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Paper Pathophysiology Sars-Cov-2: Pathophysiology of Covid-19 and Immune System (
Paper Pathophysiology Sars-Cov-2: Pathophysiology of Covid-19 and Immune System (
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Introduction
a. Anatomy
In human, lungs is located in thoracic cavity, more precisely
located in front of heart (anterior to heart). The shape of lungs is a pair
of big ballon-like sacs which have same shape (like mirror), but the left
side much smaller than the right side it is because the existence of heart
that located a little to the left. If we view from anterior (from the front),
the shape of lungs is like flat and smooth air sac with apex at the upper
side and some hint of line called fissure, the bottom side of left side
lungs is much smaller than right side. And if we view from posterior
(from the back) the shape is much like bowl, and there is hilum in the
back side of lungs. The hilum is wedge-shaped area located in central of
each lungs, the area region is where the bronchi, arteries, veins and
nerves enter and exit the lungs. Actually, there is segments in lungs
called lobes and again in the lobes there are smaller segments. The
segment in lungs is indicated by fissure. The right side of lungs is
divided into three lobes such as superior lobe (upper side), middle lobe
and inferior lobe (lower side). While in the left side of the lungs there
are only two lobes such as superior lobe (upper side) and inferior lobe
(lower side). With a help of trachea, lungs can connect to nose so that
enables lungs to do its job. Trachea or windpipe is kind of tube-like
shape that connects lungs to larynx so it can help the job of lungs to
catches air. The bottom side of trachea there is a branch called bronchi
and there is two of them. Bronchi, the branch get into the lungs via
hilum. Actually, there are also smaller branches of bronchi inside of
lungs called bronchiolus and at the end of bronchiolus, there are lot of
tiny air sacs called alveoli. The function of alveoli is for place for
exchange of carbon dioxide and oxigen in bloodstream.
b. Physiology
Basically, all of living things except plants need to breath because
they needed oxigen to stay alive. But, because oxigen is exist in
environtment, i mean in air not in body of humans nor animals but their
suroundings. It means they need ability that enables them to catch
oxigen in air. Thats why lungs existed, with the helps of lungs and other
organ that can helps lungs, so we can breathes and stay alive.
a. SARS-CoV-2
SARS-CoV-2 is one of the virus that has same category as SARS-
CoV and MERS viruses namely Coronavirus (corona : crown) because
the structure of SARS-CoV-2’s Spikes that look alike to crown. This
coronavirus was first discovered and spread in one of city in China,
namely Wuhan since Desember 2019. Since the virus spreading in
Wuhan, there is a lot of pneunomia cases that occues in wuhan however
the initial cause remains unknown. hence, the Chinese government and
researchers did various things quickly to conduct ethiological research
and to get control of endemic so the spreading of virus is restrained. In
2020 the virus breakout and spread out over countries and at february
11th 2020 WHO officially named this virus, novel Coronavirus (n-CoV)
and later this virus named SARS-CoV-2. Coronavirus SARS-CoV-2 is
mostly the same to SARS-CoV and MERS virus. In fact, the SARS-
CoV-2 belong to β-coronavirus class, which is the same class with
SARS-CoV and MERS virus. In the early days of COVID-19⸻
which is the disease that happens because the infection of SARS-CoV-2
⸻ this virus related to the seafood market in wuhan, because the
virus first spread in this seafood market. Hence, the suspectibility of
spreading method yet to be found. In the time, WHO has been claimed
a report that SARS-CoV-2 can be detected from sample that taken from
environment which has been collected from seafood market. However,
the researcher not yet found animal carrier of this virus at that time. the
research done by ji et al shows that the SARS-CoV-19 is chimeric virus
⸻it means the SARS-CoV-2 actually is derived virus from two or
more gene, genes will combined then SARS-CoV-2 will be created
⸻between bat coronavirus and unknown-origin coronavirus. A
research done by benvenuto et al shows that the coronavirus which
isolated from china chrysantheum-head bat in 2015 is the only
coronavirus that closely related to SARS-CoV-2. These two researches
supports the theory origin transmission of SARS-CoV-2 is from bat to
human. In the recently researches done by Zhou et al and Wu et al
found that SARS-CoV-2 and SARS-CoV was 79,6% same in the
sequence homolog, and higher sequence homolog between SARS-CoV-
2 and bat coronavirus. This research strongly supports the SAS-CoV-2
was derived from bats.
b. Structure of SARS-CoV-2
Coronavirus virions are spherical with a diameter of approximately
125 nm as revealed by cryo-electron tomography and cryo-electron
microscopy. The corona viral genome encodes four main structural
proteins namely the surface spike (S) glycoprotein, the membrane (M)
protein, the small envelope (E) glycoprotein, and the nucleocapsid (N)
protein. All these proteins are required to provide the structure of
complete viral particles called virion. The spike protein is ∼180KD
glycoprotein which is present on the surface of the virus. It is crucial for
the entry of coronavirus into the host cell. It contains two subunits
namely S1 and S2. The S1 subunit binds to the receptor on the surface
of the host cell whereas S2 subunit mediates the cell membrane fusion.
