07/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...

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BLAST ® » Global Alignment » results for RID-G8T2BEDX114

Job Title AF028688:Methanobacterium bryantii strain... ...

RID G8T2BEDX114 Search expires on 07-08 20:02 pm
Program Needleman-Wunsch alignment of two sequences
Query ID AF028688.1 (nucleic acid)
Query Descr Methanobacterium bryantii strain RiH2 16S ribosomal RNA gene, complete sequence ...
Query Length 1476
Subject ID NR_028242.1 (nucleic acid)
Subject Descr Methanothrix soehngenii strain Opfikon 16S ribosomal RNA, complete sequence ...
Subject Length 1472

Descriptions

Description Score Percent Ident Accession

Methanothrix soehngenii strain Opfikon 16S ribosomal RNA, complete sequence 1457 80.00% NR_028242.1

Graphic Summary

Distribution of the top 1 Blast Hits on 1 subject sequences

Query

1 250 500 750 1000 1250

Alignments
Alignment view Pairwise CDS feature Restore defaults

Methanothrix soehngenii strain Opfikon 16S ribosomal RNA, complete sequence

Sequence ID: NR_028242.1 Length: 1472 Number of Matches: 1
Range 1: 1 to 1472

NW Score Identities Gaps Strand Frame

1457 1190/1485(80%) 21/1485(1%) Plus/Plus

Query 1 CTTCCGGTTGATCCCGCCGGAGGCCACTGCTTTTGGGGTTCGATTAAGCCATGCAAGTTG 60
||| ||||||||| ||| |||| |||||| | | ||||||| |||||||||| ||| |
Sbjct 1 ATTCTGGTTGATCCTGCCAGAGGTTACTGCTATCGAGGTTCGACTAAGCCATGCGAGTCG 60
Query 61 AACGAATCTTCGGATTCGTGGCGAACGGCTCAGTAACACGTGGATAACCTGCCCTTAGGA 120
|| | | | || | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct 61 AATGTAGCA----ATACATGGCGAACTGCTCAGTAACACGTGGACAACCTGCCCTTAGGT 116
Query 121 CTGGGATAACCCTGGGAAACTGGGGATAATACCGGATATTTAGGAGTTCCTGGAATGGTC 180
|| |||| || ||||||||||| |||||||| |||| | || |||||||| |
Sbjct 117 TGGGTATAAACCCGGGAAACTGGGTATAATACCCGATAGGTCTCGATTGCTGGAATG--C 174
Query 181 TTCTA--TTTAAATGTTCAGGCGCCTAAGGATGGATCTGCGGCAGATTAGGTAGTTGGTG 238
|| | |||||| | || ||||||||||||||| |||||||| || ||||||| | |
Sbjct 175 ATCGAGATTTAAA-GCTCCGGCGCCTAAGGATGGGTCTGCGGCCTATCAGGTAGTAGTGG 233
Query 239 GGGTAATGGCCCACCAAGCCTTTGATCTGTACGGGTTGTGAGAGCAAGAGCCCGGAGATG 298
| ||| | || | ||||| || ||||||||||||||||||||||||||||||||
Sbjct 234 GTGTAGCGTACCTACTAGCCTACGACGGGTACGGGTTGTGAGAGCAAGAGCCCGGAGATG 293
Query 299 GAACCTGAGACAAGGTTCCAGGCCCTACGGGGCGCAGCAGGCGCGAAACCTCCGCAATGC 358
|| |||||||| | |||||||||||||||| ||||||||||||||| || ||||||
Sbjct 294 GATTCTGAGACACGAATCCAGGCCCTACGGGGTGCAGCAGGCGCGAAAACTTTACAATGC 353
