Professional Documents
Culture Documents
7. Aldehyde- RCHO
5 Pentane C5H12 CH3 –( CH2)3 –CH3 - drop the e of alkane and add al
CH3 – CH2 OH + [O] CH3 CHO + H2O
6 Hexane C6H14 CH3 – (CH2)4 – CH3 Ethanal
e.g. methanal/ formaldehyde HCHO
7 Heptane C7H16 CH3(CH2)5 – CH3
ethanal/ acetaldehyde CH3CHO
Methane - is the simplest alkane e.g. Butane -> Butanoic/Butyric acid CH3 – CH2 – CH2 – COOH
Alkyl – formed by removing one hydrogen form an
alkane and the name ends in -yl
e.g. CH4 methane CH3 - methyl
2. Alkene (-ene)
e.g. PROPANE - PROPENE
3. Alkyne (-yne)
e.g. ETHANE – ETHYNE
aniline
e.g. Butylamine/aminomethane CH3- CH2 – CH2 – CH2 – NH2
Biochemistry 1. Nucleus
- study of compounds, chemical reactions, and - Stores DNA; involved in the expression of genetic
molecular interactions that are involved in the information and ribosome assembly.
2. Mitochondria
production, maintenance and reproduction of living
- Powerhouse of the cell
organisms.
3. Golgi apparatus
- serve as central component of all health sciences,
- Contains stacks of flattened membrane-enclosed bodies
including microbiology, genetics, physiology, nutrition, called cisternae.
medicine, dentistry and nursing. - modify and transport proteins and lipids from the
endoplasmic reticulum (ER); production of lysosome.
Along with its ability to prevent and treat health 4. Endoplasmic reticulum
- problems comes the ability to manipulate and modify - an intricate winding membrane,
life forms. This raises a lot of moral and ethical - process, synthesize, pack, and transport products
questions and one need to recognize its peril as well as (proteins and lipid)
its promise. Rough ER - contains ribosome used by the cell to
assemble proteins.
Why do we study biochemistry? Smooth ER - doesn’t have a ribosome and produces
some of the cells lipid.
1. To familiarize ourselves with the body composition
the major classes of molecules in it. 5. Lysosome
2. To familiarize ourselves with the chemical - responsible for the intracellular digestion of material;
constituents of the living cells and with the reaction repair/breakdown worn out or excess cell parts
processes that they undergo. INORGANIC COMPOUNDS IN THE BODY
3. For the understanding and maintenance of health
(preventive medicine) and nutrition such as 1. Acids
optimum dietary intake of certain of certain - yield hydrogen ion (H+) in aqueous solution
chemicals like vitamins, amino acids, fatty acids, - “proton donor”.
water and minerals. 2. Base
4. For the effective treatment of disease. From a - yield hydroxide ions (OH-) aqueous solution
biochemical standpoint of view, all diseases are - “proton acceptor”
manifestations of abnormalities of molecules, 3. Salts
chemical reactions or chemical processes. - product of the neutralization of acid and base or
substances that will dissolved in water, dissociates
into cations and anions neither of which is H+ or OH-
Cell – basic unit structure of living organism IMPORTANCE
- act as electrolytes that transmit electrical current
Prokaryotic Cell - no nucleus, e.g. bacteria
through nerves and tissues
Eukaryotic Cell - have a nucleus - provide many essential chemical elements in
intra and extracellular fluids such as the lymph,
blood, and interstitial fluids.
Organelle – specialized cellular part that has a specific
function. 4. Water
- the most important and abundant inorganic
compounds in all living systems. It is the medium in
which nearly all of the body’s chemical reaction
takes place.
Buffers
Chemical Reactions Occurring in the Body - substances that resists a change in pH upon addition
1. Hydrolysis of small amount of acid or bases.
- union of a substance with one or more molecules - consist of mixtures of weak acids and their salts or
of water. Through hydrolysis, large molecules are weal bases and their salts.
broken down smaller and simpler form. - act as shock absorber against sudden changes in pH.
2. Condensation acidosis - reduction in pH
- a reaction where simple molecules unite with one alkalosis - increase in pH
another to from complex compound. This is the The ability to buffer of hydrogen ions is more important
basis for the formation of complex substances in to the body than the strong bases raises pH more easily
the body such as glycogen, tissue proteins and the by combining with excess H+ ions and converting it to
like. water.
3. Tautomerism THE BUFFER SYSTEM OF BLOOD:
- the intramolecular rearrangement of atoms within
a molecule leading to the formation of a new 1. Carbonic acid (H2CO3) and Bicarbonate (HCO3)
substance having properties distinctly different buffer system
from the original. Glucose and Galactose, - compensate for either an excess or shortage of H+.
methylation-demethylation, deamination,
decarboxylation and stereoisomerism. - the most important buffer for plasma and is
4. Oxidation present in high concentration. I
- may be: - a prime physiologic importance in the
Aerobic if it takes place in the presence of free oxidation. maintenance of acid-base balance of the
Anaerobic if it takes place in the absence of oxygen. extracellular fluid and keeping blood pH within
5. Reduction normal limit and acts cooperatively with other
- is the reverse of oxidation. It is a simultaneous and buffer.
corresponding reaction to oxidation. It may be 2. Protein buffer system
brought about either by: - helps maintain the acidity in and around the cell.
a. Loss of oxygen Hemoglobin makes an excellent buffer by binding
b. Gain by hydrogen or electrons. the small amount of acid in the blood, before they
alter the pH of the blood.
