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Non-self
The immune system has the capacity to distinguish between body cells (self) and
foreign materials (non-self)
All nucleated cells of the body possess unique and distinctive surface molecules that
identify it as self
These self markers are called MHC class I
The immune system will not normally react to cells bearing these genetically
determined markers
Self markers (MHC class I) are present on the surface of all nucleated body cells and
identify the cell as part of the organism
Red blood cells are not nucleated and hence do not possess the same unique self
markers as all other body cells
This means that red blood cells can be transferred between individuals
without automatically causing immune rejection
However, red blood cells do possess basic antigenic markers which limit the
capacity for transfusion
Red blood cells may possess surface glycoproteins (A and B antigens) either
independently (A or B) or in combination (AB)
Alternatively, red blood cells may possess neither surface glycoprotein
(denoted as O)
As humans produce antibodies against foreign antigens, blood transfusions are not
compatible between certain blood groups
AB blood groups can receive blood from any other type (as they already
possess both antigenic variants on their cells)
A blood groups cannot receive B blood or AB blood (as the B antigen is
foreign and will stimulate antibody production)
B blood groups cannot receive A blood or AB blood (as the A antigen is
foreign and will stimulate antibody production)
O blood groups can only receive transfusions from other O blood donor (both
antigenic variants are foreign)
Pathogenesis
Certain pathogens may cross the species barrier and be able to infect and cause
disease in a range of hosts
Diseases from animals that can be transmitted to humans are called zoonotic
diseases.
Examples of zoonotic diseases include rabies and the bubonic plague
Disease Transmission
Transmission of infectious diseases can occur via a number of distinct mechanisms:
Direct contact – the transfer of pathogens via physical association or the
exchange of body fluids
Contamination – ingestion of pathogens through food
Airborne –transfer of pathogens in the air via coughing and sneezing
Vectors – intermediary organisms that transfer pathogens without developing
disease symptoms themselves
Clonal Selection
When the body is challenged by a foreign pathogen it will respond with both a non-
specific and a specific immune reaction
Non-specific immune cells called macrophages will break down pathogens
non-selectively
A proportion of macrophages (dendritic cells) will present the antigenic
fragments of the pathogen to specific lymphocytes
Pathogens typically contain multiple distinct antigenic fragments on their surface and
hence a single pathogen is likely to stimulate several different T and B lymphocytes
to produce a variety of specific antibodies (polyclonal activation)
Antibodies
Antibodies enhances the immune system by aiding the detection and removal of
pathogens by the macrophages
The constant region of antibodies can be recognised by macrophages,
improving pathogen identification (opsonisation)
The macrophages can now eliminate pathogens more efficiently, reducing
disease symptoms
Immunity
The adaptive immune system relies on the clonal expansion of plasma cells to
produce sufficiently large numbers of antibodies
This means there is a delay between the initial exposure to a pathogen and
the production of large quantities of antibodies
If pathogens can reproduce rapidly during this delay period, they can cause
disease
Memory cells are produced to prevent this delay in subsequent exposures and
hence prevent disease symptoms
When a B lymphocyte is activated and divides to form plasma cells, a small
proportion will differentiate into memory cells
Memory cells are long living and will survive in the body for many years,
producing low levels of antibodies
If a second infection with the same pathogen occurs, memory cells will react
more vigorously to produce antibodies faster
As antibodies are produced faster, pathogen exposure no longer causes the
disease to occur and the individual is said to be immune
Allergens
Capillary permeability describes the capacity for fluids to leave the bloodstream and
migrate into the body tissue
Increased permeability leads to swelling (more fluid leaks from the blood)
and pain (swelling causes compression of nerves)
Redness, heat, swelling and localised pain are symptoms of an allergic response
Vaccination
Memory cells may not survive a lifetime and individuals may subsequently require a
booster shot to maintain immunity
Monoclonal Antibodies
Monoclonal antibodies are antibodies artificially derived from a single B cell clone
An animal is injected with an antigen and produces antigen-specific plasma
cells
The plasma cells are removed and fused with tumor cells capable of endless
divisions
The resulting hybridoma cell is capable of synthesising large quantities of
monoclonal antibody
Treatment Use
Monoclonal antibodies are commonly used to provide immune protection for
individuals who contract harmful diseases
Because the rabies virus can potentially be fatal, injecting purified antibodies
functions as an effective emergency treatment
Monoclonal antibodies can be used to target cancer cells that the body’s own
immune cells fail to recognise as harmful
Diagnostic Use
Monoclonal antibodies can be used to test for pregnancy via the presence of hCG in
urine
hCG is a hormone produced by women during foetal development and thus its
presence in urine is indicative of pregnancy
Movement Systems
The ability to move is controlled by a number of systems, including:
Skeletal system – consists of bones that act as levers and provide a structure
for the muscles to pull
Muscular system – muscles deliver the force required to move one bone in
relation to another
