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Osteomyelitis, wound abscess, Septicemia and Ingestion contaminated water and poultry
gastrointestinal infections (opportunistic) Most common cause of bacterial gastroenteritis
Violet pigment can interfere with oxidase tes Guillain-Barre syndrome- autoimmune disorder
(cross-reactivity of Campylobacter Abs with the
nerve ganglia). Paralysis.
V. Laboratory Diagnosis
Feces, Stuart medium, Cary-Blair and Campy Thio
1. Thiosulfate Citrate Bile Salt Sucrose Agar
Selective and differential media for Vibrio
Campylobacter fetus subsp. fetus
Contains sucrose, Na Citrate & ox gall (bile), and
pH indicator (bromthymol blue) Immunocompromised and elderly patient
Separate Vibrio spp. from Aeromonas and Gastric, peptic and duodenal ulcers
Plesiomonas
Type B gastritis > a condition that associated
Reagent: 0.5% sodium deoxycholate primarily with stress and chemical irritants
Campylocabacter
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Campy-BAP, Skirrow’s , Butzler and CCDA
42 ̊C or 37 ̊C at 85% N2, 5% O2, and 10% CO2
S-shaped resembling “wings of seagulls”
Exhibit Darting Motility
Moist “runny” looking and spreading (C. jejuni)
Smooth, convex and tranluscent (C. fetus
Helicobacter
Skirrow’s , CHOC agar or Brucella agar with 5%
Horse RBC
42 º C at 5-10% O2, and 5-12% CO2
Multiple flagella at one pole
HAEMOPHILUS AND
OTHER FASTIDIOUS
I. HAEMOPHILUS
Non-motile and facultative anaerobic
Ferment Carbohydrates (Except for H. ducreyi)
Oxidase and Catalase Positive
Reduce Nitrates to nitrite
Obligate parasites
Requires growth factors
> Hemin/hematin (X Factor)
> Nicotinamide adenine dinucleotide (NAD or V
Factor)
ENCAPSULATED NON-
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STRAINS ENCAPSULATED
STRAINS
iii. Colony morphology
Septicemia, Septic Otitis media
H. influenzae
arthritis
Translucent, smooth and convex
Tracheitis Conjunctivitis
“Mousy” or bleach like odor in CHOC agar
Meningitis Sinusitis
Encapsulated strains are larger and mucoid
Osteomyelitis Bacteremia
H. ducreyi
Cellulitis, Pericarditis Pneumonia
Small, flat, smooth, transparent to opaque
Pneumonia, Epiglottis
Colonies can be pushed intact
Clumpy in saline
B. Haemophilus aegyptius
“Koch-Weeks bacillus” Purulent conjuctivitis “pink eye”
iv. Laboratory Identification
H. influenzae Biogroup aegyptius
a. Neufeld Reaction
BPF (Brazilian Purpuric fever)- skin lesion, sepsis, fever
> Antisera is reacted with the antigens in the capsule
making the capsule more prominent
C. Haemophilus ducreyi b. Staphylococcus Streak (Satellitism or Satellite
▪ Chancroid (soft chancre venereal disease) phenomenon)
Haemophilus is streaked with S. aureus, S. pneumoniae
Neisseria and certain yeasts
Laboratory Diagnosis
Positive: Haemophilus appear as moist, small
i. Specimen Processing and Isolation “dewdrop” colonies surrounding S.areus colonies
a. Collected by pre-moisened swab, Stuart’s or c. X and V Factor Requirement and Hemolytic
Amie’s. Patterns
b. Culture Media d. Porphyrin Test
Chocolate Agar Test for the ability of the organism to convert:
Chocolate agar with bacitracin ALA (delta-aminolevulinic acid)→ porphobilinogen
or porphyrins
Chocolate agar with 1 %IsoVitaleX for H. ducreyi
or H. aegyptius Porphyrin → Hemin
c. Incubation Porphobilinogen is detected using Kovac’s rgt.(red
color)
i. Most Haemophilus spp.
Porphyrins (+) fluoresce reddish-orange at UV light
▪ 5% to 10% CO2 at 35°C to 37°C
(360 nm)
▪ 24 to 72 hours
ii. Haemophilus ducreyi
II. HACEK Group
▪ 5% to 10% CO2 at 33°C with high humidity
1. Aggregatibacter (formerly Haemophilus)
▪ Up to 7 days aphrophilus
“foam loving” or needing high conc.of CO2
1. Small. Gram (-) coccobacilli to long filaments. May Gram Stain: Small Gram (-) coccobacilli
be encapsulated
Convex, granular and yellow with an opaque zone
2. H. ducreyi - coccobacilli that appear as “school of near the center
fish”, “railroad tracks” or “finger prints” from genital
lesions.
