You are on page 1of 21

New

Phytologist Review

Tansley review
From sunlight to phytomass: on the
potential efficiency of converting solar
radiation to phyto-energy

Author for correspondence: Jeffrey S. Amthor


Jeffrey S. Amthor
Faculty of Agriculture, Food and Natural Resources (C81), University of Sydney, NSW 2006,
Tel: +61 02 8627 1050
Email: jeff.amthor@sydney.edu.au Australia

Received: 10 July 2010


Accepted: 5 September 2010

Contents

Summary 939 VII. Maintenance 949

I. Introduction 940 VIII. Substrate requirement for growth 949

II. Approach 940 IX. From sunlight to phyto-energy: potential overall efficiency 953

III. Solar radiation absorption 942 X. Assessment 955

IV. Quantum requirement for CO2 assimilation 943 Acknowledgements 955

V. Respiration 946 References 955

VI. Photosynthate mobilization and translocation 948

Summary

New Phytologist (2010) 188: 939–959 The relationship between solar radiation capture and potential plant growth is of
doi: 10.1111/j.1469-8137.2010.03505.x theoretical and practical importance. The key processes constraining the transduc-
tion of solar radiation into phyto-energy (i.e. free energy in phytomass) were
Key words: C3 ⁄ C4, efficiency, growth, main- reviewed to estimate potential solar-energy-use efficiency. Specifically, the out-
tenance, photorespiration, photosynthesis, put : input stoichiometries of photosynthesis and photorespiration in C3 and C4
respiration, solar radiation. systems, mobilization and translocation of photosynthate, and biosynthesis of
major plant biochemical constituents were evaluated. The maintenance require-
ment, an area of important uncertainty, was also considered. For a hypothetical C3
grain crop with a full canopy at 30C and 350 ppm atmospheric [CO2], theoreti-
cally potential efficiencies (based on extant plant metabolic reactions and
pathways) were estimated at c. 0.041 J J)1 incident total solar radiation, and
c. 0.092 J J)1 absorbed photosynthetically active radiation (PAR). At 20C, the

The concept for this article was developed


while the author was employed by the US
Department of Energy; it does not reflect
any US Government view or policy.

 The Author (2010) New Phytologist (2010) 188: 939–959 939


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
940 Review Tansley review Phytologist

calculated potential efficiencies increased to 0.053 and 0.118 J J)1 (incident total
radiation and absorbed PAR, respectively). Estimates for a hypothetical C4 cereal
were c. 0.051 and c. 0.114 J J)1, respectively. These values, which cannot be con-
sidered as precise, are less than some previous estimates, and the reasons for the
differences are considered. Field-based data indicate that exceptional crops may
attain a significant fraction of potential efficiency.

The amount of phyto-energy accumulated depends on


I. Introduction
the amount of solar energy captured and the efficiency of its
How much plant can be grown from a unit input of solar use (Loomis & Williams, 1963; Warren Wilson, 1967;
radiation? This question, which has broad theoretical and Monteith, 1972, 1977; Dohleman & Long, 2009). This
practical implications, has been addressed previously (e.g. review targets the efficiency – specifically, potential (maxi-
Loomis & Williams, 1963; Beadle & Long, 1985; Loomis mal) efficiency – of the conversion of solar energy to phyto-
& Amthor, 1996, 1999; Long et al., 2006; Zhu et al., energy. Emphasis is placed on C3 and C4 grain crops
2008), but remains incompletely resolved. The goal of this because of their importance to humans, the availability of
review is to synthesize the present knowledge about the data and personal interest, but the approach is general.
process stoichiometries underlying the transduction of solar
radiation into phyto-energy (i.e. free energy contained in
II. Approach
phytomass) to arrive at an estimate of the potential (theore-
tically maximal) efficiency of whole-plant productivity. It Studies of potential (or actual) solar-energy-use efficiency
focuses on extant plant properties (e.g. C3 plants with pho- follow a general pattern (Fig. 1). The fate of a unit of solar
torespiration), but the analysis is expected to contribute to radiation incident on a plant community is traced through
an understanding of how genetic modifications might a series of ‘processes’ or steps, ending with new phytomass
increase plant production (Reynolds et al., 2000; Murchie production. The ‘output : input’ ratio of each step is evalu-
et al., 2009; Zhu et al., 2010). ated using physical or biochemical theory, a summary of
The relationship between solar radiation input and plant empirical observations, or both. Indeed, analyses of
production (or output) is often expressed as the phytomass potential efficiencies often rely on observations of actual
grown per unit of solar radiation intercepted or absorbed efficiencies when underlying theory is insufficiently developed.
(kg MJ)1). A more meaningful ratio is that of the accumu- This review considers each of the processes (steps) in
lated phyto-energy per unit solar radiation input (J J)1), Fig. 1, and assigns or derives values the reviewer believes to
because that is a true efficiency. Phyto-energy accumulation be appropriate to the potential efficiency for extant plants.
is the change (during a defined period) in the product of After briefly considering the spectral properties of solar radi-
phytomass heat of combustion (DHC, MJ kg)1) and phyto- ation and how effectively plants can absorb it (the top ‘half’
mass per unit ground area (kg m)2). Solar radiation input of Fig. 1a,b), the analysis turns to quantitative biochemis-
(incident or absorbed) in MJ m)2 is integrated over the try. This includes summing up the reactions that convert
same period. The ratio, or solar-energy-use efficiency, CO2 to photosynthate (i.e. sucrose and starch) to quantify
circumvents the difficulties in comparing plants with differ- the stoichiometries between CO2 assimilation and the input
ent DHC. For example, grain sorghum (Sorghum bicolor) of ATP and NADPH required from photochemistry.
whole-plant DHC was 17.2 MJ kg)1, whereas adjacently Photosynthesis and photorespiration by C3 and C4 plants
grown soybean (Glycine max) contained 19.1 MJ kg)1 are considered separately and compared. The metabolic cost
(Amthor et al., 1994). The 11% greater soybean DHC must of photosynthate translocation is considered, and the
be considered when comparing solar energy use between whole-plant maintenance energy requirement is estimated.
the species. Indeed, a wide range of DHC is found among Reactions that convert the remaining photosynthate (i.e.
organs and species (Table 1) and, especially, among plant photosynthate remaining after translocation and mainte-
biochemical constituents (Table 2). Differences among nance energies are expended) to the main components of
organs harvested from different crop species can be note- new structural phytomass (cellulose, hemicelluloses, lignins,
worthy: values for potato (Solanum tuberosum) tubers, proteins, lipids and organic acids) are summed to quantify
wheat (Triticum aestivum) ears, maize (Zea mays) seeds, the stoichiometries between growth, ATP and NADPH use
lupin (Lupinus albus) pods, soybean pods and sunflower (requirement), and photosynthate consumption.
(Helianthus annuus) seeds were 16.8, 17.3, 18.2, 19.1, 21.1 The output : input ratio (J J)1) is the measure of effi-
and 26.9 MJ kg)1, respectively (Shinano et al., 1993). ciency applied to component processes. It is herein symbol-
Unfortunately, DHC is infrequently measured in plant ized as YE and is estimated by dividing the energy content
production studies. of end products by the energy content of substrate inputs,

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 941

Table 1 Selected measured phytomass heats of combustion

Heat of combustion (DHC, MJ kg)1)

Species Root Stem, wood Leaf Seed, fruit Whole plant Source

Glycine max 18.3 17.2 19.0 22.8 19.1 A


Helianthus annuus 16.5 16.1 16.0 28.3 16.7 B
19.3 16.8 14.2 21.0 18.1 C
Miscanthus · giganteus 16.5 18.2 19.0 18.0 D
Sorghum bicolor 16.7 17.5 17.7 17.0 17.2 A
Zea mays 13.4 17.4 16.9 18.0 17.5 C
Juglans regia (seedlings) 17.0 17.7 19.0 33.3 E
Hardwood forest trees 17.7–20.4 18.8–21.0 F
Pinus species 20.2 22.0 23.5–29.8 B, F
Tropical mangrove forest 16.9 17.7 17.5 17.0 G
Tropical moist forest 16.6 17.6 16.1 18.0 G

Glycine max ‘root’ included nodules.


Sources: A, Amthor et al. (1994); B, Long (1934); C, Lieth (1968); D, Beale & Long (1995); E, Gary et al. (1995); F, Gower et al. (1984);
G, Golley (1969).

Table 2 Heats of combustion of key phytomass constituents mechanistically. Conversely, stoichiometries of photon
absorption and photophosphorylation, mitochondrial elec-
Fraction carbon Heat of combustion (DHC) tron transport and oxidative phosphorylation, energetics of
[MJ translocation and maintenance requirement are debated or
Constituent (kg C kg)1) (MJ kg)1) (mol C))1] unresolved.
After the potential efficiencies of each process (step) have
Fructose 0.4000 15.60 0.4684
Glucose 0.4000 15.57 0.4675
been evaluated, they are multiplied together to obtain the
Sucrose 0.4211 16.49 0.4703 overall potential efficiency of conversion of solar radiation
Starch 0.4444 17.48 0.4725 to phyto-energy (see Monteith, 1972). The overall potential
Cellulose 0.4444 17.35 0.4687 efficiency is compared with results from similar theoretical
Hemicelluloses1 0.409–0.493 13.39–20.95 0.393–0.510 studies, and with field measurement-based estimates of
Lignins2 0.631–0.725 26.24–30.50 0.500–0.507
Amino acids3 0.297–0.654 13.91–31.62 0.400–0.750
actual efficiencies of exceptional plant communities.
Lipids4 0.666–0.776 33.28–39.69 0.600–0.627 This review acknowledges that sucrose and starch are the
Organic acids5 0.267–0.414 2.70–11.41 0.122–0.332 main products of photosynthesis (Heldt, 2005), and that
sucrose is the main (not sole) form of carbon translocated
Details are given in Supporting Information Table S1.
1 throughout plants (Ziegler, 1975; Lunn & Furbank, 1999;
, Ranges for arabinose, xylose, fucose, galactose, glucuronate,
methylated glucuronate, mannose and rhamnose residues in Rennie & Turgeon, 2009; Slewinski & Braun, 2010). In
hemicelluloses. this analysis, respiration and growth are initiated by cleaving
2
, Ranges for p-coumaryl alcohol, coniferyl alcohol and sinapyl sucrose with invertase (yielding glucose and fructose) or
alcohol residues in lignins. sucrose synthase (yielding fructose and UDP-glucose), as
3
, Ranges for the 20 amino acid residues in proteins.
4 considered appropriate for specific processes. Historically,
, Ranges for capric acid, caprylic acid, glyceryl trioleate, glyceryl
tripalmitate, lauric acid, linoleic acid, linolenic acid, myristic acid, glucose was specified as the product of photosynthesis and
oleic acid, palmitic acid and stearic acid. the initial substrate of growth and respiration (Penning de
5
, Ranges for aconitic acid, citric acid, malic acid, oxalic acid and Vries et al., 1974; Williams et al., 1987; Thornley &
oxaloacetic acid (OAA). Johnson, 1990). For plant growth and respiration, this was
a hold over from studies of micro-organisms that resulted
in minor differences in the calculated potential process
including solar radiation. A new compilation of plant con- efficiencies relative to sucrose-based plant metabolism
stituent DHC values is used to evaluate YE of metabolism. (examples below).
Because the pathways of anabolic and catabolic carbon Importantly, all analyses of potential solar-energy-use
flow are well understood, the related potential stoichiome- efficiency reduce complex (bio)physical and (bio)chemical
tries can be quantified mechanistically. Quantitative rela- processes to simplified summaries. The goal is to encapsu-
tionships between photon absorption and photosynthetic late the overriding quantitative relationships in these
NADPH formation, and between carbohydrate oxidation summaries to provide a useful and realistic (not necessarily
and respiratory NAD(P)H production, are also established precise) model of reality.

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
942 Review Tansley review Phytologist

(a) Potential (maximal) efficiency but this fraction increases as solar radiation approaches
100 Total solar radiation (incident) Earth’s surface because the atmosphere more strongly
55.6 Not photosynthetically active (incident) absorbs and reflects radiation outside this waveband. The
44.4 Photosynthetically active (incident) fraction at Earth’s surface varies with location, season, solar
3.7 Canopy albedo elevation and sky condition, topics beyond present consid-
40.7 Absorbed by leaves eration (see, for example, Monteith, 1972). Based on
4.44 Inactive absorption summer data in a comprehensive study at 36.6N latitude
36.26 Absorbed by photosynthetic pigments (Texas, USA), 48% is taken as a representative fraction of
28.34 Lost as heat (and fluorescence) total solar energy that is in the 400–700 nm waveband
7.92 Assimilated in photosynthesis (Britton & Dodd, 1976).
1.98 Respiration Because photosynthesis is a quantum process, the distinc-
5.94 New free energy in phytomass tion between solar energy flux (irradiance) and photon flux
density is important; photon energy is inversely related to
(b) Actual (observed) efficiency
wavelength, so that the potential efficiency of energy use is
100 Total solar radiation (incident)
greater with longer wavelength photons. The maximal spec-
55 Not photosynthetically active (incident)
tral solar irradiance may occur at c. 450–500 nm, whereas
45 Photosynthetically active (incident)
the maximal spectral photon flux density occurs more
7 Canopy albedo
38 Absorbed by leaves
broadly and at longer wavelengths (e.g. c. 550–700 nm)
3 Inactive absorption
(Fig. 2a,b). In leaves, low-light CO2 uptake per absorbed
35 Absorbed by photosynthetic pigments photon is greater in the 550–675 nm waveband than in the
31 Lost as heat (and fluorescence) 425–550 nm waveband (Fig. 2c), and photosynthesis can
4.0 Assimilated in photosynthesis be driven by photons outside the 400–700 nm waveband
1.0 Maintenance respiration (although the ‘spillover’ is modest; Fig. 2c), and so there is
3.0 Available for growth no simple (square-wave) spectral gauge of PAR (and see
0.8 Growth respiration Evans, 1987). Nonetheless, photons with wavelengths
2.2 New free energy in phytomass beyond c. 700 nm are insignificant for oxygenic photosyn-
Fig. 1 Two classic analyses of solar-energy-use efficiency for thesis (Emerson, 1958; Ort & Yocum, 1996), leaf absorp-
phytomass production: (a) potential (theoretically maximal) tance declines sharply between 700 and 750 nm (McCree,
efficiency adapted from Loomis & Williams (1963) and (b) 1972a) and the fraction of solar energy with wavelengths
generalized actual efficiency adapted from Warren Wilson (1967).
< 400 nm is small (Fig. 2), and so the 400–700 nm wave-
For both analyses, plant communities intercept all incident solar
radiation and the 400–700 nm waveband is designated as band is a reasonable definition of PAR. McCree (1972b)
photosynthetically active radiation (PAR). Numerical values indicate suggested that clear-sky (sun plus sky) PAR contained
relative energy units. Bold text and arrows indicate ‘retention’ of 4.57 mol photons MJ)1, which is the value adopted herein
solar energy; others indicate energy losses. Potential efficiency was (the illustrative spectra in Fig. 2a,b yield the ratio 4.55).
based on 4.65 mol photons MJ)1 PAR and a 10-photon
The fraction of incident solar radiation intercepted by a
requirement to assimilate a CO2 molecule; the analysis was
conducted before full appreciation of the photorespiration and plant community depends on the leaf area and orientation.
metabolic differences between C3 and C4 plants. As adapted here, Sparse canopies intercept little radiation; dense canopies
the potential efficiency is 12% greater than the result given by may intercept it all. Intercepted radiation is absorbed, trans-
Loomis & Williams (1963) to account for the 12% greater energy mitted or reflected. Canopies fully intercepting incident
concentration (DHC) in ash-free phytomass compared with
solar radiation might absorb 90–95% of PAR in the solar
photosynthate; that is, some of the energy in the respiratory
substrate of Loomis & Williams (1963) is herein retained in new spectrum (e.g. Hipps et al., 1983). However, some of that
phytomass. As adapted here, based on the data summarized by PAR may be absorbed by pigments that do not contribute
Warren Wilson (1967), actual efficiency involves a ‘true growth to photosynthesis, and so an allowance was made for
yield’ of 0.73, rather than the value of 0.67 used in the original inactive PAR absorption by Loomis & Williams (1963).
analysis.
Speculative values for inactive absorption of c. 4–10% of
intercepted PAR have been given (Loomis & Williams,
1963; Warren Wilson, 1967; Long et al., 2006). The 10%
III. Solar radiation absorption
value used by Loomis & Williams (1963) was based on
The 400–700 nm waveband is usually designated ‘photo- leaf-level data; a canopy-scale value might differ. The issue
synthetically active radiation’ (PAR) (McCree, 1981). of inactive absorption, especially at the canopy scale, is
Equating PAR with this waveband sparked modest contro- unresolved and sometimes ignored. For present purposes, it
versy several decades ago, but it is now generally accepted is assumed that a full canopy can absorb 93% of incident
without question. Only c. 39% of extraterrestrial solar PAR and that 92% of that absorption can be by photo-
energy is in the 400–700 nm waveband (Gueymard, 2004), synthetic pigments.

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 943

(a)Spectral irradiance 1. C3 photosynthesis


(J m–2 s–1 nm–1) 1.5
C3 photosynthesis – from CO2 to fructose 6-P – can be
1.0 summarized by (Supporting Information Table S2a):
0.5
6 CO2 þ 18 ATP þ 12 NADPH
0
! fructose 6-P þ 18 ADP þ 17 Pi þ 12 NADP:
(b)
(µmol m–2 s–1 nm–1)
Spectral photon flux

6 Thus, the photosynthesis of fructose 6-P requires three


ATP and two NADPH molecules per CO2 molecule but,
4
to drive photosynthesis to completion, that is to sucrose or
2 starch, an additional 1 ⁄ 12 or 2 ⁄ 12 ATP ⁄ CO2 is required,
respectively (Table S2b,c). The ATP and NADPH required
0
for photosynthesis can result from photosynthetic linear
(c)
(whole-chain) electron transport (LET) coupled to photo-
(CO2/absorbed photon)

1.0
Relative CO2 uptake

phosphorylation, possibly in combination with cyclic elec-


tron transport (CET) and ⁄ or pseudocyclic electron
0.5
transport, also coupled to photophosphorylation (Asada,
1999; Allen, 2003; