Internal Verification of Assessment Decisions - BTEC (RQF) : Higher Nationals

Higher Nationals
Internal verification of assessment decisions – BTEC (RQF)
INTERNAL VERIFICATION – ASSESSMENT DECISIONS
Programme title
Assessor Internal Verifier

Unit 13: Computing Research Project
Unit(s)
Assignment title
O. H. M. Fonseka
Student’s name
List which assessment Pass Merit Distinction
criteria the Assessor has
awarded.
INTERNAL VERIFIER CHECKLIST
Do the assessment criteria awarded match

those shown in the assignment brief? Y/N
Is the Pass/Merit/Distinction grade awarded

justified by the assessor’s comments on the Y/N
student work?
Has the work been assessed

Y/N
accurately?
Is the feedback to the student:
Give details:
• Constructive?
Y/N
• Linked to relevant assessment
criteria? Y/N
• Identifying opportunities for

improved performance? Y/N
Y/N
• Agreeing actions?
Does the assessment decision need
Y/N
amending?
Assessor signature Date
Internal Verifier signature Date
Programme Leader signature (if
Date
required)
Confirm action completed
Remedial action taken
Give details:
Internal Verifier
Date
signature
Programme Leader
Date
signature (if required)
Higher Nationals - Summative Assignment Feedback Form
Student Name/ID O.H. M. Fonseka

Unit Title Unit 13: Computing Research Project
Assignment Number 01 Assessor

27/01/2021 Date Received 1st
Submission Date
submission
Date Received 2nd
Re-submission Date
submission
Assessor Feedback:
LO1 Examine appropriate research methodologies and approaches as part of the research process
Pass, Merit & Distinction P1 P2 M1 D1

Descripts
Grade: Assessor Signature: Date:
Resubmission Feedback:
Internal Verifier’s Comments:
Signature & Date:

* Please note that grade decisions are provisional. They are only confirmed once internal and external moderation has taken place
and grades decisions have been agreed at the assessment board.
Assignment Feedback
Formative Feedback: Assessor to Student
Action Plan
Summative feedback
Feedback: Student to Assessor
Assessor Date
signature
Student Date
signature
Pearson
Higher Nationals in
Computing
Project Proposal
General Guidelines
1. A Cover page or title page – You should always attach a title page to your assignment. Use
previous page as your cover sheet and be sure to fill the details correctly.
2. This entire brief should be attached in first before you start answering.
3. All the assignments should prepare using word processing software.
4. All the assignments should print in A4 sized paper, and make sure to only use one side
printing.
5. Allow 1” margin on each side of the paper. But on the left side you will need to leave room
for binging.
Word Processing Rules
1. Use a font type that will make easy for your examiner to read. The font size should be 12
point, and should be in the style of Time New Roman.
2. Use 1.5 line word-processing. Left justify all paragraphs.
3. Ensure that all headings are consistent in terms of size and font style.
4. Use footer function on the word processor to insert Your Name, Subject, Assignment
No, and Page Number on each page. This is useful if individual sheets become detached
for any reason.
5. Use word processing application spell check and grammar check function to help edit your
assignment.
Important Points:
1. Check carefully the hand in date and the instructions given with the assignment. Late
submissions will not be accepted.
2. Ensure that you give yourself enough time to complete the assignment by the due date.
3. Don’t leave things such as printing to the last minute – excuses of this nature will not be
accepted for failure to hand in the work on time.
4. You must take responsibility for managing your own time effectively.
5. If you are unable to hand in your assignment on time and have valid reasons such as
illness, you may apply (in writing) for an extension.
6. Failure to achieve at least a PASS grade will result in a REFERRAL grade being given.
7. Non-submission of work without valid reasons will lead to an automatic REFERRAL. You
will then be asked to complete an alternative assignment.
8. Take great care that if you use other people’s work or ideas in your assignment, you
properly reference them, using the HARVARD referencing system, in you text and any
bibliography, otherwise you may be guilty of plagiarism.
9. If you are caught plagiarising you could have your grade reduced to A REFERRAL or at
worst you could be excluded from the course.
Student Declaration
I hereby, declare that I know what plagiarism entails, namely to use another’s work and to
present it as my own without attributing the sources in the correct way. I further understand
what it means to copy another’s work.
1. I know that plagiarism is a punishable offence because it constitutes theft.

