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Most lipids are fatty acids or ester of fatty acid They are soluble in non-polar solvents such as petroleum ether, benzene, chloroform Energy storage Structure of cell membranes Thermal blanket and cushion Precursors of hormones (steroids and prostaglandins) Fatty acids Neutral lipids Phospholipids and other lipids
Functions
Types:
Fatty acids
Carboxylic acid derivatives of long chain hydrocarbons Nomenclature (somewhat confusing)
General structure:
CH3
(CH2)n COOH
Fatty acids
Common fatty acids
n = 4 butyric acid (butanoic acid) n = 6 caproic acid (hexanoic acid) n = 8 caprylic acid (octanoic acid) n = 10 capric acid (decanoic acid)
Fatty acids
common FAs:
n = 12: lauric acid (n-dodecanoic acid; C12:0)
n = 14: myristic acid (n-tetradecanoic acid; C14:0) n = 16: palmitic acid (n-hexadecanoic acid; C16:0) n = 18; stearic acid (n-octadecanoic acid; C18:0) n = 20; arachidic (eicosanoic acid; C20:0) n= 22; behenic acid n = 24; lignoceric acid n = 26; cerotic acid
R
H3C
H3 C CH3
acid
(CH2)12-CO2H
(CH2)10-CO2H
chaulmoogric acid
hydnocarpic acid
PHYTANIC ACID A plant derived fatty acid with 16 carbons and branches at C 3, C7, C11 and C15. Present in dairy products and ruminant fats. A peroxisome responsible for the metabolism of phytanic acid is defective in some individuals. This leads to a disease called Refsums disease Refsums disease is characterized by peripheral polyneuropathy, cerebellar ataxia and retinitis pigmentosa
ERYTHROGENIC ACID
Fatty acids
Fatty acids can be classified either as: saturated or unsaturated according to chain length:
short chain FA: 2-4 carbon atoms medium chain FA: 6 10 carbon atoms long chain FA: 12 26 carbon atoms essential fatty acids vs those that can be biosynthesized in the body: linoleic and linolenic are two examples of essential fatty acid
Double bond is always cis in natural fatty acids. This lowers the melting point due to kink in the chain
HOOC
CH( CH 2)7COOH
10 18:1,9 or 9 18:1
H3C
2 3 4
5 6 7 8 9
10
18
CH( CH 2)7COOH
10
COOH CH3
16:1, 9 7: palmitoleic acid (cis-9-hexadecenoic acid 18:1, 9 9: oleic acid (cis-9-octadecenoic acid) 18:1, 9 9: elaidic acid (trans-9-octadecenoic acid) 22:1, 13 9: erucic acid (cis-13-docosenoic acid) 24:1, 15 9: nervonic acid (cis-15-tetracosenoic acid)
18:3;6,9,12 6 : g-linolenic acid (all cis-6,9,12-octadecatrienoic acid) 18:3; 9,12,15 3 : a-linolenic acid (all-cis-9,12,15octadecatrienoic acid) 20:4; 5,8,11,14 6: arachidonic acid (all-cis-5,8,11,14eicosatetraenoic acid)
20:5; 5,8,11,14,17 3: timnodonic acid or EPA (all-cis-5,8,11,14,17-eicosapentaenoic acid)* 22:6; 4,7,10,13,16,19 3: cervonic acid or DHA (all-cis-4,7,10,13,16,19-docosahexaenoic acid)*
Examples of oils
Olive oil from Oleo europa (olive tree) Corn oil from Zea mays Peanut oil from Arachis hypogaea Cottonseed oil from Gossypium Sesame oil from Sesamum indicum Linseed oil from Linum usitatissimum Sunflower seed oil from Helianthus annuus Rapeseed oil from Brassica rapa Coconut oil from Cocos nucifera
R'OH + RCO 2H
-H20
RCO2R'
R' R H H
Soaps
Process of formation is known as saponification
Types of soaps: Sodium soap ordinary hard soap Potassium soap soft soap (shaving soaps are potassium soaps of coconut and palm oils) Castile soap sodium soap of olive oil Green soap mixture of sodium and potassium linseed oil Transparent soap contains sucrose Floating soap contains air Calcium and magnesium soaps are very poorly water soluble (hard water contains calcium and magnesium salts these insolubilize soaps)
Lipid peroxidation
a non-enzymatic reaction catalyzed by oxygen may occur in tissues or in foods (spoilage) the hydroperoxide formed is very reactive and leads to the formation of free radicals which oxidize protein and/or DNA (causes aging and cancer) principle is also used in drying oils (linseed, tung,
