Professional Documents
Culture Documents
13
The Bioherbicide Approach to Weed
Control Using Plant Pathogens
Karen L. Bailey
Saskatoon Research Centre, Saskatchewan, Canada
approximate order in which they are trouble- high efficacy and low cost. The rapid adop-
some to the world’s agriculturalists’ and the tion of herbicides such as 2,4-D (2,4-dichloro
weeds that are ‘troublesome for man in culti- phenoxy acetic acid) and glyphosate have
vated crops, pastures, and waterways’ (Table dominated all other control practices used on
13.1). It has been estimated that 227 weed spe- 80–100% of all major crops (Bhowmik, 1999).
cies are responsible for 90% of crop losses in In western Canada, 2,4-D was applied to only
world agriculture (Riches, 2001). The loss in 40 ha in 1946 and by 1962, this exceeded 10 mil-
attainable production of rice, wheat, barley, lion ha (Holm and Johnson, 2009). On a global
maize, potatoes, soybeans, cotton and coffee scale, 44% of all pesticides sold are herbicides,
due to weeds is about $76.3 billion worldwide but in countries such as Canada and the USA,
(Bhowmik, 1999). Not all weeds are equally agriculture is the primary herbicide market
distributed throughout the world as some are accounting for 80% of all pesticides sold (Bailey
more regional in nature, whereas others are and Mupondwa, 2006; Bailey et al., 2009; Fishel,
more associated with specific crops. For exam- 2007). The economic impact of not having 2,4-D
ple, yield losses in cotton, rice, and maize are to use in the USA is estimated to be $1.6 billion
estimated to be 18–20% in developing coun- resulting from 37% higher weed control costs,
tries, whereas the losses are only 9–10% in the 36% from decreased yield, and 27% higher
industrialized nations (Terry, 1996). Left uncon- commodity prices (Bhowmik, 1999).
trolled, natural infestations of Russian thistle Aside from the economic issues, there are
(Salsola iberica Sennen & Pau) reduced spring also environmental issues to consider with
wheat yield up to 50% (Young, 1988). Soybean the use of herbicides. The use of herbicides
yields were reduced by 60% from season-long, with conservation tillage or no-till systems has
high density infestations of common ragweed greatly reduced soil erosion and surface run-
(Ambrosia artemisiifolia L.) and smartweed off in soils around the world, providing an
(Polygonum pensylvanicum L.) (Coble and Ritter, important environmental benefit (Anderson
1978; Coble et al., 1981). A season-long density and Lafond, 2010). Yet herbicide use may be
of two weeds per 30 cm of corn row reduced environmentally detrimental when it results
yield by 10% from giant foxtail, 11% from lamb- in the build-up of herbicide-resistant weed
squarters (Chenopodium album L.), and 22% from populations which may occur from overuse of
common cocklebur (Xanthium strumarium L.) a specific herbicide and poor cropping system
(Beckett et al., 1988). Weeds are clearly pests diversity (Beckie, 2009; Heap, 1997). Some her-
that threaten our global food supply if left bicides are persistent in soil, such as the pho-
unchecked and require some management to tosynthetic inhibitors of Group 5 and amino
preserve adequate yield and quality for a con- acid inhibitors of Group 2 (Holm and Johnson,
sistent food supply. 2009). Additionally, poor application technique
may result in drift contaminating watersheds
and other non-target areas (Wolf, 2009).
13.2 CHANGING SOCIETAL A third consideration with regard to her-
VIEWS TO CONVENTIONAL WEED bicide use involves the urban–rural interface
CONTROL PRACTICES where municipal boundaries encroach upon
the domain of agriculture, making the general
Aside from cultivation and crop rotation as public more aware of the practices being used
practices used to control weeds, the use of syn- and raising concerns about soil-water quality
thetic herbicides became very common over and residues in the food (Bailey et al., 2010).
