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diseases and certain prion been identified. In yeast, most of


diseases. In addition, autophagy these proteins localize at least
Primer
is unique as a mechanism that transiently to the pre-
can remove entire organelles, an autophagosomal structure, which
important task beyond the may be the site of autophago- Selection and the
abilities of the proteasome that
allows for the removal of
some formation (Figure 1).
origin of species
damaged or obsolete organelles, What don’t we know about it?
potentially eliminating oxidative Plenty... We do not definitively Arianne Y.K. Albert and
stress or allowing cellular know the source of the Dolph Schluter
remodeling. sequestering membrane (but the
ER is probably involved) and, Why are there so many species on
Do we know anything about its although many protein earth? Answering this question
regulation? A little. In animal components have been identified, requires an understanding of how
cells, components of the class I we don’t really know the function species form. An obvious place to
phosphatidylinositol (PI) 3-kinase of most of them. Because of these start looking for answers is
pathway including Akt and Tor act two limitations, we do not know Darwin’s ‘On the Origin of Species
as inhibitors, whereas the lipid how the sequestering vesicle by Means of Natural Selection’
phosphatase PTEN, class III PI —the hallmark of macroautophagy (1859). But his title is deceptive:
3-kinase and p70 S6 kinase — is formed. Another major issue Darwin’s book is about adaptation
appear to be positive regulators. is how specificity is achieved, and the origin of varieties and has
In yeast, Tor kinase and protein either for the removal of a surprisingly little to say about
kinase A are inhibitory, while PI 3- particular organelle or the selection and “the origin of
kinase is required for autophagy. recognition of invading pathogens. species — that mystery of
Many questions remain regarding mysteries”.
the networked interactions that Where can I find out more? To be fair to Darwin, it was not
control autophagic responses to Kirkegaard, K., Taylor, M.P. and for another 80 years or so that the
Jackson, W.T. (2004). Cellular
different stimuli. modern view of the species was
autophagy: surrender, avoidance
and subversion by microorganisms. developed. The ‘biological
What else do we know? Many Nat. Rev. Microbiol. 2, 301–314. species concept’ defines a
autophagy-specific proteins have Levine, B., and Klionsky, D.J. (2004). species as one or more
been identified in yeast and Development by self-digestion: populations of potentially
molecular mechanisms and
shown to have orthologs in higher biological functions of autophagy. interbreeding organisms that are
eukaryotes, including two systems Dev. Cell 6, 463–477. reproductively isolated from other
that involve ubiquitin-like proteins. Shintani, T., and Klionsky, D.J. (2004). such groups. Humans and chimps
One of them, Atg8, modifies Autophagy in health and disease: a are today separate species not
double-edged sword. Science 306,
phosphatidylethanolamine and 990–995. only because we are genetically
may act as a structural and phenotypically distinct, but
component of the autophago- Life Sciences Institute, University of because we are reproductively
some. A further 27 other proteins Michigan, Ann Arbor, Michigan 48109- isolated. Neither finds the other
that act only in autophagy have 2216, USA. E-mail: klionsky@umich.edu attractive when choosing a mate
(‘premating isolation’) and very
Expansion and Nucleation likely, hybrids are inviable or
completion sterile (‘postmating isolation’).
S
Autophagosome A Reproductive isolation is therefore
P
the most salient evolved feature of
Cytoplasm
Lysosome a species, at least in sexual
or organisms. Even ‘good’ species
vacuole may hybridize once in a while, but
Autophagy
to meet the species criterion the
flow of genes between them must
be negligible. The study of
speciation is therefore the study
of how reproductive isolation
Breakdown evolves, premating or postmating,
Fusion
between populations.
AB Natural selection is the
Current Biology differential survival or
reproductive success of
Figure 1. The process of macroautophagy.
individuals differing in phenotype
A double-membrane-bound autophagosome sequesters cytoplasm. Fusion with the
within a population. Sexual
lysosome or vacuole releases the single-membrane autophagic body (AB) that is
broken down, allowing degradation of the cargo and recycling of the resulting macro- selection, by contrast, is the
molecules. In yeast, most of the Atg proteins localize to the pre-autophagosomal struc- differential mating success of
ture (PAS), which may be the site of nucleation for the sequestering vesicle. phenotypically different
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1.0 is largely complete in one fell


swoop, sexual reproduction
breaks up these favored
0.8 combinations every generation
(selection–recombination
antagonism).
Isolation index