2. I understand the plagiarism and copying policy of the Edexcel UK.
3. I know what the consequences will be if I plagiaries or copy another’s work in any of the
assignments for this program.
4. I declare therefore that all work presented by me for every aspects of my program, will
be my own, and where I have made use of another’s work, I will attribute the source in
the correct way.
5. I acknowledge that the attachment of this document signed or not, constitutes a binding
agreement between myself and Edexcel UK.
6. I understand that my assignment will not be considered as submitted if this document is
not attached to the attached.
Student’s Signature: mashihimasha@gmail.com Date:27/01/2021

(Provide E-mail ID) (Provide Submission Date)
Assignment Brief
Student Name /ID Number O. H. M. Fonseka
Unit Number and Title Unit 13 – Computing Research Project
Academic Year
Unit Tutor
Assignment Title Final Research Project Proposal
Issue Date
Submission Date 01/24/2021
IV Name & Date
Submission Format:
The submission is in the form of an individual written report. This should be written in
a concise, formal business style using single spacing and font size 12. You are required
to make use of headings, paragraphs and subsections as appropriate, and all work must
be supported with research and referenced using the Harvard referencing system. Please
also provide a bibliography using the Harvard referencing system.
Research Project Proposal - Please provide a referencing list using the Harvard
referencing system. The recommended word limit is minimum 2000 words.
Unit Learning Outcomes:
LO1. Examine appropriate research methodologies and approaches as part of the

research process.
Assignment Brief and Guidance:

Artificial Intelligence (AI)
Artificial intelligence (AI), sometimes called machine intelligence, is intelligence
demonstrated by machines, in contrast to the natural intelligence displayed by humans
and other animals. Computer science defines AI research as the study of "intelligent
agents": any device that perceives its environment and takes actions that maximize its
chance of successfully achieving its goals.
Artificial Intelligence covers computer systems which are able to perform tasks
normally requiring human intelligence. These tasks might include visual perception,
speech recognition, decision-making, and translation between languages and many
more.
AI impacts on every aspect of society and has the potential to be fully integrated into
daily work and social lives in the very near future.
Learner requires to select a suitable area from the areas given below to conduct a
research and further, needs to develop appropriate Topic, Research Questions
and Research Objectives.
• How does AI aid the in-depth exploration of an environment or system?
• What role may AI play in generating content for big brand products and
services?
• How does AI and machine learning contribute to the innovative use of
technology e.g. robotics, automotive transportation?
• What impact will the future influences of AI have in our daily lives?
……………………………………………………………………………………………………
……………………………………………………………………….
The Learner requires to produce a research proposal that clearly defines a research
question or hypothesis, supported by a literature review (Use the project proposal and
ethical consideration form template formats)
Project Proposal should cover following areas;
1. Definition of research problem or question. (This can be stated as a research

question, objectives or hypothesis)
2. Provide a literature review giving the background and conceptualization of
the proposed area of study. (This would provide existing knowledge and
benchmarks by which the data can be judged)
3. Consider and define research methodology and research process.
Demonstrate understanding of the pitfalls and limitations of the
methods chosen and ethical issues that might arise.
4. Draw points (1–3, above) together into a research proposal by getting agreement with
your tutor.
Grading Rubric
Grading Criteria Achieved Feedback
P1 Produce a research proposal that clearly defines a research Achieved Learner needs to read more research articles to provide a better answer
question or hypothesis, supported by a literature review
P2 Examine appropriate research methods and conduct Achieved Done

primary and secondary research.
M1 Evaluate different research approaches and methodology Not achieved Not achieved (Late Submission)
and make justifications for the choice of methods selected
based on philosophical/ theoretical frameworks.
D1 Critically evaluate research methodologies and processes Not achieved
in application to a computing research project to justify
chosen research methods and analysis.
Not achieved (Late Submission)
Research Proposal Form
Student Name: O.H.M. Fonseka: Student number: Neg/A-013290

Centre Name: ESOFT Metro Campus, Negombo
Tutor: Mrs.Dilini Kumanayake Date: 11/12/2020
Unit: Unit 13 – Computing Research Project
Proposed title: Artificial Intelligence Tools in
Bioinformatics
Section One: Title, objective, responsibilities
Title or working title of research project (in the form of a question, objective or
hypothesis):
• Artificial Intelligence Bioinformatics Tools
Research project objectives (e.g. what is the question you want to answer? What do you
want to learn how to do? What do you want to find out?):
• Bioinformatics is the application of tools of computation and analysis to capture
and interpret biological data. It is essential for management of data in modern
biology and medicine. Artificial intelligence is used in bioinformatics for the
analysis of genome particularly the analysis of the human genome project.
Artificial intelligence tools play a major role in this human genome project.
Objectives:
• What is Artificial intelligence?
• What is Bioinformatics?
• What are the existing tools in bioinformatics?
• Advantages of using artificial intelligence bioinformatics tools.
Section Two: Reasons for choosing this research project
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O. H. M. Fonseka Neg/A-013291 Assignment No.-01 Unit-13
Reasons for choosing the project (e.g. links to other subjects you are studying, personal
interest, future, knowledge/skills you want to improve, why the topic is important):
Human genome project is one of the achievements of bioinformatics. With the mapping
of human genome, the scientific world witnessed the completion of entire genome
sequences of several other organisms. The knowledge obtained through genome
projects can be used in producing medicine and for understanding more about disease.
The artificial intelligence tools play a major part in bioinformatics. So, the efficiency
and accuracy of the tools plays a huge role in the field of bioinformatics. “The
escalating amount of data from the genome projects has necessitated computer
databases that feature rapid assimilation, usable formats and algorithm software
programs for efficient management of biological data”.
Section Three: Literature sources searched
Use of key literature sources to support your research question, objective or hypothesis:
• Source: (Ezziane, 2006)
• Google Scholar
• ScienceDirect
Section Four: Activities and timescales
Activities to be carried out during the research project (e.g. research, How long
development, analysis of ideas, writing, data collection, numerical this will
analysis,
tutor meetings, production of outcome, evaluation, writing the report) take:
Data collection About 1
Data analysis Month
Data evaluation and reaching the conclusion.
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3|Page
Milestone one: Finding the features and facilities of existing virtual assistants have.
Target date (set by tutor): understanding artificial intelligence and bioinformatics
Milestone two: Finding the best and smartest virtual assistant.
Target date (set by tutor): understanding bioinformatics tools and evaluating their efficiencies
Section Four: Research approach and methodologies
Type of research approach and methodologies you are likely to use, and reasons for your choice:
• Qualitative research and Secondary Research.