the past 60 years due to the ease of application, As a result, the demand for pesticide-free
(Continued)
Host specificity May be highly host specific or very broad Weeds are unlike other pests as there are usually
spectrum, depending on the weed and multiple weed species within an area that need
circumstances; but effects on non-targets control; the removal of one species provides an
and how the bioherbicide could contact opportunity for another weed to immediately
non-targets must be understood replace it
Crop tolerance No effect on crops or other plants Part of non-target assessment and specific use
growing in the area of application patterns; helps to restrict how the bioherbicide
may be used and reduce risk to non-targets
Efficacy Control is greater than 80% weed Efficacy may be determined by mortality,
reduction and suppression shows biomass, seedling germination, root and shoot
60–80% weed reduction growth, physical symptoms
Environmental fate Low dispersion, persistence limited These traits impose a natural biological
to the growing season only with no containment system reducing the risk of spread,
carry over between seasons, and altering the background soil biota, and limiting
limited reproduction and survival genetic-based changes
Temperature and Should mimic the optimal Mesophyllic microbes should not have growth
moisture spectrum conditions for weed growth beyond 37°C to ensure non-infectious to
humans and other mammals
Toxicology Low toxicity, low re-entry time, Required by regulatory authorities; specific
no-harvest interval tests to assess infectivity, pathogenicity, and
toxic or mutagenic effects; usually conducted by
approved independent 3rd party contractors to
prevent bias
clear and predictable procedures for assess- the sales force and consumers as well as moni-
ing the risk and value; mechanisms for public toring sales and product acceptance. Few bio-
and industry input; establishing timelines for herbicides make it to this point as it is a long,
the process and holding to them; reasonable expensive and challenging process. The next
fees; and enforcement of the legislation and section will highlight those bioherbicides that
regulations for product use, sale, and distribu- made it successfully through registration and
tion. International harmonization to streamline describe where they are used today.
product registration would be the ideal situa-
tion but in reality, may be impossible to attain
worldwide. However, some harmonization 13.5 BIOHERBICIDES REGISTERED
has occurred among countries such as Canada WORLDWIDE
and the USA through the implementation of
a joint review process leading to registration Although the total number of biopesticides
in both countries at the same time (Bailey and registered worldwide is increasing, bioherbi-
Mupondwa, 2006). The key data requirements cides constitute the smallest fraction of these
agreed to for joint reviews include informa- pest control products (Ash, 2010; Bailey et al.,
tion on the origin of the product, derivation 2010; Glare et al., 2012). In 2001, Charudattan
and identification, biological properties, manu- reported that there were eight successfully reg-
facturing methods and quality assurance pro- istered or commercially available bioherbicides
grammes, estimate of potency and product in the world (Charudattan, 2001). About 10
guarantee, unintentional ingredients, storage years later, Kabaluk et al. (2010) reported on the
stability, human health and safety, environmen- current worldwide registrations of microbial
tal fate and toxicology, efficacy (reviewed in biopesticides and, surprisingly, the only coun-
Canada only), crop tolerance, and value (Bailey, tries reporting bioherbicides were the Ukraine
2010). Expedited timelines are given priority for (one bioherbicide), Canada (three bioherbi-
joint review and the process takes about 2 years cides), and the USA (four bioherbicides). These
if all of the required data are supplied at sub- numbers reflect that bioherbicides comprised
mission. Registrants are strongly recommended less than 10% of all biopesticides (i.e. biofungi-
to use the pre-submission regulatory consulta- cide, biobactericides, bioinsecticides, and bione-
tion as the outcome of this session will produce maticides) in those countries. Since that report,
a list of data requirements tailored for the spe- three additional bioherbicides have been regis-
cific bioherbicide being put forward. tered in Canada and the USA, but two others
The home stretch is nearing with the onset had their registrations lapse and are no longer
of pre-commercial development, the stage to available (Table 13.3). The following section
ensure the commercial manufacturing pro- will expand on the historical and current status
cess and downstream processing will deliver of the North American bioherbicides presented
a product that works as expected (Bailey and in Table 13.3.
