Cambridge International Examinations: A Level Biology Brief Outline of the Stages of Respiration o Glycolysis: splitting of sugar • What? – The formation of pyruvic acid from glucose • Where? – Cytoplasm of a cell
o The Krebs Cycle
• What? – The removal of hydrogen from pyruvic acid • Where? – Matrix of the mitochondria
o Electron Transport Chain/Oxidative Phosphorylation
• What? – Using hydrogen to produce ATP (adenosine triphosphate) • Where? – Inner mitochondrial membrane Oxidation • Oxidation is: – The addition of oxygen – The removal of hydrogen – Or the loss of electrons • Reduction is: – The addition of hydrogen – The removal of oxygen – Or the gain of electrons o OILRIG • A lot of the reactions in the stages of respiration involve oxidation through the removal of electrons or hydrogen atoms • These are transferred to electron/hydrogen carriers • Lastly they are chemically bonded with oxygen to form water in the very last stage of respiration Glycolysis • Glucose is phosphorylated twice (two phosphate (PO4) groups are added) to make a 6C (carbon) sugar phosphate • 2 ATP’s are used to provide the phosphates • This makes the glucose more reactive • So, the 6C sugar phosphate breaks down into 2 3C sugar phosphates called triose phosphates (TP) • Hydrogen is removed from each of the 2 TP molecules • The hydrogens are passed to 2 NAD (nicotinamine adenine dinucleotide) molecules • 2 ATP’s are made directly from the conversion of each TP to pyruvic acid as the phosphate groups are removed Into and Out of Glycolysis Into Glycolysis Out of Glycolysis • 1 Glucose • 2 pyruvic acids molecule (6C) (3C) • 2 NAD molecules • 2 reduced NAD • 2 ATP molecules molecules (2 NADH + H⁺) • 4 ATP molecules The Link Reaction • The pyruvic acid (PA) molecules enter the mitchondrion • CO₂ and hydrogen are removed from each PA to create two 2C molecules • The hydrogen is transferred to NAD • The 2C molecule is then combined with coenzyme A (CoA) to form the 2C compound: acetylCoA Into and Out of The Link Reaction Into Link Reaction Out of Link Reaction • 2 pyruvic acids • 2 Acetyl CoA • 2 CoA • 2 CO₂ • Glucose • 2 reduced NAD • 2 NAD molecules (2 NADH + H⁺ The Krebs Cycle • Also known as the citric acid cycle or the tricarbolyxic acid cycle • For each glucose molecule there were 2 pyruvic acid molecules formed and 2 acetyl CoA molecules • So the whole cycle takes place twice for every glucose molecule respired 1. Each acetyl CoA (2C) combines with an oxaloacetic acid (4C) to make a 6C compound: citric acid 2. In a series of steps, for each 6C compound: 1. 3 NAD molecules are reduced 2. 1 FAD (flavin adenine dinucleotide) is reduced 3. 1 ATP molecule is made directly 3. The 4C compound is regenerated (by the removal of the 2C’s in 2 CO₂ molecules) so that the cycle can begin again with more molecules of acetyl CoA Into and Out of Krebs Cycle Into Krebs Cycle • 2 acetyl CoA Out of Krebs Cycle • Hydrogen • 2 oxaloacetate molecules • 6 NAD molecules • 4 CO₂ molecules • 2 FAD molecules • 6 reduced NAD • 2 ADP + P (6 NADH + H⁺) • 2 reduced FAD (2 FADH + H⁺) • 2 ATP molecules Molecule Tracking • So far we have in total from 1 glucose molecule: –4 ATP molecules that have been made directly –10 reduced NAD’s –2 reduced FAD’s The Electron Transport Chain/ Oxidative Phosphorylation • Now all the hydrogen from the reduced hydrogen carriers (NAD and FAD) enters a chain of reactions which ultimately yields energy in the form of ATP • Each hydrogen atoms splits into its constituent H⁺ (hydrogen ion) and electron • The electron is the part that actually gets passed down the chain from carrier to carrier • The H⁺ remains in the mitochondrial matrix • The electron carriers are at successively lower energy levels so as the electron moves from one carrier to the next, some energy is released • This energy is used to pump H⁺ from the matrix into the space between the inner and outer mitochondrial membrane • So the H⁺ from the matrix goes into the space between the inner and outer mitochondrial membrane • So the H⁺ concentration there increases forming a concentration gradient • This means that the H⁺ ions have electric potential energy • H⁺ then flows back down the gradient into the matrix through protein channels • Associated with each channel is an enzyme – ATP synthase • As the H⁺ ions flow through, their energy is used to make ATP • This theory about how ATP is actually made is called the chemiosmotic theory • Oxygen acts as the final electron acceptor in the chain • So, the oxygen, electrons and hydrogen ions form water • For every reduced NAD – 3 ATP • For every reduced FAD – 2 ATP Molecule Tracking • Now in total we have made 38 molecules of ATP • However this only happens in the most favourable conditions – in reality slightly less are made