• Surveys, interviews and questionnaires may not be practical for this research. So, I plan to conduct
a secondary research based on already published papers, books and articles.
What your areas of research will cover:

• Artificial intelligence tools related to bioinformatics.
Comments and agreement from tutor
Comments (optional):
I confirm that the project is not work which has been or will be submitted for another qualification and is appropriate.
Agreed: .................................................................................... (name) .................................................................................... date) ......................................................
Comments and agreement from project proposal checker (if applicable)
Comments (optional):
I confirm that the project is appropriate.
Agreed: .................................................................................... (name) .................................................................................... date) ......................................................
4|Page
Research Ethics Approval Form
All students conducting research activity that involves human participants or the use of data
collected from human participants are required to gain ethical approval before commencing
their research. Please answer all relevant questions and note that your form may be returned
if incomplete.
Section 1: Basic Details
Project title: Artificial Intelligence Bioinformatics Tools
Student name: O. H. M. Fonseka
Student ID number: Neg/A-013290
Programme: Computer Research Project
School: ESOFT metro campus Negombo
Intended research start date: 27/12/2020
Intended research end date: 27/01/2021
Section 2: Project Summary

Please select all research methods that you plan to use as part of your project:
• Interviews:
• Questionnaires:
• Observations:
• Use of Personal
Records:
• Data Analysis:
• Action
Research:
• Focus Groups:
• Other (please
specify):
5|Page
Secondary
Data Analysis
6|Page
Section 3: Participants
Please answer the following questions, giving full details where necessary.
Will your research involve human participants?
No
Who are the participants? Tick all that apply:
Ages 12-16: Young People aged 17–18: Adults:
How will participants be recruited (identified and approached)?

-
Describe the processes you will use to inform participants about what you are doing:
-
Studies involving questionnaires: Will participants be given the option of omitting questions
they do not wish to answer?
Yes: No:
If No please explain why below and ensure that you cover any ethical issues arising from this.
Not planning to use questionnaires as a research method.
Studies involving observation: Confirm whether participants will be asked for their informed
consent to be observed.
Yes: No:
Will you debrief participants at the end of their participation (i.e. give them a brief explanation
of the study)?
Yes: No:
Will participants be given information about the findings of your study? (This could be a
summary of your findings in general)
Yes: No:
7|Page
27/01/2021
Section 4: Data Storage and Security
Confirm that all personal data will be stored and processed in compliance with the Data
Protection Act (1998)
Yes: No:
Who will have access to the data and personal information?
• Only me
During the research:
Where will the data be stored?
• Laptop
Will mobile devices such as USB storage and laptops be used?
Yes: No:
If yes, please provide further details:
Are the research:

Where will the data be stored?
Laptop
How long will the data and records be kept for and in what format?
8|Page
The research data will be available even after the end of the research. It will be stored
as a in both word documentAnn.roshanie@esoft.lk
and pdf formats.
Will data be kept for use by other researchers?

Yes: No:
If yes, please provide further details:
9|Page
Section 5: Ethical Issues
Are there any features of your proposed work which may raise ethical concerns? If so, please
outline how you will deal with these:
There are no features of the proposed work which raise any ethical issues.
Section 6: Declaration
I have read, understood and will abide by the institution’s Research and Ethics Policy:
Yes: No:
I have discussed the ethical issues relating to my research with my Unit Tutor:
Yes: No:
I confirm that to the best of my knowledge:
The above information is correct and that this is a full description of the ethics issues that may arise in the course
my research.
Name: O. H. M. Fonseka
Date: 11/12/2020
Please submit your completed form to:
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Higher Nationals
Internal verification of assessment decisions – BTEC (RQF)
INTERNAL VERIFICATION – ASSESSMENT DECISIONS

Programme title HND in Computing
Assessor N. Senasinghe Internal Verifier A. R. Appuhamy
Unit(s)
Final Research
Assignment title
O. H. M. Fonseka
Student’s name
List which assessment Pass Merit Distinction
criteria the Assessor has
awarded. P1, P2, P3, P4, P5, P6, P7
INTERNAL VERIFIER CHECKLIST
Do the assessment criteria awarded match

those shown in the assignment brief? Y/N
Is the Pass/Merit/Distinction grade awarded

justified by the assessor’s comments on the Y/N
student work?
Has the work been assessed