Falk, 2011). Other activities include accumulat-
ing enough product from the commercial pro-
13.5.1 DeVine®, USA 1981
cess to ensure market demands may be met
in the region of release, completing package Phytophthora palmivora Butler strain MVW
design, organizing the supply chain and deliv- was first registered as DeVine in 1981 by
ery dates, and educating the retailers on how Abbott Laboratories, IL as a bioherbicide to be
to display the new product. Once the product applied to citrus crops to control strangler vine
is launched, there is follow-up education for (Morrenia odorata (Hook. & Arn.) Lindl.). This
Albobacteryn/ Achromobacter Many Sprouting Ukraine Unknown Unknown Kabaluk et al., 2010
Unknown album inhibition
ingredients/index.htm
Collego™/ Colletotrichum Aeschynomene Rice and USA 1982 Registered; Environmental Protection
Encore gloeosporioides virginica soybean 2006 commercially Agency www.epa.gov/
Technologies f. sp. Northern available opp00001/biopesticides/
Lockdown™/ aeschynomene jointvetch ingredients/index.htm
Natural
Industries
BioMal/ Colletotrichum Malva pusilla Various Canada 1992 Registration Boyetchko et al., 2007
Philom Bios gloeosporioides Round-leaved crops lapsed 2006;
(Novozymes) f. sp. malva mallow not available
Camperico™/ Xanthomonas Poa annua Turfgrass Japan 1997 Unknown Bellgard, 2008
Japan Tobacco campestris Annual
bluegrass
Woad Puccina Isatis tinctoria Rangeland; USA 2002 Registered; Environmental Protection
Warrior™/ thlaspeos Dyer’s woad rights of way not available Agency www.epa.gov/
Greenville opp00001/biopesticides/
Farms ingredients/index.htm
Mycotech Chondrostereum Alders, aspen, Forests; Canada 2002 Registration Pest Management
Paste™/ purpureum hardwoods rights of way lapsed 2008; Regulatory Agency, Label
Mycoforestis not available Search www.hc-sc.gc.ca/
Corp cps-spc/pest/index-eng.
php
(Continued)
13.3 Status of Bioherbicides Registered around the World in 2012
TABLE 13.3 (Continued)
Registered Year
Name/Company Microbial Target Non-target Registered & Current
Name Agent Weed Crop Country Reviewed Status Reference
Chontrol Chondrostereum Alders, aspen, Forests; Canada; 2004 Registered; Bailey, 2010; Hintz, 2007
Paste™/ purpureum hardwoods rights of way USA commercially
MycoLogic Inc available
Smoulder/ Alternaria Cuscuta spp. Agriculture; USA 2005 Registered; Environmental Protection
Loveland destruens Dodder horticulture (MA & WI) not available Agency www.epa.gov/
Products Inc opp00001/biopesticides/
ingredients/index.htm
Sarritor™/ Sclerotinia Broadleaved Turfgrass Canada 2007 Registered; Kabaluk et al., 2010;
Sarritor Inc minor weeds conditional; commercially Watson and Bailey,
INTEGRATED PEST MANAGEMENT
Organo-Sol Lactobacillus spp. Broadleaved Turfgrass Canada 2010 Registered; Kabaluk et al, 2010; Pest
Lactococcus spp. weeds commercially Management Regulatory
available Agency Publication
RD2010-10
www.hc-sc.gc.ca/cps-
spc/pubs/pest/index-
eng.php
Product name Phoma Broadleaved Turfgrass Canada 2011 Registered; Bailey and Falk, 2011; Pest
not specified/ macrostoma weeds USA conditional; not yet Management Regulatory
The Scotts 2012 full available Agency, Label Search
Company registration www.hc-sc.gc.ca/cps-
spc/pest/index-eng.php
MBI-005 EP/ Streptomyces Broadleaved Turfgrass USA 2012 Registered; Marrone Bio Innovations
Marrone Bio spp. weeds not yet Inc (Press release 17 May
Innovations available 2012; Contact rblair@
marronebio.com)
13.5 Bioherbicides Registered Worldwide 257
product was the outcome of a collaboration whereby the spores are harvested and dried
that started in 1977 between the company and as a wettable powder. Upon application, the
the Florida Department of Agriculture. DeVine dried spores are mixed with a rehydrating
is produced by submerged liquid fermenta- agent and then water. The product is applied
tion and the liquid product is mixed with water by air and ground spray equipment. Initially,
and sprayed every other season onto soil under it was easy to obtain large numbers of spores,
citrus crops after the weed has germinated but these spores did not dry well and had a
or while actively growing (EPA, 2006a). The short shelf life, so considerable research effort
area of use is restricted to five Florida counties was required to develop a commercially viable
where the active ingredient occurs naturally. product (Bowers, 1986). It now has a shelf life
DeVine was the first bioherbicide developed of 1 year at room temperature or 3 years under
in the USA and had several features that were refrigeration. Over the years, Collego has been
difficult for industry to manage. Kenney (1986) a low-use, highly specific niche market prod-
discussed these features, such as the time it uct, but it has been profitable due to its low
took to learn how to produce chlamydospores, production and marketing costs and the fact
only achieving a 6 week shelf life, and too that there have been few synthetic alternatives
much efficacy with weed control lasting as long (Templeton et al., 1989). By 1997, EPA re-evalu-
as 5 years. In 2006, DeVine was still being pro- ated C. gloeosporioides f.sp. aeschynomene strain
duced occasionally, but after being registered ATCC 20358 under the more recent standards
for such a long time, the EPA required reassess- of the day and deemed it was eligible for rereg-
ment and reregistration, which was granted to istration (EPA, 1997). In 2006, EPA released the
Valent BioSciences Corporation, IL. There is no Biopesticide Registration Action Document
evidence on the company website that DeVine indicating that the registrant, Agricultural
is commercially available unless they continue Research Initiatives, Fayetteville, AR, could sell
to provide it as a goodwill service to the citrus the bioherbicide as LockDown (EPA, 2006b).