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Patients with infections present commonly with May produce yellow pigment; can
clinical features of fever, heart murmur, congestive
resemble colonies of E.corrodens
heart failure, and embolism
They are fastidious, facultatively anaerobic, gram-
negative bacilli and require increased CO2 for
2. Aggregatibacter (formerly Actinobacillus) growth and isolation from blood cultures.
actinomycetemcomitans
Short bacilli in pairs /chains
IV. Pasteurella
Bipolar staining “Morse Code” appearance
Systemic, pneumonic and cutaneous infection from
The isolates may require more than 24 hours for animal (often cats) bites (zoonosis)
visible growth; a distinctive “star shape with four to
six points” in the center of the colonies is often seen Coccobacilli (ovoid, filamentous or bacilli); Bipolar
at 48 hours staining
Grayish, non hemolytic, mucoid with narrow green
to brown halo around the colony
3. Cardiobacterium hominis
It is pleomorphic, nonmotile, fastidious, gram-
negative bacilli, found as normal microbiota of the V. Brucella
nose, mouth, and throat and may be present in the Brucellosis (Undulant/Malta fever)- zoonosis-
gastrointestinal tract. acquired through aerosol, percutaneous and oral
They grow slowly on SBA and CHOC agar and fail routes; Category B biological agents (high
to grow on MAC agar morbidity, low mortality)
4. Eikenella corrodens
Infections from human bites or fights (clenched fist VI. Francisella tularensis
wounds)
Strictly aerobic; require cysteine, cystine or
A member of the normal biota of the oral and bowel thiosulfate (SBA, BCYE agar, CHOC)
cavities.
Gray-white, smooth, raised colonies
Non Fermenter; Pit agar; Chlorine bleachlike odor
zoonosis (ingestion, inhalation, arthropod bite),
Non-motile, oxidase positive, asaccharolytic, highly infectious
catalase negative; yellow pigment
Tularemia (ulceroglandular, pneumonic, etc)- rabbit
fever, water rat trapper’s disease
Fermenter (dysgonic); pits agar Capacity to adhere and persist in piped water
systems
Nonhemolytic (K. denitrificans) or β-hemolytic
(K.kingae) Legionnaire’s disease- fever w/ pneumonia
(sporadic, epidemic, nosocomial)
It can grow on Neisseria selective agar and can
resemble Neisseria gonorrhoeae if the isolate does Pontiac Fever- fever w/o pneumonia
not pit the agar as many strains do.
VIII. Bordetella
III. Capnocytophaga
1. Bordetella pertussis & B. parapertussis
Periodontitis; Local infection to fulminant infection
a) FHA and Pertactin → facilitate attachment to
(septicemia) esp. In neutropenic patients
ciliated epithelial cells.
opaque, shiny; pale beige or yellowish
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b) Pertussis toxin → interferes to signal transduction.
c) Adenylate cyclase toxin → inhibits host epithelial
and immune effector cells.
d) Tracheal cytotoxin → causes ciliostasis and DNA
synthesis
Incubate at moist chamber at 35°C for ≥7 days
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Opportunistic (1-3% of all nosocomial infection,
NONFERMENTATING 2nd most commonly isolated non-fermenter);
GRAM NEGATIVE burns, trauma
Ubiquitous; found in soil, water, foodstuffs
BACILLI
1. A. baumannii
General Characteristics
A. Grow in MacConkey as colorless colonies > Saccharolytic (glucose oxidizing), nonhemolytic
B. Fail to acidify O-F Media, overlaid with mineral strains.
oil
> Purplish hue due to lactose oxidation
C. Fail to acidify TSI
D. Most isolates in Oxidase Positive > appears blue-grey (cornflower blue) center in EMB
E. Resistance to a variety of classes of
antimicrobial agents 2. A. lwoffii
B. mallei
Glanders- zoonosis affecting horses, mules,
donkeys.
Formation of nodular lesions in lungs.
Coughing, fever and release of infectious nasal
discharge.
Potential bioterrorist agent
Nonmotile; non-pigmented colonies; no distinct
odor
LABORATORY DIAGNOSIS
Triple Sugar Iron Agar (TSI)
K/K H2S-
Acetamide Utilization
Determine the ability of an organism to use
acetamide as the sole source of carbon
Indicator: Bromthymol blue (acetamide
ammonia)
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Walking pneumonia (primary atypical
CELL WALL DEFICIENT pneumonia)
ORGANISMS
Isolation always considered significant
20% pneumonia in general populations
MYCOPLASMA AND UREAPLASMA 50% in confined settings
Prisoners, college students, and military
Mycoplasma personnel
Two mycoplasma species are known human
pathogens.
Mycoplasma pneumoniae > Respiratory disease Mode of Transmission
Mycoplasma hominis > Urogenital tract disease
Spread via close contact
Mycoplasma species are the smallest self-
Aerosol droplets
replicating organisms in nature.
