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Laurie C Alexander, University of Maryland, College Park, Maryland, USA . Stream Biota
Margaret A Palmer, University of Maryland, College Park, Maryland, USA . Factors Controlling Community Structure
. Summary
Streams and rivers are inhabited by diverse communities of fish, insects, crustaceans and
other organisms that have adapted to the physical and chemical conditions found in
running water environments. The assemblage of species found in any particular stream is
not random: it is determined by many current and historical factors, including regional
environmental conditions, species interactions, evolutionary processes and human
activities. All of these factors interact in complex ways to create the observed species
diversity, abundance and composition in stream and river communities.
Introduction
communities because of their small size. Traditional
Communities are not haphazard groupings of species. methods of classification and identification depend on
Many large-and small-scale factors affect the species morphological features that are difficult to see in single-
composition of stream communities, and no single factor celled organisms. However, new molecular methods of
provides a complete explanation for the observed patterns genetic identification and characterization are contribut-
of community structure in nature. Patterns of community ing to our understanding of microbial diversity, speciation
structure provide insights into the origin and maintenance and community structure.
of biological diversity in freshwater streams, and into An easily observed part of the stream microbial
stream ecological function. We describe the major groups community is the ‘slime’ or biofilm that forms on the
of stream biota, the key factors that shape stream surfaces of submerged rocks, wood, soils, leaves and
community structure, and the scales at which these factors plants. Although it appears amorphous, this biofilm is a
interact. We also discuss some effects of human activities highly structured community of aerobic and anaerobic
on stream communities, and provide examples to illustrate bacteria, fungi, algae (primarily diatoms and cyanobacter-
how physical (abiotic) or biological (biotic) factors interact ia), and small protists, bound together in a polysaccharide
to change the species composition of a stream. matrix secreted by individual organisms.
The meiofauna are defined as those organisms that will
pass through a 1 mm mesh size but are retained by a 40 mm
mesh size. They may reach abundances as high as 106 per
Stream Biota square metre of streambed and include representatives of a
large number of invertebrate classes as well as the larger
There are over a hundred thousand species of stream protists. Common stream meiofauna include: rotifers,
organisms described to date and probably many more microcrustaceans (cladocerans, copepods, ostracods),
undescribed. A convenient way to discuss stream biota is larval insects, oligochaetes and nematodes. Permanent
by grouping them according to their size: microbes (40 meiofauna spend their entire lives within the size range of
micrometres or less in size), meiofauna (up to a millimetre meiofauna (e.g. copepods) while temporary meiofauna
in size), and the larger macrofauna. These groupings do not spend only their early life stages as members of the
imply homogeneity in lifestyles, feeding modes, or even meiofauna (e.g. early instar midges). Stream meiofauna are
locomotion – indeed diversity within each of these three an important part of the food web – they consume
groups is as great as among the groups. microbes and other meiofauna, and act as a food source for
larger stream predators, including fish, freshwater crusta-
ceans, and insects.
Microbes and meiofauna Members of both groups may live in the water column
(planktonic), the substrate surface (benthic), substrates
Microbes and meiofauna are the most abundant and
beneath the streambed (hyporheic), or in or on sediments
diverse groups of organisms living in freshwater ecosys-
and vegetation along the stream margins (riparian).
tems. One cubic centimetre of stream water contains up to
Stream microbes include the bacteria, fungi, algae and
109 bacteria alone. Compared with larger organisms, little
cyanobacteria (‘blue-green algae’). Single-celled, silica-
is known about the species composition of microbial
ENCYCLOPEDIA OF LIFE SCIENCES © 2002, John Wiley & Sons, Ltd. www.els.net 1
Stream and River Community Structure
encased diatoms and dinoflagellates are usually grouped Table 1 Local species richness of freshwater stream biota.
with the algae because of their plant-like attributes, Values are estimates of the maximum number of species
especially their ability to conduct photosynthesis. expected in a single reach based on published data for
temperate streams
Macroinvertebrates
The major macroinvertebrate groups living in freshwater microbes. Thus aquatic insects form an important link
streams are insects (mayflies, stoneflies, dragonflies, caddis between aquatic and terrestrial ecosystems, as well as an
flies, aquatic beetles, true flies – including midges, important link between the microbes and the larger
mosquitoes and black flies – true bugs, dobsonflies and predators.
