Scribd Logo
Upload

Welcome to Scribd!

  • CT 4 (Cse-115) T1 L

    Uploaded by

    Meherunnesa Tania
    2 views2 pages
    The document contains instructions for a 35-minute class test worth 15 marks. Students are asked to define mutation and describe different types (3 marks). They are then given 4 keywords and instructed to: a) make a keyword tree for genome indexing, b) construct a suffix tree for the first keyword, and c) build a Burrows-Wheeler transform index for the fourth keyword (12 marks total). The test instructions are repeated with the order of the first 3 keywords changed between repetitions.

    Original Description:

    Original Title

    CT_4(CSE-115)T1_L

    Copyright

    © © All Rights Reserved

    Available Formats

    DOC, PDF, TXT or read online from Scribd

    Did you find this document useful?

    Is this content inappropriate?

    Report this Document
    The document contains instructions for a 35-minute class test worth 15 marks. Students are asked to define mutation and describe different types (3 marks). They are then given 4 keywords and instructed to: a) make a keyword tree for genome indexing, b) construct a suffix tree for the first keyword, and c) build a Burrows-Wheeler transform index for the fourth keyword (12 marks total). The test instructions are repeated with the order of the first 3 keywords changed between repetitions.

    Copyright:

    © All Rights Reserved
    Download as DOC, PDF, TXT or read online from Scribd
    Flag for inappropriate content
    2 views2 pages

    CT 4 (Cse-115) T1 L

    Uploaded by

    Meherunnesa Tania
    The document contains instructions for a 35-minute class test worth 15 marks. Students are asked to define mutation and describe different types (3 marks). They are then given 4 keywords and instructed to: a) make a keyword tree for genome indexing, b) construct a suffix tree for the first keyword, and c) build a Burrows-Wheeler transform index for the fourth keyword (12 marks total). The test instructions are repeated with the order of the first 3 keywords changed between repetitions.

    Copyright:

    © All Rights Reserved
    Download as DOC, PDF, TXT or read online from Scribd
    Flag for inappropriate content
    of 2

    Course Code: CSE-115; Course Title: Introduction to Biology and Chemistry for Computation

    Section: L
    Time: 35 Minutes Class Test-4 Marks : 15
    1. What is Mutation? Describe about different types of Mutation? 3
    2. Keywords : 3X4 =12
    i) ATTACGT
    Ii) ATCGTTAG
    Iii) TAGC
    Iv) TCGATAC
    a)For Genome Indexing make a keyword tree for the given keywords.
    b)Make a Suffix tree for the given first keyword.
    c)Using Burrows Wheeler Transform make genome index for the given fourth keyword.

    Course Code: CSE-115; Course Title: Introduction to Biology and Chemistry for Computation
    Section: L
    Time: 35 Minutes Class Test-4 Marks : 15
    1. What is Mutation? Describe about different types of Mutation? 3
    2. Keywords : 3X4 =12
    ii) ATTACGT
    Ii) ATCGTTAG
    Iii) TAGC
    Iv) TCGATAC
    a)For Genome Indexing make a keyword tree for the given keywords.
    b)Make a Suffix tree for the given first keyword.
    c)Using Burrows Wheeler Transform make genome index for the given fourth keyword.

    Course Code: CSE-115; Course Title: Introduction to Biology and Chemistry for Computation
    Section: L
    Time: 35 Minutes Class Test-4 Marks : 15
    1. What is Mutation? Describe about different types of Mutation? 3
    2. Keywords : 3X4 =12
    iii) ATTACGT
    Ii) ATCGTTAG
    Iii) TAGC
    Iv) TCGATAC
    a)For Genome Indexing make a keyword tree for the given keywords.
    b)Make a Suffix tree for the given first keyword.
    c)Using Burrows Wheeler Transform make genome index for the given fourth keyword..

    You might also like