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1
ICAR - National Academy of
Agricultural Research
4
Management, Hyderabad,
Telangana
2
ICAR-Central Research
Institute for Dryland
Abstract
Agriculture,
Hyderabad,Telangana
Climate change and its effects have become a burning issue of today's era.
The anthropogenic activities have created many impacts on environment and on
our crop plants. Crop plants are facing the problems they had never seen before.
These problems are prominently water scarcity, drought, water logging, salinity,
increasing temperature, terminal seasonal heat etc. Plant breeder's role is
becoming very important in developing crop varieties suitable for climate resilient
agriculture, understanding the genetics of novel traits, utilizing the crop
germplasm which are still on breeders' shelf, and understanding the physiology of
crops. Plant breeders can use crop germplasm, crop wild relatives, underutilized
crops, potential plants to be developed as crops to tackle the impacts of climate
change and help the farmers to feed the ever-growing population. Utilization of
novel plant breeding tools such as marker assisted selection, genomic selection,
transgenic, genome editing, allele mining etc. will augment the conventional
plant breeding of future. Accelerated crop domestication has emerged as a new
way to widen the scope of crop plants for growing demand and divergent needs
of future generations. Future of plant breeding will be supplemented with the
advancement of extensive, accurate, ef cient and non-invasive phenotyping. The
plant breeding will be assisted in future with phenomics, arti cial intelligence,
Internet of Things, Machine learning and Big data analysis.
will need to take into account various temperate zones wherein crop yields
cereals responses to climate change, are normally embarrassed to sowing
some of which might be crop-speci c time, crop varieties, nutrient
while others can be shared between availability, soil degradation and
various crops (Prasanna et al., 2013). availability of water resources. In
Since, crop abiotic stress resistance is a addition, evapo-transpiration also will
polygenic complex trait, merely multi- be altered due to global warming;
gene synergistic effects may be consequently, water productiveness
ef ciently accomplished (Wang et al., of crops may shrink in the future.
2018). Advantageous alleles, genes, Potential climate abnormalities are
and haplotypes should be identi ed coupled with global warming and
from diverse germplasm (including crops usually come across an
wild races) and introgressed in to elite augmented number of abiotic and
germplasm. For faster development biotic stresses individually as well as in
and delivery of enhanced germplasm, combinations, which signi cantly
new strategies would be necessary to in uence their growth and
combine molecular markers for productivity (Prasad et al., 2011;
accelerated breeding and Narsai et al., 2013). As climatic
development of elite germplasm changes are in all likelihood to make
using technologies such as doubled off-putting impacts on crop growth, it
haploidy, high-throughput could endanger the efforts to
phenotyping, and planting in year- accomplish domestic and global food
round nurseries for rapid generation safety (Webber et al., 2014).
breeding approaches. In this chapter,
some of these key modern techniques II.1 Abiotic Stress
and strategies for genetic Abiotic stresses are the major
enhancement in crop to offset the stresses that plants experience
impact of climate change in specially in the area of climate
agriculture are highlighted. change. Among the environmental
stresses temperature fluctuations and
II. Impact of Climate variations in rainfall spells are very
critical indicators, which have
Change on Crop distressing effects on plant growth
Production and yield. Drought, heat and their
combinatorial effects on plant growth
Climate change is a critical global are very fatal. Apart from these the
threat that's likely to effect on the ash oods, frequent high winds and
agricultural production system and in water logging are also causing severe
the end food security. It is likely to damage to the crops standing in
steer global average temperature, elds. Elevated carbon-dioxide (CO2)
rainfall pattern and elevated carbon and greenhouse gases (GHGs) are
dioxide level, which will directly affecting the crop growth by
in uence the crop growth and jeopardizing their physiological
ultimately crop productivity. Climate machinery.
change adversely affected agriculture
system across the majority of tropical
and subtropical regions in contrast to
a. Drought b. Heat
Drought is non-availability of Global average temperature has
adequate quantity of water at any accelerated by 0.8°C since the 1850s
growth stage of a crop plant so that and is projected to rise at the rate of
the maximum crop growth and yield 2 to 7°C by the end of this century
is hindered (Prasad et al., 2011). (Allison et al., 2011). Rising
Drought affects the crop growth by temperature may be a major
limiting the physiological and challenge for food safety if adaptive
metabolic process such as mineral control measures cannot be capable
absorption, rate of photosynthesis, to lessen the expected yield losses. It
transpiration, photosynthates has been predicted that temperatures
translocation, bud development, variation of ±2°C in mean growing-
owering, initiation. Drought at any season in Australia can cause up to
critical stage of plant growth may be 50% drop off in wheat yield even
detrimental to yield. The severity of without differences in rainfall (Asseng
drought is largely unpredictable and et al., 2011). It was concluded that the
it can be because of uneven rainfall loss in yield was especially accredited
pattern, poor rainfall, poor moisture to in leaf senescence as a result of
holding capacity of soil, extended temperature beyond 34°C.