Incubation
2 to 3 weeks
Headache, low-grade fever, malaise, anorexia,
General Characteristics of Mycoplasma sore throat, dry cough, earaches
Do not possess cell walls Extrapulmonary complications
Sometimes referred to as CWD (cell wall
deficient)
Resistant to cell wall active antibiotics Clinical Infections of Mycoplasma hominis
Penicillins, cephalosporins
Infections of the lower urogenital tract
Bonus is that antibiotics can help reduce normal
Found in 50% of healthy patients
florae
Can cause infections of the upper urinary tract in
Slow growing
sexually active people
Fastidious
Salpingitis: inflammation of the fallopian tubes
Require cholesterol and fatty acids for growth
Pyelonephritis: infection of kidney and ducts
Pelvic inflammatory disease (PID)
Postpartum fevers
Mycoplasma
Sometimes known as pleuropneumonia-like
organism (PPLO)
o Eaton agent: from discoverer Clinical Infections of Ureaplasma urealyticum
Colonies grow with center imbedded below agar Infections of the urogenital tract
surface Normal florae of the lower urinary tract of
o Thus appear as “fried eggs” women
Transmission Significant due to infection of fetus
Direct sexual contact, during delivery, Chorioamnionitis (infection of placental
respiratory secretions, or fomites membrane)
o Very susceptible to heat and drying conditions Congenital pneumonia
Chronic lung disease in premature infants
Location of infection Meningitis of newborns with negative cultures
Epithelium of mucosal surfaces in respiratory
and urogenital tracts
Other Mycoplasma Species
Adhere tightly to epithelial cells M. genitalium
Oropharynx
Relatively uncommon for M. hominis but Has been some association with NGU, cervicitis,
common for M. pneumoniae endometriosis, and PID
Urogenital tract May lead to tubal sterility
M. hominis (~10%-50%) women Very difficult to culture, takes 2 to 3 months
Interferes with serology for other mycoplasma
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Acute immunodeficiency syndrome (AIDS)– Tetracycline
related mycoplasma
M. hominis
Synovial fluid of patients with rheumatoid
arthritis Resistant to erythromycin; use clindamycin or
Lincomycin
U. urealyticum
Specimen Collection
Resistant to clindamycin or lincomycin; use
Extremely sensitive to drying due to lack of
erythromycin
cell wall
Swabs in transport medium
Dacron polyester or calcium alginate
Trypticase soy broth
If not plated immediately, freeze specimen at –
70°C
M. hominis
Requires arginine
Turns pink
Release of ammonium (NH4) from arginine
(phenol red indicator)
THE SPIROCHETES
Plate to agar Spirochetes
A8 agar
Look for characteristic fried egg colonies of a Helical-shaped, motile, unicellular bacteria
variety of shapes and sizes
to 3.0-µm wide by 5- to 20-µm long
Diene’s or methylene blue stain
Exhibit various types of motion in liquid media
Light blue “egg white”
Free-living or survive in association with animal
Dark blue “yolk”
or human hosts
Treponema pallidum subsp. pallidum
U. urealyticum
Syphilis
Requires urea
T. pallidum other subspecies
Turns pink
Release of NH4 from urea Borrelia
Plate to A8 agar plate
Relapsing fever
Lyme disease
Treatment Leptospira
M. pneumoniae Leptospirosis
Symptoms
Borreliae
Initial phase
Helical bacteria 0.2 to 0.5 µm by 3 to 20 µm in
Fever, headache, malaise, and severe myalgia
length
Renal lesions are interstitial nephritis with
Spirals vary between 3 to 10 per organism
glomerular swelling and hyperplasia.
Less tightly coiled than leptospires
Illness lasts from less than 1 week to 3 weeks.
Late manifestations caused by host immunologic
response to infection.
Weil’s disease: severe systemic disease Relapsing fever
Jaundice, acute renal failure, hepatic failure, B. recurrentis and B. duttonii
intravascular disease Can be fatal Pediculus humanus louse-borne infection
Epidemiology
Virulence Factors
Zoonotic disease
Evade complement by acquiring and displaying
Animal workers or in rat-infested surroundings suppressive complement regulators
Dog, rats, and other rodents are principal hosts o C4b-BP
Excreted in urine o Factor H
Freshwater recreational exposure Relapses are caused by antigenic variation.
Water contaminated by urine Specific antibodies are rendered ineffective.
Can survive for months in water
Symptoms
Infection
Incubation period is 2 to 15 days.
Enters by contact with infected urine High fever (104°F) with shaking chills
Periods of 3 to 7 days
Delirium
Laboratory Diagnosis
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Severe muscle aches and pain in bones and Generally, only screen those with symptoms and
joints high-risk factors
Generally, test by serology
Antimicrobial susceptibility
Stage 3: chronic
Tetracyclines are the drugs of choice.
Death of spirochetes can cause sudden endotoxin Chronic cardiac symptoms
release (Jarisch-Herxheimer reaction). Chronic neurologic symptoms
Fever, chills, headache, myalgia Chronic arthritis (most common symptom)
Detection Treponemes
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Treponema pallidum subsp. pallidum Late latent phase: indefinite duration; sometimes
no complications ever appear
Syphilis
Detected only through serology
Treponema pallidum subsp. pertenue
Yaws
Late syphilis (tertiary)
Treponema pallidum subsp. endemicum
Late complications of syphilis involving many
Endemic syphilis organs
Treatment
Penicillin
Long-acting is preferred
Benzathine penicillin
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