Y/N
accurately?
Is the feedback to the student:
Give details:
• Constructive?
Y/N
• Linked to relevant assessment
criteria? Y/N
• Identifying opportunities for

improved performance? Y/N
Y/N
• Agreeing actions?
Does the assessment decision need
Y/N
amending?
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Assessor signature nadheera.senasinghe@esoft.lk Date 27/01/2021
Internal Verifier signature Ann.roshanie@esoft.lk Date 27/01/2021

Programme Leader signature (if
Date
required)
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Confirm action completed
Remedial action taken
Give details:
Internal Verifier
Date
signature
Programme Leader
Date
signature (if required)
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Higher Nationals - Summative Assignment Feedback Form
Student Name/ID O.H.M. Fonseka
Unit Title CRP
Assignment Number 01 Assessor N. Senasinghe
01/24/2021 Date Received 1st
Submission Date 20/05/2020 submission
27/01/2021
Date Received 2nd

Re-submission Date
submission
Assessor Feedback:
LO2 Conduct and analyse research relevant to a chosen computing research project

Descripts
LO3 Communicate the outcomes of a research project to identified stakeholders
Pass, Merit & Distinction P5 M3 D2

Descripts
LO4 Reflect on the application of research methodologies and concepts

Descripts
Grade: Pass Assessor Signature: nadheera.senasinghe@esoft.lk

Date: 27/01/2021
Resubmission Feedback:
Internal Verifier’s Comments: Agreed with the first marker
Signature & Date: Ann.roshanie@esoft.lk 27/01/2021

* Please note that grade decisions are provisional. They are only confirmed once internal and external moderation has taken place
and grades decisions have been agreed at the assessment board.
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Assignment Feedback
Formative Feedback: Assessor to Student
The learner did not participate for the assignment guidance sessions
Action Plan
Summative feedback
The learner has carried out a very basic research and has not properly read any
research articles. Furthermore it is a late submission so only a pass can be awarded
Feedback: Student to Assessor
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Assessor nadheera.senasinghe@esoft.lk Date 27/01/2021
signature
Student Date
signature
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Pearson
Higher Nationals in
Computing
Assignment 01
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General Guidelines
6. A Cover page or title page – You should always attach a title page to your assignment. Use
previous page as your cover sheet and be sure to fill the details correctly.
7. This entire brief should be attached in first before you start answering.
8. All the assignments should prepare using word processing software.
9. All the assignments should print in A4 sized paper, and make sure to only use one side
printing.
10. Allow 1” margin on each side of the paper. But on the left side you will need to leave room
for binging.
Word Processing Rules
6. Use a font type that will make easy for your examiner to read. The font size should be 12
point, and should be in the style of Time New Roman.
7. Use 1.5 line word-processing. Left justify all paragraphs.
8. Ensure that all headings are consistent in terms of size and font style.
9. Use footer function on the word processor to insert Your Name, Subject, Assignment
No, and Page Number on each page. This is useful if individual sheets become detached
for any reason.
10. Use word processing application spell check and grammar check function to help edit your
assignment.
Important Points:
10. Check carefully the hand in date and the instructions given with the assignment. Late
submissions will not be accepted.
11. Ensure that you give yourself enough time to complete the assignment by the due date.
12. Don’t leave things such as printing to the last minute – excuses of this nature will not be
accepted for failure to hand in the work on time.
13. You must take responsibility for managing your own time effectively.
14. If you are unable to hand in your assignment on time and have valid reasons such as
illness, you may apply (in writing) for an extension.
15. Failure to achieve at least a PASS grade will result in a REFERRAL grade being given.
16. Non-submission of work without valid reasons will lead to an automatic REFERRAL. You
will then be asked to complete an alternative assignment.
17. Take great care that if you use other people’s work or ideas in your assignment, you
properly reference them, using the HARVARD referencing system, in you text and any
bibliography, otherwise you may be guilty of plagiarism.
18. If you are caught plagiarising you could have your grade reduced to A REFERRAL or at
worst you could be excluded from the course.
18 | P a g e
Student Declaration
I hereby, declare that I know what plagiarism entails, namely to use another’s work and to
present it as my own without attributing the sources in the correct way. I further understand
what it means to copy another’s work.
7. I know that plagiarism is a punishable offence because it constitutes theft.