0.6 Both difficulties are easily


solved by spatial separation
between populations, reducing
0.4
gene flow (the ‘allopatric’ and
‘parapatric’ models). Send some
0.2 of the small-beaked birds to a
second island having only large
seeds and see a large beak evolve
0.0 there without impediment. Now,
an intermediate beak size
0.00 0.05 0.10 0.15 0.20 improves fitness — the fitness
Genetic distance Current Biology valley is eliminated. Genetic
changes that yield reproductive
Figure 1. Reproductive isolation between species of Silene (campion) in relation to isolation between the populations
gene sequence differences in internal transcribed spacer (ITS) regions of the genome. on the different islands evolve
The isolation index ranges from 0 (no isolation) to 1 (complete isolation). Reproductive more readily because gene flow
isolation was calculated as a combination of two measures: the proportion of failed between islands is too low to
pollinations between the species and the proportion of infertile pollen grains in their F1 impede its build-up. With the
hybrids. Redrawn with permission from: Moyle, L.C., Olson, M.S., and Tiffin, P. (2004).
Patterns of reproductive isolation in three angiosperm genera. Evolution 58, 1195− −1208.
accumulation of genetic
The flower image on the right is of fire pink (Silene virginica), native to the eastern US differences between islands,
(photo: Dan Tenaglia). sufficient reproductive isolation
may evolve that the large-beaked
individuals. These two processes that beak size is determined by population can recolonize and
are the most potent drivers of two genes that behave additively: persist on the first island: two
evolutionary change within the small-beaked colonists are coexisting species at last.
populations. Here we shall aabb whereas the optimal beak These obstacles explain why
consider some of their for handling large seeds is AABB. most speciation events in nature
contributions to the buildup of This scenario appears to be ripe appear to have included a stage in
reproductive incompatibilities for a speciation event, one which populations were spatially
between populations — the origin yielding two reproductively separated. Yet, speciation can
of species. isolated species each adapted to happen in the single-island case,
a different seed size. Will it without spatial separation (the
Obstacles to speciation happen? Possibly yes, but ‘sympatric’ model). Convenient
Speciation is intimately tied to probably not, for two reasons. genetics can help. For example, if
genetic divergence between First, evolving a large beak faces the alleles at a mating locus are p
populations (Figure 1). On the problem that every new (mate randomly) and P (mate with
average, the greater the genetic mutant individual — aaBb or aAbb another having the same beak
distance between any pair of — has lower fitness and is size), then the
populations or species, the lower selected against (the fitness valley selection–recombination
the frequency of mating and problem). Second, even if the antagonism goes away. Only a
fertilization events, and the lower fitness valley could somehow be handful of compelling cases of
the mating success, fertility and crossed, and AABB genotypes sympatric speciation have been
viability of hybrids. What could be generated, gene flow hinders the described.
simpler to understand? evolution of reproductive isolation The host-races of the apple
Yet, speciation is not always between the beak types. Imagine maggot fly (Rhagoletis pomonella)
easy. The two main obstacles are a mating locus with two alleles: provide the best known example
gene flow and, paradoxically, allele p predisposes its bearer to of sympatric speciation in
natural selection. To appreciate mate with small beaked progress. Two host-races, one
both, imagine a few small-beaked individuals, whereas birds with living on apples and one living on
finches blown to a little remote allele P prefer large beaked hawthorn, occur in sympatry in
island containing both small and individuals as mates. Natural the northeastern United States.
large seeds in mixed patches. selection will increase the Hawthorn Rhagoletis colonized
Small beaks are best adapted to frequency of aabbpp and apple trees fewer than 150 years
feeding on the small seeds, but a AABBPP genotypes because they ago. The new race has already
large beak increases ability to are best adapted to the acquired adaptations to its new
handle the large seeds. environment and make the fewest host, and individuals that return to
Intermediate beaks are inferior on inferior (heterozygote) offspring. the ancestral host fare badly.
both seed types. Imagine further Yet, unless reproductive isolation Females of each host-race prefer
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to lay eggs on their own type of


fruit, and as mating too occurs on 0.6
the fruit, premating isolation has
followed. It is likely that the new 0.5
host-race arose and accumulated