alderflies), freshwater crustaceans (e.g. crayfish, freshwater In recent years, aquatic macroinvertebrates, especially
shrimp, amphipods and isopods), molluscs (snails and insects, have become important as bioindicators of water
bivalves – freshwater clams and mussels), oligochaetes quality and stream health. The morphology, physiology
(segmented worms), leeches, water mites, and turbellaria and behaviour of different taxa are sufficiently diverse that
(flatworms). macroinvertebrate community structure reveals much
The aquatic insects are a diverse group (Table 1) and are about environmental conditions. Aquatic insect species
often the most abundant and conspicuous species found in are adapted to a wide range of flow regimes, water
streams. In most cases, aquatic insect larvae and nymphs conditions, nutrient levels, temperature regimes, and in-
develop underwater, then emerge from the stream for a stream habitats, so changes in their community structure
terrestrial adult stage. The terrestrial adult stage is often can help us detect changes in environmental conditions.
shorter than the aquatic immature stage, and is important For example, the mayflies (order Ephemeroptera), stone-
for dispersal and finding suitable mates. Insects are an flies (Plecoptera) and caddis flies (Trichoptera), collectively
important food source for other animals both underwater referred to ‘EPT taxa’, are known to be intolerant to
(e.g. fish) and on land (e.g. birds, spiders). Insects also nutrient enrichment like that caused by release of sewage,
contribute to the processing of allochthonous inputs fertilizers, or farm wastes into a stream. Members of other
(leaves, wood and other plant materials that fall into groups, including oligochaetes (worms) and some flies (e.g.
streams) by mechanically breaking them into smaller family Chironomidae or midges), are more tolerant of
particles that can be more efficiently processed by stream these conditions. So a shift in community structure such
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Stream and River Community Structure
that EPT taxa are replaced by midges might indicate Many species we may never expect to find in a given stream
elevated levels of organic pollution. New research into the system simply because they cannot survive the rigours of
relationships between environmental conditions and the environment. However, even if an organism fully
stream invertebrate community structure is seeking ways adapted to these conditions could occur in a catchment, we
to improve the use of these organisms in stream monitoring may not find it there, because final composition of stream
programmes. communities is determined by a whole host of second-
order factors including local habitat types, food avail-
Vertebrates ability, predation and competition (Figure 1).
Abiotic
magnitude, frequency
growth; catadromous fish such as eels spawn in the sea but
migrate into freshwater streams for development. The
natural connectivity of stream networks has been inter-
rupted in hundreds of thousands of streams by the building °C, O2, pH
extremes
of impoundments for human purposes (e.g. drinking water
reservoirs, hydroelectric power, flood control, recreation).
The effect of impoundments on fish community structure
and dispersal is a major concern of conservationists and Substrate
size, heterogeneity
environmental agencies.
Habitat
Factors Controlling Community availability, diversity
Biotic
Structure
Life in streams and rivers is affected by the characteristics
Food
of the landscapes through which they flow. Over long availability, diversity
periods of time, landforms built up by sedimentation and
geological activity are eroded by processes of weathering Competition, predation
and the movement of glaciers and water. The complex intensity, frequency
topography and underlying geology of the resulting
landscapes determine how precipitation falling on Earth Figure 1 Factors controlling the community structure of stream and
will accumulate to form the channelized flows of water in riverine communities. Factors are shown hierarchically in terms of general
which stream organisms live. Climate, water chemistry, importance; however, factors do interact and take on different levels of
importance depending on the regional and local context. For example,
local geology (e.g. soils, channel size, type of bottom flood or drought magnitude may determine which species colonize an
substrates), and flow act as first-order constraints to area, but if temperatures exceed their tolerances or the bottom substrate is
determine which taxa we can expect to find in a catchment. too silty for them to feed, they may be absent.
