2022-2023 Learning outcomes By the end of this lecture you will be able to:
•Identify the Structure of DNA
•Discuss the Replication of DNA Background Information What is DNA? DNA, or deoxyribonucleic acid, is the hereditary material in humans and almost all other organisms. Nearly every cell in a person’s body has the same DNA. Most DNA is located in the cell nucleus (where it is called nuclear DNA), but a small amount of DNA can also be found in the mitochondria (where it is called mitochondrial DNA or mtDNA). Mitochondria are structures within cells that convert the energy from food into a form that cells can use. Structure of DNA The information in DNA is stored as a code made up of four chemical bases: adenine (A), guanine (G), cytosine (C), and thymine (T). Human DNA consists of about 3 billion bases, and more than 99 percent of those bases are the same in all people. The order, or sequence, of these bases determines the information available for building and maintaining an organism, similar to the way in which letters of the alphabet appear in a certain order to form words and sentences. DNA is a double helix formed by base pairs attached to a sugar-phosphate backbone. Structure of DNA DNA bases pair up with each other, A with T and C with G, to form units called base pairs. Each base is also attached to a sugar molecule and a phosphate molecule. Together, a base, sugar, and phosphate are called a nucleotide. Nucleotides are arranged in two long strands that form a spiral called a double helix. The structure of the double helix is somewhat like a ladder, with the base pairs forming the ladder’s rungs and the sugar and phosphate molecules forming the vertical sidepieces of the ladder. Replication of DNA An important property of DNA is that it can replicate, or make copies of itself. Each strand of DNA in the double helix can serve as a pattern for duplicating the sequence of bases. This is critical when cells divide because each new cell needs to have an exact copy of the DNA present in the old cell. Replication of DNA DNA replication is the process by which a double-stranded DNA molecule is copied to produce two identical DNA molecules. Replication is an essential process because, whenever a cell divides, the two new daughter cells must contain the same genetic information, or DNA, as the parent cell. The replication process relies on the fact that each strand of DNA can serve as a template for duplication. DNA replication initiates at specific points, called origins, where the DNA double helix is unwound. A short segment of RNA, called a primer, is then synthesized and acts as a starting point for new DNA synthesis. An enzyme called DNA polymerase next begins replicating the DNA by matching bases to the original strand. Once synthesis is complete, the RNA primers are replaced with DNA, and any gaps between newly synthesized DNA segments are sealed together with enzymes. Replication of DNA & Proofreading Replication of DNA & Proofreading DNA replication is a crucial process; therefore, to ensure that mistakes, or mutations, are not introduced, the cell proofreads the newly synthesized DNA. Once the DNA in a cell is replicated, the cell can divide into two cells, each of which has an identical copy of the original DNA. Extract your own DNA Have you ever wanted to see what makes you, you? You can extract your DNA using ingredients in your kitchen! What you need 1. 500ml bottled water 2. 3 x clear plastic cups or glasses 3. Clear washing up liquid 4. 1 tbsp table salt 5. 100 ml isopropyl alcohol 6. Blue food coloring 7. You! Protocol 1. Mix the bottled water with the salt in a cup. Stir until salt is dissolved. 2. Transfer 3 tbsp of the salt water into a separate cup. 3. Gargle the salt water for 1 minute. Don't swallow it! 4. Spit the water back into the cup. 5. Add one drop of washing up liquid to the salt water. Stir gently. Try not to create any bubbles. 6. In a separate cup, mix the isopropyl alcohol and 3 drops food colouring. 7. Gently pour the alcohol and food colouring mixture into the salt water cup. Tilt the salt water cup as you pour, so the alcohol mixture forms a layer on top of the salt water. 8. Wait for 2.5 minutes. You should see white clumps and strings forming. The white clumps and strings are your DNA! What's happening? • When you gargle the salt water and spit it back out, some of your cheek cells become suspended in the salt water. The more vigorously you gargle, the more cheek cells will collect in the salt water. • The washing up liquid breaks down your cheek cell membranes. This causes the DNA to be released into the salt water. What's happening? • DNA is not soluble in alcohol, so it forms a solid where the alcohol and salt water layers meet. Most other substances from your cheek cells stay dissolved in the salt water layer. The white strings and clumps you see are thousands of DNA molecules clumped together. Single DNA molecules are far too small to see with the naked eye. • When you gargle the salt water, you are also collecting some bacterial cells from the inside of your mouth, so the DNA you see is a mixture of your DNA and bacterial DNA!