Probability of spawning
genetic differences in sympatry, 0.4
but some genes underlying
adaptation to apples reside in a
0.3
chromosomal inversion that Different lake
originated in Mexico. Northward Same lake
spread of this inversion, and its 0.2
associated genes, probably
facilitated adaptation to apple. 0.1
Selection on a mix of genetic A B C D
variation produced in sympatry 0.0
and allopatry appears to be
driving speciation between Limnetic x Benthic Limnetic x Limnetic
Benthic x Benthic
hawthorn and apple maggot flies.
Ecotypes Current Biology

Natural selection
Figure 2. Probability of spawning according to ecological differences between
Natural selection is probably independently evolved populations and species of threespine sticklebacks.
involved in most cases of Points on left are from mating trials between sympatric (A) and allopatric (B) limnetics
speciation. Many scenarios are and benthics. Points on right are from trials between conspecific limnetics or conspe-
possible, but here we focus on cific benthics (D), and between allopatric limnetics or allopatric benthics (C). Spawning
two of the most likely. In the first, probability is low when different ecotypes are tested, but higher when trials involve the
reproductive isolation evolves same ecotypes even when the populations are from different lakes. The probability of
between populations as a by- spawning is adjusted to take into account the different propensity of males from differ-
ent populations to spawn in captivity. Redrawn with permission from: Rundle, H.D.,
product of divergent natural Nagel, L., Boughman, J.W., and Schluter, D. (2000). Natural selection and parallel spe-
selection that favors different ciation in sympatric sticklebacks. Science 287, 306-308. The larger fish in the photo-
genotypes in contrasting graph is a benthic female and the smaller fish is a limnetic female, both from Paxton
environments. Selection does not Lake on Texada Island, British Columbia (photo: Todd Hatfield).
directly favor the evolution of
reproductive isolation, at least not only between the species within a by-product of genetic divergence,
initially. Rather, selection favors lake, but also between the but here not even divergence is
alternative morphological, phenotypically different forms from favored by natural selection.
physiological and behavioral traits different lakes (Figure 2). In Selection drives new mutations to
in contrasting environments, and contrast, there is little reproductive fixation, but speciation happens
some of these differences isolation between populations of only because of the occurrence of
incidentally yield premating the same ecological type from unique mutations in different
and/or postmating reproductive different lakes. Reproductive populations.
incompatibilities between the isolation is therefore associated A possible example comes from
populations. The key feature of with adaptation to different the fruit flies, Drosophila
this process is that speciation is environments, strongly implicating melanogaster and D. simulans.
environment driven. divergent natural selection in the Hybrid males between the two
Important evidence for this origin of these species. The buildup species are inviable, a feature that
process comes from cases in of these mating incompatibilities is has been traced to the gene
which reproductive isolation has strongly connected to divergence Nucleoporin-96 (Nup96), which
evolved independently multiple in body size. encodes a protein in the nuclear
times across similar environmental In the second scenario, different pore complex. Nup96 from D.
gradients (‘parallel speciation’). advantageous but incompatible simulans interacts negatively with
Threespine sticklebacks mutations arise and fix in separate a gene or genes on the X
(Gasterosteus sp.) provide several populations that otherwise inhabit chromosome of D. melanogaster,
examples. Reproductively isolated similar environments (uniform causing death of male individuals
pairs of species inhabit small lakes natural selection). For example, carrying both. Nup96 has
of coastal British Columbia, one population might fix a undergone adaptive evolution in
Canada. Each pair consists of a mutation that improves a signaling one or both species, as implied by
large-bodied ‘benthic’ species protein and another fixes a an excess of amino acid
adapted to feeding in the littoral mutation improving its binding substitutions compared with a
habitat of lakes, and a small- site. A hybrid between the two neutral model of evolution. The
bodied ‘limnetic’ species feeding in populations would carry both new question now is: what kind of
open water on zooplankton. Each mutations, but its fitness might be selection led to the changes in
pair appears to have an reduced if the new protein does Nup96 and the X-linked gene(s)?
independent origin, yet not bind to the new site. Did different advantageous
reproductive isolation is strong not Reproductive isolation builds as a mutations really fix in the two
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overlap discriminate against D.


persimilis males when choosing
mates, whereas females outside
the overlap zone discriminate
less. Similar patterns have been
found in other taxa, although the
pattern is not universal. In most
cases we still do not know how
large is the effect of reinforcement
in speciation relative to other
processes.