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Stream and River Community Structure
constitutes a large percentage of flow, stream water which together define a stream’s flow regime. These
temperatures may vary as little as 1–28C year round, parameters are largely determined by regional differences
making them almost completely independent of air in seasonal patterns of precipitation, connectivity of
temperature. stream channels to sources of groundwater sources, basin
Stability and predictability of water temperature is topography, and terrestrial vegetation in the riparian zone.
important to stream biota because the life cycles of some Discharge is of great importance to stream plants and
organisms are linked to seasonal cycles, and even very animals, which must adapt to the forces of current. Current
small changes in stream temperature can trigger events velocity is perhaps the single most important physical
such as initiation of mating behaviours, hatching of eggs, factor in shaping the structure of stream communities. In
or emergence of terrestrial adults. Like all biota, stream addition to the obvious effect of dislodgement, forces
organisms have thermal and chemical tolerances. Some associated with velocity affect the amount and type of
(e.g. the midge family, Chironomidae) are tolerant of wide stream habitat available for colonization by stream
ranges while others can only tolerate very narrow ranges communities by determining (a) the size and arrangement
(trout will generally not be found if the temperature of substrate particles; (b) the rate at which nutrients and
exceeds 208C, and cannot survive above 258C). Some particulate carbon sources are transported though a
insects have larger body size and fewer generations per year stream; (c) in-stream movement of individual animals,
in colder streams compared with warmer streams. In one including dispersal, migration, and drift; (d) rate of bank
mayfly species (Ephemerella ignita), the percentage of eggs erosion and channel shape; and (e) the availability of
that hatch drops from 90% at 108C to about 40% at 208C. dissolved oxygen (DO). Organisms that depend on passive
Streams vary immensely in the chemical composition of diffusion of DO across gills (e.g. fish, mayflies) or through
their waters, which reflect the environmental conditions of their body walls (e.g. chironomids, aquatic worms), and
the surrounding landscapes. Variables of greatest impor- organisms that filter-feed (e.g. black flies, net-building
tance to stream biota include (a) pH; (b) water hardness; (c) caddis flies), depend on fast flow for survival. Other
nutrient level, measured as several nitrogen-and phos- organisms that are not well adapted to resist the forces of
phorus-based compounds; (d) dissolved gases, especially flow (e.g. adult beetles, meiofauna) require slower flow or
carbon dioxide and oxygen; (e) dissolved major ions, protective refuge on plants, wood, or within the streambed
including Ca2 1 , Na 1 , Mg 1 ; (f) suspended inorganic and may be washed downstream in periods of flood.
elements, including iron, aluminium and silicon. In Discharge is the product of baseflow from groundwater
general, these factors are most influential at their extremes. sources (which moves underground into stream channels)
For example, when waters are extremely low in oxygen or and overland flow from precipitation or snowmelt. Over-
very acidic, species may be unable to survive. Below the land flow and sedimentation into streams are reduced by
tolerance limits, there are, however, gradients in species vegetation, which changes stream conditions in four
composition and diversity in response to some chemical important ways: (a) plants slow runoff by intercepting
factors. For example, species richness and diversity have precipitation and physically obstructing overland flow, so
been shown to decrease with pH. Species composition may the physical impact of floods on stream organisms is
also be affected – certain invertebrates are absent from reduced; (b) the soil bacteria and fungi associated with
lower pH streams (mayflies, molluscs) whereas others may terrestrial plants alter the chemical composition of runoff
be well represented (black flies, stoneflies). Fish are very in some cases, significantly cleansing the water (e.g. of
sensitive to low pH, especially in combination with excess nitrogen); (c) vegetation reduces the rate at which
elevated aluminium levels. Acid mining drainage streams weathering of terrestrial rocks occurs or soil erosion
– where the pH is extremely low – are largely depauparate occurs; and (d) by slowing runoff, riparian vegetation
of fauna, and may have a community consisting of just a reduces the temperature of water that enters the stream.
few acid-tolerant algal species. It is also important to emphasize that some level of
flooding is normal in streams and rivers and without this,
species composition shifts towards more lentic (low or no
Flow and substrate characteristics flow) adapted species. Some ecologists have found
evidence that species richness of stream macroinverte-
In undisturbed areas, climatic factors (cycles of precipita- brates may be highest when there is moderate but not
tion, sunlight and temperature) interacting with the extreme or zero flow variability (the intermediate dis-
physical properties of the catchment (altitude, stream turbance hypothesis). This hypothesis states that species
gradient, underlying geology, hydrologic soil type, and richness is increased by intermediate levels of flooding
vegetation cover) dominate the large-scale factors that because when flow is constant, those species best adapted
affect stream community structure. Flow parameters of (i.e. with highest reproductive and survival rates) to the
greatest importance to stream organisms are the levels of particular flow level will out compete other species,
stream discharge (volume of water and its rate of flow whereas when flow is extremely variable, few species will
through a channel), flood frequency and predictability, be able to survive the extremes. Furthermore, research has
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Stream and River Community Structure
shown that the organisms have adapted over evolutionary phytes, and many different sizes of bottom substrates (e.g.