8. I understand the plagiarism and copying policy of the Edexcel UK.
9. I know what the consequences will be if I plagiaries or copy another’s work in any of the
assignments for this program.
10. I declare therefore that all work presented by me for every aspects of my program, will
be my own, and where I have made use of another’s work, I will attribute the source in
the correct way.
11. I acknowledge that the attachment of this document signed or not, constitutes a binding
agreement between myself and Edexcel UK.
12. I understand that my assignment will not be considered as submitted if this document is
not attached to the attached.
Student’s Signature: mashihimasha@gmail.com Date: 27/01/2021

(Provide E-mail ID) (Provide Submission Date)
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Assignment Brief
Student Name /ID Number O.H.M. Fonseka
Unit Number and Title Unit 13 – Computing Research Project
Academic Year
Unit Tutor
Assignment Title Final Research Project Proposal
Issue Date
Submission Date 01/24/2021
IV Name & Date
Submission Format:
Unit Learning Outcomes:
LO2. Conduct and analyse research relevant to a chosen computing research project
LO3. Communicate the outcomes of a research project to identified stakeholders
LO4. Reflect on the application of research methodologies and concepts
Assignment Brief and Guidance:
Learner is now required to provide a comprehensive research project report based on the findings of secondary
and primary researches carried out on the project proposal submitted in the previous section.
The Learner requires to produce a detailed research project report covering following areas
• Conduct primary and secondary research using appropriate methods for a computing
research project that consider costs, access and ethical issues.
• Carry out your research and apply appropriate analytical tools to analyse research
findings and data.
• Draw conclusion based on the research findings.
• Communicate the outcomes of your research project to the identified audience.
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• Reflect on the success of your research project and your performance at the end of the project
with the inclusion of a project evaluation and recommendations (Consider alternative research
methodologies and lessons learnt in view of the outcomes)
The submission is in the form of an individual written report. This should be written in a concise, formal
business style using single spacing and font size 12. You are required to make use of headings, paragraphs
and subsections as appropriate, and all work must be supported with research and referenced using the Harvard
referencing system.
Report format- Please provide a referencing list using the Harvard referencing system. The recommended
word limit is minimum 4,500 words
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Grading Rubric
Grading Criteria Achieved Feedback
P3 Conduct primary and secondary research using

appropriate methods for a computing research project that
consider costs, access and ethical issues Achieved Primary and secondary research could utilize more theoretical
knowledge
P4 Apply appropriate analytical tools to analyse research

Achieved Excel based tools seems to have been used but not clear
findings and data.
M2 Discuss merits, limitations and pitfalls of approaches to

data collection and analysis. Not achieved Not achieved (Late Submission)
P5 Communicate research outcomes in an appropriate

Achieved
manner for the intended audience. Very basic communication is done but does not have proper depth
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M3 Coherently and logically communicate outcomes to the
intended audience, demonstrating how outcomes meet set Not achieved
research objectives.
D2 Communicate critical analysis of the outcomes and make

valid, justified recommendations. Not achieved Not achieved (Late Submission)
P6 Reflect on the effectiveness of research methods applied

for meeting objectives of the computing research project. Achieved Reflection is quite lacking in content
P7 Consider alternative research methodologies and lessons

learnt in view of the outcomes. Achieved Done but very limited in conten
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M4 Provide critical reflection and insight that results in
recommended actions for improvements and future research
considerations. Not achieved Not achieved (Late Submission)
D3 Demonstrate reflection and engagement in the resource

process leading to recommended actions for future
improvement. Not achieved
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Acknowledgement
First and foremost, I would like to thank our Computing Research Project module lecturer
Ms Dilini for her enormous support throughout this module and the assignment. I would
also like to thank Ms. Anne for giving us expert advice and encouraging us to achieve our
final goals.
And I would like to thank my colleagues specially Roshalini for helping and being with
me throughout this assignment. Finally, I would like to thank my parents and my brother
for the huge support they showed in completing this assignment successfully.
Date: Name:
27/01/2021 O. H. Minoli Fonseka
HND in Computing Student
ESOFT Metro Campus
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Table of Contents
Research Proposal Form ...................................................................................................... 1
Research Ethics Approval Form .......................................................................................... 5
Acknowledgement ............................................................................................................. 25
Table of Contents ............................................................................................................... 26
Table of Figures ................................................................................................................. 27
Task 1 ................................................................................................................................. 28
1.1 Proposal .................................................................................................................... 28
1.2 Introduction .............................................................................................................. 30
1.2 Research methodologies .......................................................................................... 31
1.2.1 Primary Research .............................................................................................. 31
1.2.2 Secondary research ........................................................................................... 31
Task 2: Carry out your research and apply appropriate analytical tools to analyze research
findings and data. ............................................................................................................... 32
What is artificial intelligence? ................................................................................... 32
What is bioinformatics? ............................................................................................. 32
Artificial intelligence tools related to bioinformatics. ............................................... 32
Advantages of using of artificial intelligence bioinformatic tools. ............................ 37
Task 3: Conclusion according to the research findings ..................................................... 40
Task 4: Reflect on the success of your research project and your performance at the end of
the project with the inclusion of a project evaluation and recommendations (Consider
alternative research methodologies and lessons learnt in view of the outcomes).............. 41
Gantt chart .......................................................................................................................... 42
Self-criticism ...................................................................................................................... 43
Conclusion ......................................................................................................................... 44
Harvard References ............................................................................................................ 45
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Table of Figures
Figure 1: The list of bioinformatic tools provided by NCBI ............................................. 34
Figure 2: 1000 Genome Browser ....................................................................................... 35
Figure 3: Genome BLAST ................................................................................................. 36
Figure 4: Gantt Chart ......................................................................................................... 42
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Task 1
1.1 Proposal
1. Title of the project: Artificial Intelligence Bioinformatics Tools