Sexual selection
Sexual selection occurs when
H. annuus (parent) H. petiolaris (parent) individuals of one sex (for
example females) preferentially
mate with members of the other
sex (males) according to trait
differences, or when differences
between males affect competition
among them for access to
fertilization. The evolutionary
outcome of such selection has
produced the extravagant colors,
sounds, genital shapes and
behavioral displays that
characterize male courtship and
mating behavior in many animal
species. The targets of selection
H. anomalus H. deserticola H. paradoxus may have nothing to do with
(hybrid) (hybrid) (hybrid) adaptation to environment —
indeed, they are usually
hazardous for the male to bear.
Figure 3. Three different diploid hybrid species of sunflower, each initiated by a
hybridization event between Helianthus annuus and H. petiolaris.
The reason we think sexual
Each hybrid species thrives in a distinct habitat that is stressful to both of the parental
selection is important to
species. H. paradoxus inhabits salt marshes, H. anomalus inhabits sand dunes, and H. speciation is that so many closely
deserticola inhabits desert areas. (Photos: Loren Rieseberg and Jason Rick.) related species in nature differ in
these secondary sexual
Drosophila species despite similar be effective in strengthening characters, often more so than in
environmental pressures, or might premating isolation further, other traits. A classic example is
divergent selection have played a favoring parents that avoid the Haplochromine cichlids of
role? Further research will matings that produce inferior Lake Victoria. Although they have
hopefully be able to answer this hybrid offspring. This process, diversified into many ecologically
question. known as reinforcement, is different groups, many closely
Notably, in neither of the above thought to be important for related species are similar in
scenarios does natural selection finishing the process of speciation. ecology yet very different in male
actually favor speciation. Rather, Reinforcement leads to the coloration. There is evidence that
reproductive isolation evolves pattern whereby members of two females use color to identify
incidentally from the action of species have stronger premating males of their own species and
natural selection on ordinary traits. isolation in areas where they are that they prefer the most colorful
But everything changes when in contact than individuals from males. Taken together, these
contact between the populations, allopatric populations of similar patterns imply that sexual
now incipient species, becomes age. One example comes from selection has somehow
extensive after a period of two Drosophila species that co- contributed to the divergence in
divergence. If reproductive occur in North America. D. color, with the result that males of
isolation is incomplete, then pseudoobscura is widely each species are unattractive to
hybrids will be formed that have distributed but D. persimilis females of the other species.
reduced survival or reproductive occurs only along the Pacific The other evidence for sexual
success. At this point the coast, completely within the range selection in speciation is even
divergence built up by many of D. pseudoobscura. Male more indirect. It is based on the
generations of selection might hybrids between these two finding that animal taxa with
simply collapse in the face of gene species are sterile. As predicted apparently high levels of sexual
flow. But if gene flow is not too by reinforcement, female D. selection are often excessively
great then natural selection may pseudoobscura from the zone of species rich. For example, insect
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taxa in which females mate with of the fixation of different species. The process is facilitated
multiple males have more species advantageous mutations in males by the availability of a novel habitat
than similar-aged taxa in which and females in separated to which hybrid genotypes are
females mate only once. Multiple populations. better suited than the parents.
mating provides a larger potential Evidence of speciation by Spatial separation combined with
for sexual selection as it allows for sexual conflict comes mainly from strong selection on the new hybrid
sperm competition between males insects. For example, the eggs of population reduces gene flow from
and larger variance between female flour beetles (Tribolium the ancestral populations and can
males in reproductive success. castaneum) are preferentially bring about further reproductive
For sexual selection to drive fertilized by the sperm of males isolation as a by-product.
speciation, a mechanism is from their own population. This Sunflowers in the genus
needed for preferences and strongly suggests coevolution Helianthus provide the best known