Hydrogenated fats
hydrogenation leads to either saturated fats and or
trans fatty acids the purpose of hydrogenation is to make the oil/fat more stable to oxygen and temperature variation (increase shelf life) example of hydrogenated fats: Crisco, margarine
Neutral lipids
Glycerides (fats and oils) ;glycerides Glycerol CH OH
2
OH OH OH
OH CH2OH
triglycerides
GLYCERIDES
O O OH OH R O O O OH O O MONOGLYCERIDE DIGLYCERIDE R R R O O O TRIGLYCERIDE R O R O
WAXES
simple esters of fatty acids (usually saturated with long
Beeswax also includes some free alcohol and fatty acids Spermaceti contains cetyl palmitate (from whale oil) useful for Pharmaceuticals (creams/ointments; tableting and granulation) Carnauba wax from a palm tree from brazil a hard wax used on cars and boats
Spermaceti source
Bees wax
Waxes
H3C (CH2)14 CH2-OH cetyl alcohol H3C H3C (CH2)24 CH2-OH (CH2)28 CH2-OH hexacosanol triacontanol (myricyl alcohol)
Phospholipids
the major components of cell membranes
phosphoglycerides
O
phosphate
Phospholipids are generally composed of FAs, a nitrogenous base, phosphoric acid and either glycerol, inositol or sphingosine
phosphate
X = H (phosphatidic acid) - precursor to other phospholipids X = CH2-CH2-N+(CH3)3 phosphatidyl choline X = CH2-CH(COO-)NH3+ phosphatidyl serine X = CH2-CH2-NH3+ phosphatidyl ethanolamine
Phosphatidyl inositol
Sphingolipids
Based on sphingosine instead of glycerol
OH OH sphingosine NH 2
HO
NH 2 OH
Sphingomyelin (a ceramide) R HO
O NH OO P O O N(CH3)+ R' usually palmitic acid
Ether glycerophospholipids
Possess an ether linkage instead of an acyl group at the
Ether glycerophospholipids
O -O P O H2C O CH O C CH 3 O
H
CH 3 O CH 2 CH 2 N CH 3
H2C O CH O C O
CH 3 O CH 2 CH 2 N CH 3 CH 3
CH 3
-O
P O CH 2
CH 2
H
A choline plasmalogen
glycolipids
HO O NH O R' SUGAR polar head is a sugar R
GLYCOLIPIDS
Cerebrosides
Sulfatides or sulfogalactocerebrosides
Gangliosides
Have a more complex oligosaccharide attached Biological functions: cell-cell recognition; receptors for hormones
Gangliosides
complex glycosphingolipids that consist of a ceramide
backbone with 3 or more sugars esterified,one of these being a sialic acid such as N-acetylneuraminic acid common gangliosides: GM1, GM2, GM3, GD1a, GD1b, GT1a, GT1b, Gq1b
Ganglioside nomenclature
letter G refers to the name ganglioside
the subscripts M, D, T and Q indicate mono-, di-, tri,
and quatra(tetra)-sialic-containing gangliosides the numerical subscripts 1, 2, and 3 designate the carbohydrate sequence attached to ceramide
Ganglioside nomenclature
Numerical subscripts:
N-Acetyl-D-galactosamine
CH 2OH OH O OH H H OH H O H NH C CH 3 O H3C C NH CHOH CHOH CH 2OH H H O O H H OH O O CH 2OH
D-galactose
CH 2OH H O H H H OH O
D-glucose
CH 2OH O OH H H H HO H C OH H C O H C NH C C H R O CH 2
D-Galactose
O COO-
OH
A ganglioside (GM1)
Cardiolipids
O O R2 C O H2C C H2C O H O C O P OH glycerol glycerol O R1 H CH2 C OH CH2 O R4 O C O P OH glycerol O H O CH2 C CH2 O O C R3
A polyglycerol phospholipid; makes up 15% of total lipid-phosphorus content of the myocardium associated with the cell membrane Cardiolipids are antigenic and as such are used in serologic test for syphilis (Wasserman test)
Sulfolipids
also called sulfatides or cerebroside sulfates
contained in brain lipids sulfate esters of cerebrosides present in low levels in liver, lung, kidney, spleen,
also known as sphingolipidoses genetically acquired due to the deficiency or absence of a catabolic enzyme examples:
http://www.ninds.nih.gov/disorders/lipid_storage_disease
s/lipid_storage_diseases.htm