2. Estimated project duration: One month
3. Project scope and objectives:
Scope:
Bioinformatics is the application of tools of computation and analysis to capture and
interpret biological data. It is essential for management of data in modern biology and
medicine. Artificial intelligence is used in bioinformatics for the analysis of genome
particularly the analysis of the human genome project. Artificial intelligence tools play a
major role in this human genome project.
Objectives:
• What is Artificial intelligence?
• What is Bioinformatics?
• What are the existing tools in bioinformatics?
• Advantages of using artificial intelligence bioinformatics tools.
4. Reasons for choosing this research project:

Human genome project is one of the achievements of bioinformatics. With the mapping
of human genome, the scientific world witnessed the completion of entire genome
sequences of several other organisms. The knowledge obtained through genome projects
can be used in producing medicine and for understanding more about disease.
The artificial intelligence tools play a major part in bioinformatics. So, the efficiency and
accuracy of the tools plays a huge role in the field of bioinformatics. “The escalating
amount of data from the genome projects has necessitated computer databases that feature
rapid assimilation, usable formats and algorithm software programs for efficient
management of biological data”.
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5. Milestones of the project
Milestone one: understanding artificial intelligence and bioinformatics

Milestone two: understanding bioinformatics tools and evaluating their efficiencies
6. Type of research approach and methodologies you are likely to use, and reasons
for the choice:
Qualitative research and Secondary Research.
Surveys, interviews and questionnaires may not be practical for this research. So, I plan
to conduct a secondary research based on already published papers, books and articles.
7. Areas of research that topic will cover: Artificial intelligence tools related to
bioinformatics
8. Project cost:
Categories Cost
Internet Bill 495/=
Paper cost 200/=
Buying research articles and books 3000/=
Total 3695/=
Table 1: Project Cost
Source: (Author’s work, 2021)
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1.2 Introduction
Along with the availability of different types of artificial intelligence (AI) algorithms, AI
has gained attention in bioinformatics. Most of the researchers currently apply the ready-
made systems to organize and mine their databases. In the current bioinformatics field,
there are many intelligent methods. Thus, the researchers face difficulty when selecting
most suitable methods. So, researchers require intelligence tools, which provides data in
a comprehensible manner, explained with context, estimates of accuracy and
clarifications. The major objective of this article is to review the use of AI tools in the
field of bioinformatics. Bioinformatics have risen from the requirements of biologists to
apply and support interpretation of the massive amounts of data that are continuously
being collected in genomic research. The fundamental inspiration for many of the
bioinformatics is the evolution of organisms and the difficulty of working with inaccurate
data.
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1.2 Research methodologies
Qualitative research and secondary research.

These research methods are used to research about the topic “Artificial intelligence tools
related to bioinformatics.”
1.2.1 Primary Research

Primary research is can be defined as the collection of data for the first time using research
methods such as interviews, surveys, questionnaires, etc.
But it is not possible to perform primary research for this topic due to the unavailability
of the resources.
1.2.2 Secondary research

Research articles
Research articles can be used to identify information related to the subject or question in
concern. ScienceDirect, ResearchGate and Google Scholar are some websites and search
engines which provides research articles for academic purposes.
Websites
National Center for Biotechnology Information website can be used to find information
about newest findings and researches related to bioinformatics. It also provides references
and links to other websites which can be used to find relevant information.
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Task 2: Carry out your research and apply appropriate
analytical tools to analyze research findings and data.
What is artificial intelligence?

Artificial intelligence is the recreation of human intelligence in machines to mimic human
actions and think like a human. Any machine that has the characteristics related to human
intelligence can be known as a machine with artificial intelligence.
Learning, reasoning, and perception are the goals of artificial intelligence. Thus, there are
countless amount applications of artificial intelligence. The technology is currently used
in many different fields and industries such as health care, medicine, etc.
What is bioinformatics?
Bioinformatics is a subdiscipline of biology and computer science concerned with the
acquisition, storage, analysis, and dissemination of biological data, most often DNA and
amino acid sequences. Bioinformatics uses computer programs for a variety of
applications, including determining gene and protein functions, establishing evolutionary
relationships, and predicting the three-dimensional shapes of proteins.
Source: (P. Austin, 2021)
Artificial intelligence tools related to bioinformatics.

The NCBI provides a vast range of bioinformatics tools which supports data analysis and
data mining. In addition to that, the website provides API for the development of new
tools and applications.
In addition to the NCBI there are several other websites which provides bio informatics
tools. Some of them are,
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• Unigene (www.ncbi.nlm.nih.gov/UniGene)—gene sequence collection
containing data on map location of genes in chromosomes
• European Bioinformatic Institute (www.ebi.ac.uk)—centre for research and
services in bioinformatics; manages databases of biological data
• Ensembl (www.ensembl.org)—automatic annotation database on genomes
• SWISS-PROT (www.expasy.org/sprot/)—important protein database with
sequence data from all organisms, which has a high level of annotation (includes
function, structure, and variations) and is minimally redundant (few duplicate
copies)
• International Society for Computational Biology (www.iscb.org/)—aims to
advance scientific understanding of living systems through computation; has
useful bioinformatic links
Source: (Bayat, 2002)
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Figure 1: The list of bioinformatic tools provided by NCBI
Source: (Analyze - NCBI, 2021)
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In addition to the above provided list of tools, there are uncountable number of other tools
provided by several other websites. Out of all these tools some of the most popular
artificial intelligence tools in bioinformatics are,
1000 Genomes Browser
Figure 2: 1000 Genome Browser

Source: (1000 Genomes Browser, 2021)
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Genome BLAST
Figure 3: Genome BLAST

Source: (Nucleotide BLAST: Search nucleotide databases using a nucleotide query, 2021)
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Advantages of using of artificial intelligence bioinformatic tools.
The main bioinformatic tools are the internet and computer applications. There are various
programs and databases to analyse DNA and proteins. Thus, anyone who has the access
to the internet or the relevant websites can use bioinformatic tools. But, it does not make
handling and analysing raw genomic data easier and efficient.
AI technology supports generation of information in bioinformatics much quicker.
Moreover, these tools can make accurate predictions.
AI bioinformatics tools facilitate creations of advanced methods for biological sequence
comparison, knowledge management, and protein-protein interaction. There are many
applications of AI in bioinformatics. Some of them are,
• Genome Sequencing
• Gene Expression Analysis
• Protein Classification
• Protein Structure Generative Modeling
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Genome Sequencing
The use of AI algorithms enhances the speed of finding the host gene, which further
enhances the sequencing process that can help get an accurate gene structure to provide
personalized and life-saving therapies to patients. For instance, ML algorithms can find
patterns from historical DNA datasets and then predict the odds of an individual
developing a disease according to his or her genome sequencing. All these medications
done with the help of genome sequencing commences by analyzing gene expressions.
Gene Expression Analysis
DNA microarray is a chip that has a collection of DNA spots attached to it. Researchers
use microarrays to collect and measure gene expressions in organisms. Gene expression
is converting the information extracted from a gene and using it to create a functional
gene product like protein. Machine learning can analyze, identify, and classify patterns in
gene expressions. Microarrays and machine learning techniques, when combined, can
help detect tumor cells at a molecular level. This will enable doctors to provide
personalized cancer treatments to patients based on the genetic build-up of a tumor.
Protein Classification
with recent advancements in microscopy throughputs, cellular images are created at high
space, and classification of proteins manually has become challenging. Computer vision
can gain understanding from these cellular images that can be used by ML algorithms to
classify proteins.
Source: (Joshi, 2021)
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Protein Structure Generative Modeling
Generative models can generate new data instances that can be used to train AI algorithms
for various fields of bioinformatics. These models aim to learn data representation and
creates new data instances that look like the original one. One of the efficient approaches
to create generative models is Generative Adversarial Networks (GANs) that are types of
neural networks and uses a generator and a discriminator network for generating protein
structures. The generator network tries to generate a natural image, whereas the
discriminator tries to determine whether the image generated by the former network is
fake or real. And then, the images that are determined as real can be used to train AI
algorithms.
Source:
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Task 3: Conclusion according to the research findings
According to research findings the artificial intelligence bioinformatics are efficient and
effective. Moreover, it has contributed to the development of new medicine and several
other developments of health care sector. If normal applications or manual employees
were used for the analysis of data in the field of bioinformatics, these achievements would
not have been accomplished. Thus, artificial intelligence bioinformatic tools are both
effective and advantages for the healthcare sector.
In conclusion, development of new more developed artificial intelligence bioinformatics
tools will increase the rate of production of cures for new diseases and medicines.
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Task 4: Reflect on the success of your research project and your
performance at the end of the project with the inclusion of a
project evaluation and recommendations (Consider alternative
research methodologies and lessons learnt in view of the
outcomes)
The project is not very successful because primary research methodologies were not used.
The topic in concern is new and therefore, there is a limitation to finding information
using internet or published articles. Thus, it is necessary to conduct a primary research to
confirm the provided secondary research outcome.
In addition to that, the chosen research topic was some what advance for the HND level.
Therefore, the project is unsuccessful.
Lessons learned:
• It is necessary to conduct primary researches to increase the success of a project.
• There is a possibility that secondary research data are not be 100% correct.
• The above research should be further carried out after getting guidance from an
expert in that field.
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Gantt chart
Figure 4: Gantt Chart

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Self-criticism
In this self-criticism, I will inspect how I worked on in this assignment and how I
conducted the research overcoming many obstacles. I accomplished project management
skills and improved my knowledge about artificial intelligence. I researched for
information using the internet and used the textbook when doing the tasks.
I faced so many problems while conducting the secondary research system. At first, I had
very poor knowledge about how to conduct a research. Moreover, there were not many
references to topic I chose. But, with the time the skills and knowledge improved. So, it
became easy to develop a successful system. Moreover, I got help from my colleagues
and the lecturers in charge of the module to overcome the difficulties and obstacles
throughout the development of this website. Nevertheless, I faced all these challenges in
the best way I can and finished the assignment.
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Conclusion
For this assignment a secondary research was conducted using appropriate methods
considering costs, access and ethical issues. Then appropriate analytical tools to were
applied to analyze research findings and data. This assignment also includes a discussion
of merits, limitations and pitfalls of approaches to data collection and analysis. After that
the research outcomes were communicating in an appropriate manner for the intended
audience. Finally, a critical analysis of the outcomes and valid, justified recommendations
were made.
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Harvard References
P. Austin, C., (2021). Bioinformatics. [online] Genome.gov. Available at:
https://www.genome.gov/genetics-glossary/Bioinformatics [Accessed 26 January 2021].
Bayat, A., (2002). Bioinformatics. [online] NCBI. Available at:
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1122955/#B13 [Accessed 27 January
2021].
Ezziane,, Z., (2006). Applications Of Artificial Intelligence In Bioinformatics: A Review,
Expert Systems With Applications. 1st ed. pp.Pages 2-10.
Ncbi.nlm.nih.gov. 2021. 1000 Genomes Browser. [online] Available at:
https://www.ncbi.nlm.nih.gov/variation/tools/1000genomes/ [Accessed 27 January
2021].
Blast.ncbi.nlm.nih.gov. (2021). Nucleotide BLAST: Search Nucleotide Databases Using
A Nucleotide Query. [online] Available at:
https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&PAGE_TYPE=BlastSearc
h&LINK_LOC=blasthome [Accessed 27 January 2021].
Ncbi.nlm.nih.gov. (2021). Analyze - NCBI. [online] Available at:
https://www.ncbi.nlm.nih.gov/home/analyze/ [Accessed 27 January 2021].
Joshi, N., (2021). Leveraging The Benefits Of Artificial Intelligence Technology In
Bioinformatics. [online] Bbntimes.com. Available at:
https://www.bbntimes.com/technology/leveraging-the-benefits-of-artificial-intelligence-
technology-in-bioinformatics [Accessed 27 January 2021].
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Internal Verification of Assessment Decisions - BTEC (RQF) : Higher Nationals

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Internal verification of assessment decisions – BTEC (RQF)

INTERNAL VERIFICATION – ASSESSMENT DECISIONS

Assessor Internal Verifier

Do the assessment criteria awarded match

Is the Pass/Merit/Distinction grade awarded

Has the work been assessed

• Identifying opportunities for

Assessor signature Date

Student Name/ID O.H. M. Fonseka

Assignment Number 01 Assessor

Pass, Merit & Distinction P1 P2 M1 D1

Grade: Assessor Signature: Date:

Grade: Assessor Signature: Date:

Internal Verifier’s Comments:

Signature & Date:

Feedback: Student to Assessor

Word Processing Rules

1. I know that plagiarism is a punishable offence because it constitutes theft.

Student’s Signature: mashihimasha@gmail.com Date:27/01/2021

Unit Number and Title Unit 13 – Computing Research Project

Assignment Title Final Research Project Proposal

Submission Date 01/24/2021

IV Name & Date

Unit Learning Outcomes:

LO1. Examine appropriate research methodologies and approaches as part of the

Assignment Brief and Guidance:

Project Proposal should cover following areas;

1. Definition of research problem or question. (This can be stated as a research

Grading Criteria Achieved Feedback

P2 Examine appropriate research methods and conduct Achieved Done

Student Name: O.H.M. Fonseka: Student number: Neg/A-013290

Section One: Title, objective, responsibilities

Section Two: Reasons for choosing this research project

Section Three: Literature sources searched

Section Four: Activities and timescales

Target date (set by tutor): understanding artificial intelligence and bioinformatics

Milestone two: Finding the best and smartest virtual assistant.

Section Four: Research approach and methodologies

• Qualitative research and Secondary Research.

What your areas of research will cover:

Comments and agreement from tutor

Agreed: .................................................................................... (name) .................................................................................... date) ......................................................

Comments and agreement from project proposal checker (if applicable)

I confirm that the project is appropriate.

Agreed: .................................................................................... (name) .................................................................................... date) ......................................................

Section 1: Basic Details

Project title: Artificial Intelligence Bioinformatics Tools

Student name: O. H. M. Fonseka

Student ID number: Neg/A-013290

Programme: Computer Research Project

School: ESOFT metro campus Negombo

Intended research start date: 27/12/2020

Intended research end date: 27/01/2021

Section 2: Project Summary

Ages 12-16: Young People aged 17–18: Adults:

How will participants be recruited (identified and approached)?

Are the research:

Will data be kept for use by other researchers?

Please submit your completed form to:

INTERNAL VERIFICATION – ASSESSMENT DECISIONS

Do the assessment criteria awarded match

Is the Pass/Merit/Distinction grade awarded