, including macrophages, hapatocytes, GroPIns is known to be transported across the plasma
1816 N. YANAKA
membrane by a permease encoded by the GIT1 istic signal sequence at the N terminus or a trans-
gene.42,43) Very recently, Mariggiò et al. have found membrane sequence, as determined by hydropathy
that Glut2 transporter is a human-genome candidate analysis, suggesting that GDE5 functions as a cytosolic
ortholog GIT1, and that it functions as a GroPIns protein. Our observations indicate that expression of
transporter in mammals.44) The existence of a GroPIns GDE5 mRNA is present in mouse skeletal muscle and
transporter in mammalian cells suggests that the intra- cardiac muscle, and is regulated in skeletal muscles of
cellular concentration of GroPIns might be regulated by fasted mice and diabetic KK-Ay mice (unpublished
GP-PDE activity in the extracellular space. data). Because the predicted structural feature of GDE5
On the other hand, we recently found that GDE2 is is an N-terminal carbohydrate binding domain that is
involved in the neuronal outgrowth of Neuro2A cells.34) also found in glucoamylases, GDE5 might bind to
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It has been proposed that an increase in cell membrane glycogen and might be involved in glucose metabolism
surface area is also necessary during neuronal out- and/or utilization in skeletal muscles. Their diversity of
growth.45) A continuous supply of newly synthesized distribution at the cellular and tissue levels, and
membrane components is necessary to sustain growth. probably enzymatic properties, including substrate
Previous reports have demonstrated that arachidonic specificity, indicates that GP-PDEs can regulate cellular
acid-releasing phospholipases (PLA2) are highly en- functions selectively and can play distinct physiological
riched in growth cones, and that exogenously added roles.
PLA2 can promote neurite extension.46,47) Very recently,
Darios et al. reported that arachidonic acid stimulated Acknowledgments
cell membrane expansion by interacting with syntaxin 3,
a plasma membrane protein.48) These observations I am grateful to all my co-workers, and especially to
suggest that soluble fatty acids such as arachidonic acid Dr. Kenji Omori, for continuous advice and encourage-
released from the plasma membrane play an important ment throughout this work. The initial studies on the
role in neuronal cell membrane expansion. GroPIns is a isolation and characterization of GDE3 described here
deacylation product of the membrane phosphatidylino- were performed in the Discovery Research Laboratories
sitol formed by sequential actions of PLA1/PLA2 and at Tanabe Seiyaku Co., Ltd. I am deeply thankful to Dr.
lysophospholipases.37) After GP-PDEs hydrolyze Gro- Norihisa Kato, Dr. Yuji Imai, and Dr. Eri Kawai for
PIns to glycerol phosphate and inositol, these final technical advice and helpful discussion, and also thank
catabolic products are most likely utilized in phospho- the staff, including the graduate and current students
lipid synthesis as a recycling pathway, one that might be (Yosuke, Zaki and Tome) of this laboratory (Department
essential for the constitutive release/supply of soluble of Molecular and Applied Bioscience, Graduate School
fatty acids such as arachidonic acid during neuronal of Biosphere Science, Hiroshima University).
formation.
References
V. Other Mammalian GP-PDEs
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