growers in those five Florida counties. LockDown has been produced annually since
2008 at a small contract fermentation facility
13.5.2 Collego™/LockDown®, USA and sold directly to growers (Kelly Cartwright,
Agricultural Research Initiatives, personal
1982/2006
communication).
Colletotrichum gloeosporioides f.sp. aeschyno
mene strain ATCC 20358 was first registered as
13.5.3 BioMal®, Canada 1992
Collego in 1982 by Upjohn Company, MI as a
bioherbicide to control northern joint vetch in Colletotrichum gloeosporioides f. sp. malvae
rice (Bowers, 1986; EPA, 1997). That was the strain ATCC 20767 was registered as the bio-
outcome of 12 years of collaboration between herbicide BioMal in 1992 by Philom Bios Inc.
the company and University of Arkansas (Drs to control round-leaved mallow in field crops
George Templeton and David TeBeest) as well (Boyetchko et al., 2007). The fungus was discov-
as other researchers from the USDA. The path- ered in 1982, by researchers with Agriculture
ogen causes lesions on northern joint vetch and Agri-Food Canada, who determined that it
that encircle the stem and result in wilt. Even was a good candidate as a bioherbicide because
though the weeds do not die, the stem lesions the pathogen was host specific to plants in the
and wilt render the weed non-competitive family Malvaceae, the fungus was easily grown
with the crop. To produce Collego, the fungus on artificial medium, and foliar spray applica-
is grown in submerged liquid fermentation tions provided effective weed control by causing
severe stem lesions that girdled the stem and stored at −35°C, Camperico had 1.5 years of
wilted the plant under field conditions. By 1985, stable shelf life and a refrigerated delivery ser-
an agreement was made with Philom Bios, Inc. vice was designed to ship the product while
to collaboratively commercialize the technology frozen (at −18°C) to customers. The product
and the data submission package was made to was registered in Japan in 1997, but there is no
PMRA in 1987. The product was available from public information on its success or decline.
1992 to 1994, when production and sales were The company website does not currently list
halted due to commercialization costs and pro- Camperico as a product for sale.
duction expenses. These expenses were due
to changing market conditions, primarily the
introduction of three new synthetic herbicides
13.5.5 Woad Warrior®, USA 2002
that were cheaper. Agriculture and Agri-Food Woad Warrior is made from the teliospores
Canada researchers sought another industry of the fungus Puccinia thlaspeos C. Shub. ‘strain
partner, Encore Technologies, Minnetonka, MN, woad’ which are applied either as a spray or a
to pursue reregistration as Mallet WP, but dif- powder to control dyer’s woad (Isatis tinctoria
ficulties in manufacturing a consistent prod- L.) (EPA, 2002). This weed is an invasive spe-
uct were encountered and commercialization cies of dry open areas such as those found on
ended. In 2006, PMRA re-evaluated BioMal, farms, rangeland, waste areas and roadsides.