c. Spreading of SARS-CoV-2
a) Media of spreading
Coronavirus SARS-CoV-2 is a type of virus that very easy
to spread between people. This happens because this virus uses
media of air to spread via droplets from infected people when
they sneezing, coughing and even talk. There are three methods
of transmission of this coronavirus. The first is from droplets,
droplets is a tiny particle that spread out when people sneeze,
cough or talk and this tiny particle of droplets can infects people
to get COVID-19. Infections occur mainly through exposure to
respiratory droplets when a person is in close contact with
someone who has COVID-19. The second method transsmission
is airbone transmission. This virus is unique because when it
spread with a media of droplets, this virus can stay live in air for
like 3 hours and because of this ability it can use air for spread
and infecting people. The third method transmission is called
surface transmission. This virus ability for stay live even if they
are in surface is amazing, they can live for 4 days at surface of
woods and 5 days at surface of metals. And someone can be
infected if they touches the surface that infected people sneeze
at and after that touches his mouth, nose or eyes. This three
transmission makes this virus easy to spread. Imagine this,
people can get infected if they near infected people from
droplets or even if someone is far enough from infected people
they cant be guaranteed safe because of airbone transsmision
and surface transmission.
e. Patophysiological of Covid-19
These all begun when SARS-CoV-2 went into peopel respiratory
tract. Then the SARS-CoV-2 will search its receptor which is ACE2
enzyme that located in epithelial cell of the lungs. With a help of its
mace-like S-Spike SARS-CoV-2 binds to ACE2 receptor and went into
epithelial cell of lungs. When SARS-CoV-2 inserts into the body, it
injects its genetic code to the cell, which is ssRNA of virus. This
ssRNA will hijacked the ribosom in the cell to producing a ssRNA copy
and SARS-CoV-2 structure, including spikes, membrane, nucleocapsid,
envelope of the virus. This process called incubation states which
means in this process the virus has not infecting the body, but instead
makes a lot of copy, incubation will takes 4-14 days or even more to
clear based on immune system of the body. When incubation periods
complete, this virus will enter the infection proecess. In the early days
of infection, this virus will infects the endothelial cells in lungs. This
infection will produce mild symptomps like a flu symptomps include
sore throat, cough and maybe fever due to immune system response. In
the second week the infection in alveoli of lungs will be in moderate
level and due to immune responses, the symptoms will be more severe,
in this week milder pneunomia symptoms has appeared. In the next
week, the disease becomes more severe in the point where the
symptoms that the virus caused is in severe condition. From this stage
all the symptoms of the disease, such as pneunomia is in severe
conditions, in fact around 20% of Covid-19 patients has ARDS
symptoms in this week. When this virus infects and attacks the alveoli,
the immune systems at that site will trigger and release Cytokines,
which is such as Interleukin and Interferon⸺ interleukin is one of the
kinds of cytokines the messanger, this type is responsible for the
immune response, such as inflammation which will be the cause of
pneunomia in later steps.
C. Immune system
Immune cells are cells that are responsible for defending the body against
foreign objects, in this case the SARS-CoV-2 corona virus. These cells are very
many types and have different functions including the epithelial / endothelial
immune system as the first line of defense, cytokines as mediators,
macrophages (leukocytes) as phagocytic cells, while T cells and B cells
(lymphocytes) are the last defense as well as the main weapon. to fight the
virus.
D. Prevention
People who is not get infection from SARS-CoV-2 can prevent themselves
by take care of themselves. This is how to prevent yourself from the infection
of
a) Wear a mask
Sometimes the simplest way is the best way to solve something.
The SARS-CoV-2 is spreading via the droplet, airbone transmission,
and surface transmisssion, but mostly the infections comes from
droplets. When people wear a mask it actually decrease the risk to get
infection of this virus so be sure wear a mask if you go somewhere.
b) Stay at home
Stay at home is the good prevention to get infection of this virus,
and it does decrease the risk and infection rate of SARS-CoV-2 virus..
c) Don’t go to the crowd
The risk to get infection significantly increase in the crowd,
because we can’t be so sure if people in crowd is completely healthy.
So don’t go to the crowd and make sure to keep distance so the risk to
get infection is low.
Anonim. Goblet Cells: Definition, Functions, Mucus Secretion & Associated Diseases
https://www.bioexplorer.net/goblet-cells.html/
Anonim. Interleukin
https://www.britannica.com/science/interleukin
Anonim. Lungs.
https://www.therespiratorysystem.com/lungs/
Anonim. Meet ACE2, the Enzyme at the Center of the Covid-19 Mystery
https://www.wired.com/story/meet-ace2-the-enzyme-at-the-center-of-the-covid-19-mystery/
Anonim. T-Cells
https://www.britannica.com/science/T-cell
Anonim. Pneunomia.
https://www.webmd.com/lung/understanding-pneumonia-basics
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