Electrolytes 3. Phosphate buffer
- are substances that when dissolved in water - acts as anions in intra and extracellular fluid by
dissociates into charged particles called ions. raising, the plasma pH through excretion of H3PO, by
kidney.
Cations - positively charged ions
Anions - negatively charged ions
Importance of Chirality
In the human body chemistry, it is found that
left handed and right handed forms of a molecule
usually elicit different responses and that our
Ordinary light can be converted to plane of
bodies can normally use only one of the two form
polarized light by passing it through a polarizer.
of a chiral compound. Sometimes both forms are
biologically active, each form giving a different
Polarizer – an instrument with lenses or filters
response; sometimes both forms elicit the same
containing special types of crystals.
response, but one form response is many times
greater than that of the other; and sometimes one
When -plane of polarized light is passed through a
of the two form is biochemically active.
solution containing single enantiomer, the -
depending on the enantiomer. The extent of
STEREOISOMERISM
rotation depends on the concentration of the
Enantiomer and Diastereomer
enantiomer as well as its identity.
Stereoisomer
Polarimeter - instruments used to measure the
- same molecular formula and structural formulas
degree of rotation of plane polarize light by
but different in the orientation of atom in space.
enantiomeric compounds.
Two major structural formulas that generate Dextrorotatory and Levorotatory Compounds:
stereoisomerism: Optically Active Compound
1. Presence of chiral center in a molecule - compound that rotates the plane of polarized
2. Structural rigidity in a molecule. light
Dextrorotatory Compound
Stereoisomer can be subdivided into two: - a chiral compound that rotates the plane of
1. Enantiomer polarized light in a clockwise direction
- molecules are non-superimposable mirror Levorotatory compound
images with each other. - a chiral compound that rotates the plane of
e.g. Left hand right handed form of molecule polarized light in a counter clockwise direction.
with a single chiral center.
2. Diaseteriomer D and L - forms - refers to the position of the
- molecule are not mirror image with each hydroxyl group (OH-). If the (OH-) group is on the
other. right side, then it is a D-series. If the (OH-) is on the
e.g. cis and trans isomer left side, then it belongs to the L-series.
Fischer’s and Haworth’s Projection Anomer - are carbohydrates that differ in the
configuration about a single carbon atom, that is at
Fischer’s Projection - is the open or planar formula carbon 1 (called the anomeric carbon atom).
for sugar. It is of two forms: Alpha and Beta forms
e.g. Alpha D Glucose has the hydroxyl group at C1
at the right hand side, Beta D Glucose has the
hydroxyl group at C1 on the left hand side.
Monosaccharide:
Classification of monosaccharide depending on
the number of carbon atom present
Epimer - are carbohydrates that differ only on the
examples
configuration about a single carbon atom. The
Triose 3 – carbon Glycraldehyde,
process of interconversion of glucose and fructose sugar Dihydroxyacetone
in the liver is known as epimerization, and is Tetroses 4-carbon sugar Erythrose
catalyzed by an enzyme epimerase. Pentose 5 - carbon Ribose,
sugar Deoxyribose
Hexoses 6 - carbon Glucose,
Example of Epimer
sugar Galactose,
Mannose,
Fructose
Heptoses 7 carbon sugar Mannoheptose
Classification of Monosaccharide
according to Functional Group
1. Aldose -monosaccharide that contains an
aldehyde functional group.
2. Ketose - monosaccharide that contains a
ketone functional group.
REACTIONS OF MONOSACCHARIDE
Chemical Reactions OF Monosaccharide Phosphate ester - form when a compound
1. Oxidation - mono and disaccharide are easily containing an (OH) group reacts with phosphoric
oxidized to sugar acids. acid (H3PO4).
a. Oxidation of aldehyde group of an aldose using 5. Fermentation - the decomposition of
weak oxidizing agent such as Tollen’s and carbohydrates brought by enzymes, yeast, bacteria
Benedict’s solution to give an aldonic acid. and other microorganism
Oxidation of an aldehyde end of glucose produces
gluconic acid. Glucose ferments in the presence of yeast, to
b. Oxidation using strong oxidizing agent. Strong produce ethyl alcohol and carbon dioxide
oxidizing agent can oxidize both the carbonyl group C6H12O6 2 C2H5OH + 2 CO2
and the primary alcohol group to produce a Glucose ethyl alcohol carbon dioxide
dicarboxylic acid. Such polyhydroxy dicarboxylic
acids are known as aldaric acid. For glucose the
oxidation product is glucaric acid.
Disaccharide - on hydrolysis will yield two simple sugar
c. Oxidation by an enzyme. Enzyme can oxidize the
C12H22O11 + H2O C6H12O6 + C6H12O6
alcohol end of an aldose such as glucose without Disaccharide Monosaccharide Monosaccharide
oxidation of the aldehyde group to produce
alduronic acid
2. Reduction to produce sugar alcohols Sucro
The carbonyl group present in a monosaccharide
(aldose or ketose) can be reduced to hydroxyl Lacto
using, hydrogen as the reducing agent. For ketose Malto
and aldoses, the product of reduction is the
corresponding polyhydroxy alcohols called alditols. Amino Sugar - sugars containing an amino group (NH2)
Example: in place of an (-OH)
The reduction of D-glucose gives D-glucitol.
D-glucitol is commonly known as sorbitol.
3. Formation of Glycoside
Glycoside - a carbohydrate in which the (-OH) is
replaced by (-OR) group.
It is the general term for monosaccharide acetal.
An acetal is produced by the reaction of hemiacetal
and alcohol. Hemiacetal is produced by the
reaction of aldehyde and an alcohol.