evapotranspiration etc. (Fahad et al., In India, reduction in wheat yield up
2017). Various plant species at to 20 % due to an abrupt increase in
different growth stages show temperature through grain lling
different physiological and metabolic period reported by Gupta et al.
response to drought stress and deploy (2010). Maize production is more
different mechanism to tackle it. It susceptible towards uctuations in
includes reduced absorption of temperature and rainfall amongst
photosynthetic radiation, decreased staple cereals (Knox et al., 2012). In a
harvest index and impaired radiation study by Lobell et al. (2008), it was
use ef ciency (Earl and Davis, 2003). reported that, 30 % reduction in
As per the detailed analysis of data maize yield by 2030 was projected in
from 1980 to 2015, Daryanto, Wang southern Africa. The rising
and Bramely (2016) had reported a temperature may cause the change in
global reduction in yield of wheat cropping pattern around the globe.
and maize by 21 to 40 % due to Growth acceleration due to above
drought. Similarly, drought stress also average temperature causes harm to
has signi cantly decreased the yield various physiological process, less
of major grain legume crops. Drought radiation interception, less biomass
stress caused the yield decline of 26% production, etc. (Aryal et al., 2019).
during the reproductive phase
(Baroowa and Gogoi, 2014) in black c. Combined Drought and Heat
gram. Maleki et al. (2013) reported Simultaneous exposure to
that 42% reduction in grain yield drought and heat stress were found
when Soybean crop was exposed to to be more detrimental than these
drought stress at grain lling stage. stresses occurring independently at
different growth stages to crop
production (Prasad et al., 2011).
2. Crop Wild Relatives(CWR) and Plant genetic resources are the most
Climate Change valuable material for climate
(http://www.cwrdiversity.org/), challenge. Plant genetic resources are
maintained through more than 1750
3. Gateway to Genetic Resources
individual gene banks worldwide as
(http://www.genesys-pgr.org/),
shown in Table 2 (Bansal et al., 2016).
4. Global Crop Diversity Trust This table also noti es the extent of
(https://www.croptrust.org/). variability conserved in the form of
A summary of crop wild relatives of landraces, wild and advanced
some important food crops is shown research material that exists in our
in Table1 (Kaur et al., 2018). gene banks.
and allopolyploidy) can be arti cially lines can be selected (Reynolds et al.,
induced or by applying the chemical 2005). This type of breeding
colchicine which contributes to crop methodology has been successfully
improvement. Generally, the main deployed at CIMMYT resulting several
effect of polyploidy is increase in size newly released improved wheat
and genetic variability. Sudden varieties across different countries.
heritable changes i.e. mutagenesis Advanced-backcross QTL analysis
and by generation of variation (ABQA) and introgression libraries
through tissue culture i.e. somaclonal (ILs) allow for proper and effective
variation also play a crucial role in dissection of the phenotypic
creating genetic variation and these variability contributed by non-
variations are utilized in selection of commercially viable parental lines
desired genotypes with superior (Salvi et al., 2011).
characteristics and selected genotypes
Precision phenotyping is critical for
are evaluated in replicated trials,
diminishing the genotype phenotype
preferably, over locations and years to
gap particularly for quantitative traits
ascertain their superiority over the
but establishment of association
existing varieties. A new superior
between a marker and a locus
genotype is nally multiplied and
affecting a target trait. The use of
distributed for commercial
markers linked to QTLs for the target
cultivation.
trait helps to overcome the low
IV.2 Precision Phenotyping for Trait heritability that is the main problems
encountered in the conventional
Discovery
selection of quantitative traits.