Nervous system – delivers signals to the muscles which cause them to
contract and create movement
Skeletons are a rigid framework that function to provide support and protection for
body organs
Skeletons can be internal (endoskeletons) or external (exoskeletons)
Skeletons provide a surface for muscle attachment and thus facilitate the movement
of an organism
Bones and exoskeletons act as levers, moving in response to muscular
contraction
Joints
Synovial joints are capsules that surround where two bones connect
Joints function to maintain structural stability by allowing certain movements
but not others
There are six main types of synovial joints that allow for different ranges of
movement, which are (in order of mobility):
Plane joints (least mobility), hinge joints, pivot joints, condyloid joints, saddle
joints, ball and socket joints (most mobility)
Muscles connect to bones via tendons and contract to provide the force required to
produce movement
Skeletal muscles exist in antagonistic pairs (when one contracts, the other relaxes)
to enable opposing movements
Opposing movements may include: flexion vs extension, abduction vs
adduction, protraction vs retraction,
Grasshoppers and praying mantises have hind legs that are specialised for jumping
The jointed exoskeleton of the hind leg is divided into 2 parts: femur and tibia
The femur and tibia are connected by two antagonistic muscles: flexor tibiae
muscle and extensor tibiae muscle
When the flexor muscle contracts, the extensor muscle relaxes and the tibia and
femur are brought closer together
This retracts the hind quarters in preparation for pushing off the ground
When the extensor muscle contracts, the flexor muscle relaxes and the tibia is
pushed away from the femur
This extends the hind quarters and causes the insect to jump
Muscle Fibres
Each individual muscle fibre has the following specialised features designed to
facilitate muscle contraction:
They are multinucleate (fibres form from the fusion of individual muscle cells
and hence have many nuclei)
They have a specialised endoplasmic reticulum (sarcoplasmic reticulum and
stores calcium ions)
They contain many tubular myofibrils
Sarcomeres
Myofibrils consist of repeating contractile units called sarcomeres, which are made of
two protein myofilaments
The thick filament (myosin) contains small protruding heads which bind to
regions of the thin filament (actin)
Movement of these two filaments relative to one another causes the
lengthening and shortening of the sarcomere
The recurring sarcomeres produce a striated pattern along the length of the muscle
fibres
The centre of the sarcomere appears darker due to the overlap of both actin
and myosin filaments (A band)
The peripheries of the sarcomere appear lighter as only actin is present in this
region (I band)
The dark A band may also contain a slightly lighter central region where only
the myosin is present (H zone)
Muscle Contraction
4. Sarcomere Shortening
The repeated reorientation of the myosin heads drags the actin filaments
along the length of the myosin
As actin filaments are anchored to Z lines, the dragging of actin pulls the Z
lines closer together, shortening the sarcomere
As the individual sarcomeres become shorter in length, the muscle fibres as a
whole contracts
State of Contraction
When muscle fibres contract, actin filaments slide along the myosin, reducing the
length of the lighter I bands
The movement of the actin filaments also reduces the width of the H zone,
however the length of A bands do not change
Excretion
Terrestrial animals have less access to water and hence must package nitrogenous
waste in less toxic forms
Mammals eliminate their nitrogenous wastes as urea, which is less toxic and
hence can be stored at higher concentrations
Reptiles and birds eliminate wastes as uric acid
Malphigian Tubes
Malpighian Tubules
Insects have a circulating fluid system called hemolymph that is comparable
to the blood system in mammals
Malpighian tubules branch off from the intestinal tract and takes in uric acid,
salt, water from the hemolymph
The tubules pass these materials into the gut to combine with digested food
water and salts are reabsorbed into the hemolymph at the hindgut, whereas
uric acid and undigested food materials are excreted via the anus
Kidney
Blood enters the kidneys via the renal artery and exits the kidneys via the
renal vein
Blood is filtered by specialised structures called nephrons which produce
urine
The urine is transported from the kidneys via the ureter
The kidney contains specialised structures called nephrons which function to filter
blood and eliminate wastes
Consequently, the composition of blood entering the kidney differs to that
exiting the kidney
Nephrons
The nephron is the functional unit of the kidney, with each nephron being comprised
of the following components:
Bowman’s capsule – part of the nephron where blood is initially filtered
Proximal convoluted tubule – folded structure connected to the Bowman’s
capsule where selective reabsorption occurs
Loop of Henle – a selectively permeable loop that descends into the medulla
and establishes a salt gradient
Distal convoluted tubule – folded structure connected to the loop of Henle
where further selective reabsorption occurs
The blood to be filtered enters the Bowman’s capsule via an afferent arteriole and
leaves the capsule via an efferent arteriole
Within the Bowman’s capsule, the blood is filtered at the glomerulus
The efferent arteriole forms a blood network called the vasa recta
Ultrafiltration
Basement Membrane
Blood is filtered by a mesh called the basement membrane, which lies between the
glomerulus and Bowman’s capsule
Glomerular blood vessels have pores and podocytes of the Bowman’s capsule
have gaps between their pedicels
Consequently, the basement membrane functions as the sole filtration barrier
within the nephron
The basement membrane is size-selective and restricts the passage of blood cells
and large proteins
Hydrostatic Pressure
Ultrafiltration involves blood being forced at high pressure against the basement
membrane, optimising filtration
This high hydrostatic pressure is created in the glomerulus by having a wide
afferent arteriole and a narrow efferent arteriole
This means it is easy for blood to enter the glomerulus, but difficult for it to exit
– increasing pressure within the glomerulus
Selective Reabsorption
There are also a large number of mitochondria within these tubule cells, as
reabsorption involves active transport
Substances are actively transported across the apical membrane (into tubular
lumen)
Substances then passively diffuse across the basolateral membrane (into
blood)
The tubules reabsorb all glucose, amino acids, along with most of the mineral
ions and water
Mineral ions actively transported by protein pumps
Glucose and amino acids are co-transported across the apical membrane with
sodium (symport)
Water follows the movement of the mineral ions passively via osmosis
Osmoregulation
Osmoregulation occurs in the medulla of the kidney and involves two key events:
Water Reabsorption
As the collecting duct passes through the medulla, the hypertonic conditions
of the medulla will draw water out by osmosis
The amount of water released from the collecting is controlled by ADH
ADH is released in response to dehydration
ADH increases the permeability of the collecting duct to water
This means less water remains in the filtrate, urine becomes concentrated
and the individual urinates less
When an individual is suitably hydrated, ADH levels decrease resulting in
more dilute urine
Water Balance
Dehydration
Dehydration is a loss of water from the body such that body fluids become
hypertonic
Individuals will experience thirst and excrete small quantities of heavily
concentrated urine
Blood pressure will drop and the heart rate will increase to compensate for
this
The individual will become lethargic
Severe cases of dehydration may cause seizures, brain damage and eventual
death
Overhydration
Overhydration is a less common occurrence that results when an over-
consumption of water makes body fluids hypotonic
Individuals will produce excessive quantities of clear urine in an effort to
remove water from the body
The hypotonic body fluids will cause cells to swell, which can lead to tissue
damage
Overhydration can lead to headaches and disrupted nerve functions in mild
cases (due to swelling of cells)
In severe cases, overhydration may lead to seizures, coma and eventual
death
Animals in arid, desert environments will need more efficient water conservation than
animals in moist, mesic environments
Hence:
Animals living in moist environments have short loops of Henle
that don’t descend deeply into the medulla (cortical nephrons)
Animals living in arid environments have long loops of Henle that descend
deeply into the medulla (juxtamedullary nephrons)
Kidney diseases
Kidney diseases are conditions which stop the kidney’s ability to filter waste products
from the blood
Urinary Analysis
Kidneys prevent the excretion of blood cells and proteins (during ultrafiltration), as
well as glucose (selective reabsorption)
Hence the presence of these materials in urine can be used as an indicator of
disease
Drugs / toxins: Many drugs pass through the body into urine and can be detected
Hemodialysis
Kidney dialysis involves the external filtering of blood in order to remove metabolic
wastes in patients with kidney failure
Kidney Transplant
Hemodialysis ensures continued blood filtering, but does not address the underlying
issue affecting kidney function
Gametogenesis
Oogenesis
Oogenesis describes the production of eggs within the ovaries
The process begins during foetal development
Oogonia cells undergo cell growth until they are large enough to undergo
meiosis (becoming primary oocytes)
The primary oocytes begin meiosis but are arrested in prophase I
The primary oocytes remain arrested in prophase I until puberty, when a girl
begins her menstrual cycle
Each month, hormone FSH will trigger the continued division of some of the
primary oocytes
These cells will complete the first meiotic division to form two cells of unequal
size
One cell retains the entirety of the cytoplasm to form a secondary oocyte,
while the other cell forms a polar body
The secondary oocyte begins the second meiotic division but is arrested in
metaphase II
The secondary oocyte is released from the ovary and enters into the oviduct
The follicular cells surrounding the oocyte form a corona radiata and function
to nourish the secondary oocyte
If the oocyte is fertilised by a sperm, chemical changes will trigger the
completion of meiosis II and the formation of another polar body (the first
polar body may also undergo a second division to form a third polar body)
Once meiosis II is complete the mature egg forms a ovum, before fusing its
nucleus with the sperm nucleus to form a zygote
Reproductive Tissue
Seminiferous Tubule
The testes are composed of seminiferous tubules which produce sperm
Each tubule is surrounded by a basement membrane which is lined by
germline epithelium
The germline epithelium will divide by mitosis to make spermatogonia which
divide by meiosis to make spermatids
The spermatids differentiate into functional spermatozoa, which are then
released into the lumen of the tubule
These developing spermatozoa are nourished by Sertoli cells
Ovary
The ovary contains follicles in various stages of development
Primordial follicles contain primary oocytes
Some of these follicles will develop each month into primary follicles and then
secondary follicles
Each cycle, one follicle will become a dominant Graafian follicle and rupture to
release the secondary oocyte
The ruptured follicle will then develop into a short-lived corpus luteum, which
secretes key ovarian hormones
Eventually the corpus luteum will degenerate to form a corpus albicans