secondary sexual traits to diverge between male and female examples of hybrid speciation
between populations. Many reproductive function, possibly without polyploidization in nature
mechanisms are possible, but the because of sexual conflict. driven in addition by strong
two most likely will sound familiar: Examples from traits other than selection. H. annuus and H.
divergent natural selection and sperm–egg compatibility are few. petiolaris have produced three
the fixation of different identifiably distinct hybrid species,
advantageous mutations under One step speciation each confined to a unique
similar sexual selection pressures. Plant speciation involves all of the environment stressful to both
Divergent natural selection can above but plants also routinely parental species (Figure 3).
drive changes in mate preferences speciate in a single step by a Experiments using artificially
between two populations if they process much rarer in animals: created hybrids have shown that
inhabit environments with polyploidization, or chromosome some hybrid genotypes have
contrasting signal transmission doubling. Production of unreduced much higher fitness than parental
properties. For example, light gametes in hybrids between two types when placed in these
quality and characteristics differ species is often the impetus, stressful environments.
between different Anolis lizard yielding a new polyploid species
habitats in the Caribbean islands, combining both parental genomes Where to next?
making some color signals easier but largely reproductively isolated Our understanding of the process
to see and others more difficult. from them by the low fertility of of speciation has increased
Experiments have demonstrated triploid offspring. The result is a greatly since Darwin first
that female Anolis lizards prefer to ‘hopeful monster,’ a new species proposed a central role for natural
mate with males whose throat represented by a single individual. selection. Much of what we now
colors transmit best in each light Its initial success is aided by the know has come from research
environment. Such divergence in ability to self-fertilize or by the conducted over the past two
preferences and signals, driven by generation of other individuals by decades. The picture emerging is
differences in light environments, repeated independent that speciation is a process that
might incidentally lead to the polyploidization events. A results from the same forces
buildup of premating isolation polyploid species may similarly responsible for most change
between populations. derive from fusion of unreduced within species: natural and sexual
Sexual conflict between males gametes from a single parent selection. Nonetheless, there are
and females produces the setting species, without hybridization. still many areas that require
for the second scenario. For Polyploidization is genetically the investigation.
example, adaptations that most recognizable mechanism of The ‘top down’ or phenotypic
enhance the competitive success speciation. A recent estimate approach to studying speciation
of a male’s sperm may cause suggests that 2–4% of speciation has found evidence for selection
harm to the female and a events in flowering plants involved on ordinary phenotypic characters
reduction in her fitness. Counter- polyploidization, but this is likely an shown also to underlie premating
adaptations in females in turn underestimate because repeated and postmating isolation. This
favor males with unique sperm origins of the same polyploid are approach has yielded little,
proteins that again have a not counted, and many polyploids however, about the genetic basis
competitive advantage. This in nature are not given distinct of reproductive isolation. For
coevolutionary sequence can species status by taxonomists. example, we do not know yet if
eventually lead to reproductive Selection plays an important role in species differences are based on
isolation between closely related generating ecological differences many genes of small phenotypic
populations if sperm from one between the new polyploid species effect, or if few genes of large
population incidentally becomes and its ancestors, facilitating effect are most important in
ineffective at fertilizing female persistence. causing divergence and
eggs from the other population. Hybridization can also produce reproductive isolation. This has
Sexual selection favors change new species without polyploidy, by made it difficult to pinpoint
but does not directly favor the production of novel hybrid exactly how natural selection has
divergence. Rather, divergence genotypes whose traits may lie led to divergence in most cases.
occurs as an inevitable side effect well beyond those of the parent Recent studies of speciation in
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monkeyflowers and other taxa are just 35 days, of which at least 10