Tay-Sachs disease
a fatal disease which is due to the deficiency of hexosaminidase A activity accumulation of ganglioside GM2 in the brain of infants mental retardation, blindness, inability to swallow a cherry red spot develops on the macula (back of the the eyes) Tay-Sachs children usually die by age 5 and often sooner
Accumulation of ceramide trihexoside in kidneys of patients who are deficient in lysosomal a-galactosidase A sometimes referred to as ceramide trihexosidase Skin rash, kidney failure, pains in the lower extremities Now treated with enzyme replacement therapy: agalsidase beta (Fabrazyme)
Also known as globoid leukodystrophy Increased amount of galactocerebroside in the white matter of the brain Caused by a deficiency in the lysosomal enzyme galactocerebrosidase Caused by a deficiency of lysosomal glucocerebrosidase Increase content of glucocerebroside in the spleen and liver Erosion of long bones and pelvis Enzyme replacement therapy is available for the Type I disease (Imiglucerase or Cerezyme) Also miglustat (Zavesca) an oral drug which inhibits the enzyme glucosylceramide synthase, an essential enzyme for the synthesis of most glycosphingolipids
Gauchers disease:
Miglustat (Zavesca)
accumulation of sulfogalactocerebroside (sulfatide) in the central nervous system of patient having a deficiency of a specific sulfatase mental retardation, nerves stain yellowish-brown with cresyl violet dye (metachromasia) accumulation of ganglioside GM1 deficiency of GM1 ganglioside: b-galactosidase mental retardation, liver enlargement, skeletal involvement
Generalized gangliosidosis
Niemann-Pick disease
principal storage substance: sphingomyelin which
accumulates in reticuloendothelial cells enzyme deficiency: sphingomyelinase liver and spleen enlargement, mental retardation
Blood groups
determined by various glycolipids on RBCs
A antigens
AcN
Gal Ac N Glu-sphingosine
B antigens
H antigens
Gal
L-Fucose
Gal
NAc-Glu-sphingosine
L-Fucose
Gal
NA c--Glu-sphingosine L-Fucose
hydrophobic O
9 10 8 B 5
STEREOCHEMISTRY OF STEROIDS
CH3 H CH3 H H H H H CH3 H H CH3 H H CH3 H CH3
CH3 H HO H
CH3 OH
acetyl-coA; biosynthesis is inhibited by LDL uptake degradation: only occurs in the liver
H H HO H R O H O usually palmitate
H H
The hydroxyl at C-3 is hydrophilic; the rest of the molecule is hydrophobic; also 8 centers of asymmetry
H HO
Functions: -serves as a component of membranes of cells (increases or moderates membrane fluidity -precursor to steroid hormones -storage and transport cholesterol esters
Functions of cholesterol
serves as a component of membranes of cells
(increases or moderates membrane fluidity) precursor to steroid hormones and bile acids storage and transport cholesterol esters
O O O OO P O O X H2 0 phospholipase A 2 (enzyme that hydrolyzes at the sn-2 position - inhibited indirectly by corticosteroids) O R
COOH CH3
COX is inhibibited by prostaglandin synthase aspirin and other NSAIDs (also k nown as cyclooxygenase)
COOH
O OH PGH 2
COOH
HO PGE 2
OH
HO
OH PGF 2a
k ey mediator of inflammation
O R1
O R1
O R1
HO R1
R2 PGA O R1 PGB
R2 PGC
R2 O PGD
R2
R1
HO PGE
R2 HO PGI
R1
O R1 O R1
OH R1
R2 O PGJ O PGK
R2
O TXA
R2
HO
O TXB
R2
Functions of eicosanoids
Prostaglandins particularly PGE1 block gastric production and thus are gastric protection agents Misoprostol (Cytotec) is a stable PGE1 analog that is used to prevent ulceration by long term NSAID treatment PGE1 also has vasodilator effects
Alprostadil (PGE1) used to treat infants with
Functions of eicosanoids
PGF2a causes constriction of the uterus Carboprost; Hebamate (15-Me-PGF2a) induces abortions PGE2 is applied locally to help induce labor at term
Leukotrienes