time to particular flood frequencies and predictabilities. cobble, boulders, sand) increase the number of habitat
The life cycles of many stream organisms are synchronized types and food niches available to fauna. The presence of
with annual flood or drought cycles, so that hatching eggs wood from adjacent riparian vegetation seems particularly
and small fry or larvae can develop during periods of important to fish and insect diversity. Wood along with
slower flow or in moist streambeds. One of the major large boulders helps stabilize the channel and provides
impacts of human activities on streams is alteration of refugia for fish and invertebrates during floods. Wood and
water flow in streams and rivers (e.g. by dams or other land the decaying leaves often trapped on the wood (‘woody
use changes) and thus there is a move around the world to debris dams’) provide rich resources for biofilm develop-
restore natural flow regimes. ment, which in turn supports a large number of meiofauna
and macrofauna, including fish. For this reason, debris
dams are considered biological ‘hotspots’ in streams – total
Local habitat and faunal movements production is high, community structure is complex with
many feeding groups present (algal and microbial grazers,
Some of the most important factors controlling commu- leaf shredders, predators) (Figure 2).
nity structure in streams are those relating to local habitat – Dispersal abilities of fauna often determine whether or
not only habitat quality but also the number of habitat not they will be present in a particular stream. If the stream
types (habitat diversity or heterogeneity), their stability, has frequent, unpredictable floods (as in urban settings,
and their arrangement on the streambed. In general, for where impervious surfaces produce flood-levels of runoff
both fish and stream invertebrates, species abundance and with each heavy rain), only those taxa that broadly disperse
diversity increase as habitat heterogeneity increases. The and rapidly colonize will be found. This includes insects
presence of woody snags, overhanging banks, macro-
Figure 2 Wood that falls into streams and traps leaves and other organic material supports biologically productive and diverse biotic assemblages. The
fauna live both on and in the wood, as well as on the biofilm that covers submerged pieces.
(a) Microbes and meiofauna: http://www.microscopy-uk.org.uk/mag/wimsmall/smal3.html
(b) Elmidae (adult riffle beetle): http://entweb.clemson.edu/museum/misc/aqua/aqua22.htm
(c) Aeshnidae (dragonfly nymph): http://twri.tamu.edu/
(d) Hydropsychidea (caddisfly larvae): http://waterknowledge.colostate.edu/arctopsy.htm
(e) Simuliidae (blackfly larvae): http://www.fish.washington.edu/naturemapping/water/1invert.html
(f) Pteronarcyidae (stonefly nymph): http://waterknowledge.colostate.edu/pteronar.htm
(g) Peltoperlidae (stonefly nymph): http://www.dec.state.ny.us/website/dow/stream/plefamilypageone.htm
(h) Tipulidae (crane fly larva): http://www.chebucto.ns.ca/Science/SWCS/ZOOBENTH/tipulida.html
(i) Ephemerellidae (mayfly nymph): http://www.wlu.ca/ wwwbiol/bio305/Database/Ephemerella.htm
5
Stream and River Community Structure
with strongly dispersing aerial adults, particularly those tion with the complex green algal communities observed in
that feed as adults and spend longer times in flight. Those autochthonous streambeds. The biofilm community in-
fauna with a strictly benthic lifestyle (e.g. many crustacea) corporates algae, trapped detritus and other organic
will have a tough time surviving in such settings. At smaller materials into the polysaccharide matrix, which is grazed
local scales (e.g. a particular pool or riffle) the community and fed upon by many larger stream animals. Together
composition at a point in time is greatly influenced by local these two interrelated communities form an important
movements. While fish may move around to select food source called periphyton or aufwuchs. The dominant
preferred habitats, many stream organisms are at the feeding guilds in such streams would be ‘scrapers’ and
whims of currents and may be swept away when they move ‘grazers’, which feed on attached periphyton. These guilds
to the tops of stones to feed. For this reason, communities include several families of Ephemeroptera, Trichoptera,
dominated by strong swimmers with habitat preferences or Diptera and Coleoptera, and scraping algivorous fish such
immobile organisms that can remain in their preferred as the stoneroller Campostoma.