helping to overcome this gap.
Correspondence are taken to reach sexual maturity
The ‘bottom up’ or genetic (Figure 1B). This provides the
approach to studying speciation species with a remarkable three-
has hunted down genes Shortest recorded week window in which to
responsible for premating and
postmating isolation, and then
vertebrate reproduce and contribute to the
next generation.
shown that the gene sequences lifespan found in a Already constrained by time, the
exhibit signatures of recent lifetime fecundity of E. sigillata is
selection. But this approach has coral reef fish further restricted by small adult
told us little about the nature of body sizes of 11–20 mm, limiting
that selection. Is selection the number of eggs a female can
divergent or has divergence Martial Depczynski and produce. Yet pygmy gobies are an
occurred under uniform selection? David R. Bellwood incredibly successful group,
Was selection in response to numbering some 70 species with
environmental differences? Was it Extreme short lifespans are of a geographic distribution
natural or sexual selection? interest because they mark encompassing reefs across the
Finally, we still know little about current evolutionary boundaries Indian and Pacific Oceans [1]. To
how mate preferences evolve and biological limits within which investigate lifetime fecundity, we
within and between populations life’s essential tasks must be bred pygmy gobies in captivity.
during the process of speciation. successfully accomplished. Here Females were able to spawn
Sexual selection by mate choice we document the remarkable successive clutches of 108–163
might be a near-universal process eight week lifespan of the coral eggs (egg size 0.75 x 0.55 mm)
in speciation, but what drives the reef pygmy goby Eviota sigillata within an 11–17 day period,
divergence of mate preferences to [1] (Figure 1A): the shortest suggesting that females have the
begin with? recorded lifespan for any potential to produce just three
Speciation study is in the midst vertebrate. Coral reef pygmy clutches in a lifetime — a little
of a surge of research effort, and gobies spend their first three over 400 eggs. Given that larval
part of the reason is that answers weeks as larvae in the open ocean mortality in reef fishes typically
to many of these questions before undergoing metamorphosis exceeds 95% [3], high larval
appear at last to be within reach. and returning to settle on the reef, survivorship is critical for this
We expect that a combination of where they mature within 1–2 species, and males fan and guard
phenotypic and genetic weeks and have a maximum adult their eggs until hatching, a
approaches will soon close the lifespan of just three and a half reproductive strategy that greatly
gap between the genes and the weeks. enhances offspring survivorship
mechanisms of selection, and The rapid transition from larvae [4]. With an average generation
yield a fuller account of how most to settlement and then maturity is time of just 49 days, E. sigillata
species in nature have formed. recorded in the calcareous may produce up to 7.4
‘earstones’ (otoliths) of fishes by generations per year.
Further reading the deposition of periodic For small species living in
Coyne, J.A., and Orr, H.A. (2004).
Speciation, (Sunderland, MA: concentric rings; these provide not ecological settings where high
Sinauer). only a sensitive record of time but extrinsic mortality rates exist,
Orr, H.A., Masly, J.P., and Presgraves, a chronological ‘black box’ which evolution often favors a ‘live fast,
D.C. (2004). Speciation genes. Curr. imprints the age at which die young’ stratagem where rapid
Opin. Genet. Dev. 14, 675–679.
Panhuis, T.M., Butlin, R., Zuk, M., and important events take place [2]. growth and maturation are favored
Tregenza, T. (2001). Sexual Each day, pygmy gobies lay down [5,6], presumably as compensation
selection and speciation. Trends a new ring in their otoliths, much for reduced life expectancy. For
Ecol. Evol. 16, 364–371. as a tree does for each year. We example, the vertebrate that
Rieseberg, L.H. (1997). Hybrid origins
of plant species. Annu. Rev. Ecol. collected 319 E. sigillata previously had the shortest
Syst. 28, 359–389. specimens from the Great Barrier recorded lifespan and for which
Schluter, D. (2000). The Ecology of Reef over both summer and winter ageing data are available — the
Adaptive Radiation, (Oxford: periods. Age was determined after Turquoise killifish, Notobranchius
Oxford University Press).
Servedio, M.R., and Noor, M.A.F. validation of daily otolith ring furzeri — inhabits seasonal rain
(2003). The role of reinforcement in deposition, and sexual maturity pools in equatorial Africa and must
speciation: theory and data. Annu. status identified using histological complete its reproductive cycle
Rev. Ecol. Evol. Syst. 34, 339–364. techniques. A settlement ‘check’ before these pools disappear [7].
Turelli, M., Barton, N.H., and Coyne,
J.A. (2001). Theory and speciation. mark in the otolith at 23–27 days Under laboratory conditions N.
Trends Ecol. Evol. 16, 330–343. marked the transition from open furzeri survives for only 12 weeks.
ocean larvae to settlement on the Interestingly, recorded extremes in
Zoology Department and Biodiversity reef. Analyses of the largest vertebrate life history traits, such
Research Centre, University of British
individuals showed that E. sigillata as the smallest [8] and earliest
Columbia, Vancouver, British Columbia,
Canada, V6T 1Z4. has a maximum total lifespan of 59 maturing [9] vertebrates, are also
E-mail: albert@zoology.ubc.ca, days, with a maximum post- found in coral reef fish species.
schluter@zoology.ubc.ca settlement lifespan on the reef of Despite the prevalence of such life

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