Leukotrienes are derived from arachidonic acid via the enzyme 5-lipoxygenase which converts arachidonic acid to 5-HPETE (5-hydroperoxyeicosatetranoic acid) and subsequently by dehydration to LTA4
peptidoleukotrienes
Leukotrienes
Leukotrienes are synthesized in neutrophils, monocytes, macrophages, mast cells and keratinocytes. Also in lung, spleen, brain and heart. A mixture of LTC4, LTD4 and LTE4 was previously known as the slow-reacting substance of anaphylaxis
C5H11
S Cys Gly
(LTE4)
LEUKOTRIENE D 4 (LTD 4)
peptidoleukotrienes
Leukotrienes
Non-peptidoleuktrienes: LTA4 is formed by dehydration of 5-HPETE, and LTB4 by hydrolysis of the epoxide of LTA4
(LTA4) C5H11 OH
COOH
LEKOTRIENE B 4 (LTB4)
Zafirlukast (Accolate)
Montelukast (Singulair)
Lipid-linked proteins
Lipid-linked proteins (different from lipoproteins) lipoproteins that have lipids covalently attached to them these proteins are peripheral membrane proteins
Lipid-linked proteins
3 types are most common: Prenylated proteins
Farnesylated proteins (C15 isoprene unit) Geranylgeranylated proteins (C20 isoprene unit) Myristoylated proteins (C14) Palmitoylated proteins (C16)
Lipid-linked proteins
glycosylphosphatidylinositol-linked proteins (GPI-
linked proteins)
occur in all eukaryotes, but are particularly abundant in
parasitic protozoa located only on the exterior surface of the plasma membrane
Prenylated proteins
GPI-linked proteins
Lipoproteins
particles found in plasma that transport lipids including cholesterol lipoprotein classes
chylomicrons: take lipids from small intestine through lymph cells very low density lipoproteins (VLDL) intermediate density lipoproteins (IDL) low density lipoproteins (LDL) high density lipoproteins (HDL) Terpenes
Lipoprotein class
HDL
Density (g/mL)
1.063-1.21
Diameter (nm)
5 15
Triacylglycerol % of dry wt
8
LDL
18 28
25
21
IDL
25 - 50
18
22
31
VLDL
0.95 1.006
30 - 80
10
18
50
chylomicrons
< 0.95
100 - 500
1-2
84
Lipoprotein structure
LDL molecule
The apolipoproteins
major components of lipoproteins often referred to as aproteins classified by alphabetical designation (A thru E) the use of roman numeral suffix describes the order in which the apolipoprotein emerge froma chromatographic column responsible for recognition of particle by receptors
LIPOPROTEINS
spherical particles with a hydrophobic core (TG and
large: apoB (b-48 and B-100) atherogenic smaller: apoA-I, apoC-II, apoE
B-48 (240,000) found only in chylomicron <5 mg % B-100 (500,000) principal protein in LDL
80 100 mg %
4 7 mg % 3 8 mg % 8 15 mg % 8 10 mg % 3 6 mg %
Terpenes
simple lipids, but lack fatty acid component
formed by the combination of 2 or more molecules of 2-methyl-1,3-butadiene (isoprene) monoterpene (C-10) made up of 2 isoprene units sesquiterpene (C-15) made up of 3 isoprene units diterpene (C-20) made up of 4 isoprene units
Monoterpenes
CHO OH
limonene
citronellal
menthol
camphene
Monoterpenes are readily recognized by their characterisitic flavors and odors ( limonene in lemons, citronellal in roses and geraniums, pinene in turpentine and menthol from peppermint
Sesquiterpenes
HO
bisabolene
eudesmol
Diterpenes
OH H CH 2OH HO C O H CH 3 COOH O
phytol
gibberelic acid
H3C
CH 3
CH 3
CH 3
CH 3
All-trans-retinal
Triterpenes
HO H
squalene
lanosterol
Triterpenes are C-30 compounds are addition products of 2 sesquiterpenes; Both squalene and lanosterol are precursors of cholesterol and other steroids
Other terpenes
tetraterpenes (C-40) are not as common as mono, di, and triterpenes
include the carotenoids such as beta-carotene
(precursor of vitamin A) and lycopene found in tomatoes usually colorful compounds due to highly conjugated system
alcohol (bactoprenol) and the side chains of vitamins K, vitamin E and coenzyme Q