habitat will exhibit more predictable community structure. In many other streams, however, primary production is
In these cases, we can reasonably predict what species will limited by low sunlight or by fish and invertebrate grazing.
be found, based on habitat characteristics (Figure 3), In these streams the food web is supported by external
particularly if the flow is low or highly predictable (e.g. (allochthonous) carbon sources, especially the annual leaf-
has regular spring floods and summer baseflows). Fauna fall from deciduous trees. For example, a small, forested
that have high dispersal rates but poor control of where stream shaded by a closed canopy of deciduous trees would
they move (e.g. passive dispersers that drift with the flow) probably have a detritus-based food web dominated by
may exhibit quite unpredictable community structure, ‘shredders’, which break down coarse particulate organic
particularly in streams that have extremely flashy or matter (CPOM), and ‘collectors’, which process fine
sporadic flow regimes. particulate organic matter (FPOM), as well as by their
predators. The shredders include families of Plecoptera,
Trichoptera, Crustacea, Diptera and Gastropoda; and the
Food availability collectors include families of Diptera and Ephemeroptera.
All ecosystems require a continual influx of energy to Predators might include invertebrate-feeding fish, such as
function. Lotic ecosystems are sustained by energy from trout, as well as predaceous Plecoptera, Trichoptera,
two sources: solar radiation, which fuels in-stream primary Diptera and Crustacea. Fungi and bacteria that break
production; and stored energy in the form of nonliving down the leaf material also act as food for higher trophic
organic matter (e.g. leaves, wood, fruit, soil particulates, levels, including insects, molluscs and grazing fish.
dissolved nutrients) transported into the stream from other
ecosystems by wind, runoff, gravity and groundwater.
The relative contribution of each energy source affects Biotic interactions
the food base and structure of the stream’s food web. In
streams with abundant sunlight, primary producers such Predation and competition are known to influence com-
as algae, cyanobacteria, diatoms and dinoflagellates form munity structure in virtually all ecosystems, and streams
the lowest layer of the stream food web. Biofilm microbes are no exception. While biotic interactions may be less
and meiofauna discussed earlier also live in close associa- important in structuring communities if physical condi-
tions are extremely harsh (e.g. if there are unpredictable
Flashy, flash floods), they are considered important determinants
unpredictable Stochastic, temporally of species composition and relative abundance in most
variable communities running-water systems. For example, fish predators may
Flow regime
6
Stream and River Community Structure
influencing the structure of the entire community by a worked together to create a regional species pool of
series of trophic interactions) has become a classic study potential stream community members, from which local
among ecologists. habitat conditions, species interactions, and dispersal
Community structure in streams may also be influenced interact to determine which of those species will be able
by direct competitive interactions such as when larger trout to colonize a given stream.
actively displace smaller species from the best feeding Some factors regulating stream community structure
areas, or when caddis flies battle for the best rock upon can be predicted given adequate knowledge of environ-
which to live and commence filter-feeding. A few field mental conditions (e.g. loss of species with stream
studies in which individuals have been removed from a acidification), biotic factors (e.g. prey population explo-
stream have provided evidence that competition for food sion and possible trophic cascade following elimination of
may be strong among grazing insects. Declines in stream a predator), or their interaction (e.g. seasonal cycles of
insect populations have also been shown to be related to species replacement). Other important regulators of
large-scale outbreaks of parasites (e.g. a host-specific community structure are not predictable including sto-
protozoan that infects caddis flies). Such parasites may chastic events (e.g. flash floods caused by hurricanes) or
act as important regulators of community structure if they series of events (e.g. genetic changes interacting with
alter the population cycles of abundant or trophically environmental factors), and the side effects of capricious
important community members. human behaviour (e.g. introduction of invasive species,
fragmentation and destruction of essential habitats).