Query 359 ACGAAAGTGCGACGGGGGGACCCCAAGTGCCACTCTTAACGGGGTGGCTTTTTTTGAG-T 417
| || |||| ||| ||| | ||||||| ||| ||||| | ||| |
Sbjct 354 TGGCAACAGCGATAAGGGAACCTCGAGTGCCAGG-TTACAAATCTGGCTGTC---GAGAT 409
Query 418 G--TAAAAAGC-TTTGAGAATAAGAGCTGGGCAAGACCGGTGCCACCCGCCGCGGTAACA 474
| |||||||| ||| | | ||| || ||||||||||||||||| ||||||||||||||
https://blast.ncbi.nlm.nih.gov/Blast.cgi 1/3
07/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...
| |||||||| ||| | | ||| || ||||||||||||||||| ||||||||||||||
Sbjct 410 GCCTAAAAAGCATTTCATAGCAAGGGCCGGGCAAGACCGGTGCCAGCCGCCGCGGTAACA 469
Query 475 CCGGCAGCTCAAGTGGTGGCCATTTTTATTGGGCCTAAAGCGTTCGTAGCCGGCTTGATA 534
||||| |||| |||||| || || |||||||| |||||| || ||||||||| ||||
Sbjct 470 CCGGCGGCTCGAGTGGTAACCGTTATTATTGGGTCTAAAGGGTCTGTAGCCGGCCGGATA 529
Query 535 AGTCTCTGGTGAAATCCCATAGCTTAACTGTGGGAATTGCTGGAGATACTATTAGGCTTG 594
||||||| | |||||| ||||||||||| | || | ||||||||| | |||| |
Sbjct 530 AGTCTCTTGAGAAATCTGGCAGCTTAACTGTCAGGCTTTCAGGAGATACTGTCTGGCTCG 589
Query 595 AGGCCGGGAGAGGTTAGGGGTACTCCCAGGGTAGGGGTGAAATCCTATAATCCTGGGAGG 654
|||||||||||||| || |||||| | |||||||||||||||| | ||||||| | |||
Sbjct 590 AGGCCGGGAGAGGTGAGAGGTACTTCAGGGGTAGGGGTGAAATCTTGTAATCCTTGAAGG 649
Query 655 ACCACCTGTGGCGAAGGCGCCTAACTGGAACGGACCTGACGGTGAGTAACGAAAGCCAGG 714
|||||| |||||||||||| || || ||||||||||||||| || |||||||| |||
Sbjct 650 ACCACCAGTGGCGAAGGCGTCTCACCAGAACGGACCTGACGGCAAGGGACGAAAGCTAGG 709
Query 715 GGCGCGAACCGGATTAGATACCCGGGTAGTCCTGGCCGTAAACGATGCGGACTTGGTGTT 774
||| ||||||||||||||||||||||||||||| |||||||||||| | || |||||
Sbjct 710 GGCACGAACCGGATTAGATACCCGGGTAGTCCTAGCCGTAAACGATACTCGCTAGGTGTC 769
Query 775 GGAATGGCTTCGAGCTGCTCCAGTGCCGAAGGGAAGCTGTTAAGTCCGCCGCCTGGGAAG 834
|| | | ||| | | |||||| |||||||| || ||| ||| |||||||||
Sbjct 770 GGCCACGGTGCGACCGTTGTCGGTGCCGTAGGGAAGCCGTGAAGCGAGCCACCTGGGAAG 829
Query 835 TACGGTCGCAAGACTGAAACTTAAAGGAATTGGCGGGGGAGCACCACAACGCGTGGAGCC 894
||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 830 TACGGCCGCAAGGCTGAAACTTAAAGGAATTGGCGGGGGAGCACCACAACGGGTGGAGCT 889
Query 895 TGCGGTTTAATTGGATTCAACGCCGGACATCTCACCAGGGGCGACAGCAGAATGATGGCC 954
||||||||||||||||||||||||||| |||| ||| || |||||||| |||| ||||
Sbjct 890 TGCGGTTTAATTGGATTCAACGCCGGAAATCTTACCGGGACCGACAGCAATATGAAGGCC 949
Query 955 AGGTTGACGACCTTGCTTGACAAGCTGAGAGGAGGTGCATGGCCGCCGTCAGCTCGTACC 1014
||| ||| ||| |||| || |||||||||| |||||||||||| |||||| ||||||