deeming it to be safe under the current stand- It was introduced to the USA from Europe by
ards of the day, but with no industry partner the American colonists, who used it to extract a
registration lapsed. valuable blue pigment, but the weed spread
rapidly in eight semi-arid western states where
it remains a problem today. The rust strain
13.5.4 Camperico®, Japan 1997
was discovered in 1979 in southern Idaho and
Xanthomonas campestris pv. poae is a bac- is highly specific to dyer’s woad. The fungus
terium isolated from annual bluegrass (Poa is an obligate pathogen meaning that it can
annua L.) in Japan (Imaizumi et al., 1997). The only survive and reproduce on this specific
bacterium enters the host through wounds weed host. The teliospores are applied once
and migrates to the xylem, which becomes in the spring (April–May) to first year growth
blocked by bacterial exudates resulting in wilt- of the weed and the resulting infection inter-
ing of the host plant. Eighty-nine isolates were feres with flower and seed formation the fol-
evaluated before selecting strain JTP482, which lowing year. The fungus is non-toxic and not
was developed commercially as Camperico by infective to mammals, and does not show any
Japan Tobacco Inc., Yokohama (Fujimori, 1999). adverse effects to birds, fish, insects and non-
Since the company did both the discovery and target plants. The host specificity and ease of
development work, time was of the essence. application made it very well suited for con-
The researchers spent from 1991 to 1993 col- trolling dyer’s woad. Dr Sherman Thomson at
lecting diseased annual bluegrass plants from Utah State University developed Woad Warrior,
roadsides and turf areas. It then took 3 years which was registered in the USA in 2002 to
to complete the research and achieve commer- Greenville Farms, N. Logan, UT. The drawback
cialization. Although the company wanted to to this bioherbicide was the method of mass
develop a freeze-dried commercial product, production. Being an obligate pathogen, telio-
they were unable to make it stable in the time spores had to be harvested from infected plants,
frame allocated, so a frozen suspension of which is highly labour intensive. Although Dr
cells in fermentation medium was used. When Thomson produced the teliospores on his farm,
phytotoxins called macrocidins are produced such as birds, fish, and bees. It may be used
which have been shown to cause growth inhibi- commercially in agriculture, nurseries, golf
tion, photobleaching, and mortality (Graupner courses, as well as in residential turfgrass. The
et al., 2003). P. macrostoma strain 94-44B was advantages of MBI-005 are that it has broad
shown to be not toxic and not infective to mam- spectrum activity as a pre-emergent, killing
mals, birds, fish, insects, and wild animals. the weeds as they germinate, as well as selec-
In the soil, it provided weed control for up to tive activity with post-emergent applications
4 months, but after 12 months there was no resid- in turf and crops. MBI-005, also branded as
ual activity and it did not move away from the Opportune®, was discovered and developed
site of placement (Zhou et al., 2004). This prod- by Marrone Bio Innovations Inc., who received
uct demonstrated high and consistent efficacy notice of registration approval in April 2012,
under a broad range of environmental condi- and are preparing to release a commercial prod-
tions, a long shelf life without requiring strin- uct soon (R. Blair, Marrone Bio Innovations,
gent temperature control, addressed a broad Davis, CA, Press Release 17 May 2012).
spectrum of weeds, may be used for both pre-
emergent and post-emergent weed control, can
be applied in multiple fields of use, and can be 13.6 WHAT WILL BE THE ROLE OF
used domestically and professionally. The path- BIOHERBICIDES IN THE FUTURE?
ogen was discovered by Dr Karen Bailey and
Jo-Anne Derby from Agriculture and Agri-Food The development of science-based technolo-
Canada, Saskatoon and developed with The gies for weed control using plant pathogens
Scotts Company, USA under a collaborative and other microorganisms has garnered inter-
research agreement. Conditional registration est and momentum since the 1970s when the
was approved for use on turfgrass in Canada principles of biological control were adapted
(2011) and full registration in the USA (2012) for for commercial purposes, as demonstrated by
use in turfgrass. Pilot-scale manufacturing pro- those researchers who developed the first bio-
cesses are being developed before product com- herbicides, DeVine and Collego. However, the
mercialization. Research is ongoing to collect rate of success has been lower than expected
data to support registration for agricultural use. given the number of products commercial-
ized relative to potential biocontrol agents
reported. Ash (2010) searched the ISI Web of
13.5.11 MBI-005 EP, USA 2012 Science database to find that from 1987 to 2009,
MBI-005 is made from a natural product there were 509 papers that mentioned ‘bioher-
compound produced by Streptomyces acidisca- bicides or mycoherbicides’ and that over 335
bies strain RL-110 for control of annual grasses, of the papers contained the phrase ‘potential
broadleaf and sedge weeds in turf, ornamentals bioherbiocide or mycoherbicide’ from which
and crops such as wheat, corn, and rice (EPA, he concluded that there are few attempts at
2012c). The natural compound, thaxtomin A, true commercialization of a product. This is
is a known fast-acting phytotoxin that causes probably a fair conclusion given the multidis-
necrosis and prevents cell biosynthesis and ciplinary and complex nature of the informa-
division when present at very low levels (i.e. tion and techniques required to reach the final
parts per million). It is the first bioherbicide goal; the process can appear overwhelming. It
product that is fermented and then heat-treated is also probably a reflection that many research-
to kill the bacterial cells before application. The ers concentrate more on the science side of the
product is not toxic to non-target organisms technology and advancing careers through
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