Precision phenotyping is Selection of individuals based on their
generation of precise information to genetic makeup scores rather than
reduce the experimental “noise” their phenotypic features (Langridge,
introduced by uncontrolled 2005). The effectiveness of marker
environmental and experimental assisted selection breeding
variability that are relevant and approaches depends on how precisely
meaningful and required for the target traits have been surveyed
improving the selection ef ciency of phenotypically in mapping
the breeding programs for populations. In fact, a low heritability
accelerating genetic gains under the impairs the ef ciency of detecting the
conditions prevailing in farmers' presence of QTLs (Bernardo, 2004),
elds. Various alternatives are thereby increasing Type II errors (i.e.,
accessible to use the data gathered false negatives). A precise and
through phenotypic assessment of signi cant phenotyping will help in
germplasm resources (Tuberosa et al., selection, an approach that disregards
2011). Identifying parental lines QTLs identi cation and relies on the
through intensive phenotypic molecular pro ling and accurate
characterization for traits imparting phenotyping of (Bernardo and Yu,
drought resistance allows developing 2007). Proper evaluation and control
new populations where segregants of the experimental factors that
that combine drought-adaptive and lower the heritability of traits,
other desirable features of parental coupled with a wise choice of the
any trait, QTLs are identi ed (Collard selection to minimize the linkage
et al., 2005). Molecular breeding drag of donor parent (Young and
includes approaches like marker Tanksley, 1989).
assisted backcross breeding (MABB),
MARS is a breeding tool that is used
marker-assisted recurrent selection
to accumulate favourable alleles for a
(MARS) and genomic selection (GS). In
particular trait into a single genetic
MABB, a trait of interest is
background from several genomic
incorporated into a recurrent parent
regions within a single population. In
(RP) which is a superior variety except
MARS, markers identi ed for
de cient in that particular trait, from
quantitative traits are used either
a donor parent (DP) with maximum
alone or as combined selection index
recovery of the recurrent parent
that includes phenotype data for the
genome. Molecular markers have
trait (Lande and Thompson, 1990). A
been used for foreground selection to
selection index is generally de ned as
introgress the gene of interest
a numerical score obtained by
(Tanksley, 1983), for background
integrating information from all the
selection to recover the recurrent
traits associated with the dependent
parent genome and for recombinant
trait/variable (for example, yield) and
Table 6: Examples of Crop Varieties Improved for Traits Affected by Climate Change.
pattern, ooding etc. has been done dissection and mapping of underlying
to tackle the effect of climate change. gene(s) (Cobb et al., 2013).
Advancement in precision Genotyping by the next-generation
phenotyping to accurately, effectively sequencing tools has helped the plant
and ef ciently measure the plant breeders to effectively transfer the
phenotype with less cost and labor by desired QTL(s) for developing the
reducing the errors, utilizing climate resilient varieties. Trait
advanced tools and neutralizing mapping using precision
environmental factors has phenotyping, genotyping and power
tremendously helped in the trait to handle big data using advanced
computational tools has been a boon
for plant scientist nowadays in rapid and in the process of creating crops
advancement of genetic gain (Araus which are bred-by-design (Raza et al.,
et al., 2018; Chawade et al., 2019). 2019). Plant breeding for climate
Some achievement of breeding crop change is committed to develop crop
plants for offsetting the effects plant which will be completely
climate change are given in the Table modelled by the breeders. The future
5 and 6. of plant breeding for offsetting the
effect of climate change can be
VI. Conclusion and Future consolidated in following points
(www.cgiar.org).
Prospects
1. Identi cation of challenge: To
Studies on climate change and understand the effects of climate
creating ways to tackle it are the change and dug out the factors
prime concern of today's world. Many affecting the crop plants.
studies have been carried out to
2. Identi cation of key important
critically measure the impact of
traits: Understanding the key traits
climate change on several aspect of
in crop plant which contribute for
crop production, livelihood of small
the climate resilience such as root
and marginal farmers, availability of
length, root hair density etc. for
resources and impact on the human
drought tolerance.
life. Crop production in a broader
aspect has been challenged by the 3. Identi cation of germplasm:
effects of climate change such as Screening of germplasm for the
drought, waterlogging, salinity, cold, identi ed traits. Searching for new
unpredictable rain etc. With these genes and genotypes.
problems in mind and challenges, the 4. Popularising the underutilized
role of plant breeders is becoming crops which are climate resilient
more important day by day.
5. Use of genomic assisted plant
Studying the genetics of traits breeding to make crop breeding
affected by climate changes and ef cient, effective and accurate.
searching for new genes and
mechanism to develop climate 6. Utilization of phenomics tools, big
resilient crops are the prime concern data approach, Machine learning,
of plant breeders nowadays. Studies Arti cial Intelligence and Internet
on the molecular mechanism of of Things (IoT) are the future of
drought tolerance, salinity tolerance, plant breeding and they will nd
waterlogging, high temperature appropriate uses in developing
tolerance and increased CO2 level climate-smart varieties.
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