Sbjct 950 AGGCTGAAGACTTTGCCGGATTAGCTGAGAGGTGGTGCATGGCCGTCGTCAGTTCGTACT 1009
Query 1015 GTGAGGCGTCCTGTTAAGTCAGGCAACGAGCGAGACCCACGCCCTTAGTTACCAGCGGAT 1074
|||| || |||||||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 1010 GTGAAGCATCCTGTTAAGTCAGGCAACGAGCGAGACCCACGCCCACAGTTGCCAGCGTAC 1069
Query 1075 CCTCCGGGATGCCGGGCACACTAAGGGGACCGCCAGTGATAAACTGGAGGAAGGAGTGGA 1134
||| || || |||| ||||| |||||||||| || |||| |||||||||| |||
Sbjct 1070 TCTCTGGAGTGACGGGTACACTGTGGGGACCGCCGCTGCTAAAGCGGAGGAAGGAATGGG 1129
Query 1135 CGACGGTAGGTCCGTATGCCCCGAATCCCCTGGGCTACACGCGGGCTACAATGGCTATGA 1194
| |||||||||| ||||||||||||| || |||||||||||| |||||||||| | |
Sbjct 1130 CAACGGTAGGTCAGTATGCCCCGAATATCCCGGGCTACACGCGAGCTACAATGGTTGGTA 1189
Query 1195 CAATGGGTTCCGACACTGAAAGGTGAAGGTAATCTCCTAAACATAGTCTTAGTTCGGATC 1254
|||||||| | || | |||||| || || ||||||||||| | |||||||||||||
Sbjct 1190 CAATGGGTATCTACCCCGAAAGGGGACGGGAATCTCCTAAAACCAATCTTAGTTCGGATT 1249
Query 1255 GAGGGCTGTAACCTGCCCTCGTGAAGCTGGAATGCGTAGTAATCGCGTGTCATAATCGCG 1314
|||||||| ||| |||||| |||||||||||| |||||||||||||| ||| | ||
Sbjct 1250 GAGGGCTGCAACTCGCCCTCATGAAGCTGGAATCCGTAGTAATCGCGTTTCAACAGAACG 1309
Query 1315 CGGTGAATACGTCCCTGCTCCTTGCACACACCGCCCGTCACGCCACCCAAAAAGGGTTTG 1374
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||
Sbjct 1310 CGGTGAATACGTCCCTGCTCCTTGCACACACCGCCCGTCAAACCACCCGAGTAGGGTCTG 1369
Query 1375 GATGAGGCCTCAGTCTTTGGTTGGGGTCGAATCTGGGTTCTTTG--AGGAGGGCGAAGTC 1432
||||| | | ||||||| | | |||||| |||| ||||| ||| ||| |||||
Sbjct 1370 AATGAGAGCGCTTTCTTTGGAGGCGTTCGAATTTGGG--CTTTGCAAGGGGGGTTAAGTC 1427
Query 1433 GTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCT 1476
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1428 GTAACAAGGTAGCCGTAGGGGAATCTGCGGCTGGATCACCTCCTA 1472

Taxonomy

Reports
Lineage

Organism Blast Name Score Number of Hits Description

Methanothrix soehngenii euryarchaeotes -1.0 1 Methanothrix soehngenii hits

Organism

Description Score E value Accession

Methanothrix soehngenii [euryarchaeotes ]

https://blast.ncbi.nlm.nih.gov/Blast.cgi 2/3
07/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...

Description Score E value Accession

Methanothrix soehngenii strain Opfikon 16S ribosomal RNA, complete sequence -1.0 0.0 NR_028242

Taxonomy

Taxonomy Number of hits Number of Organisms Description

Methanothrix soehngenii 1 1 Methanothrix soehngenii hits

Dot Plot

Plot of AF028688.1 vs NR_028242.1

https://blast.ncbi.nlm.nih.gov/Blast.cgi 3/3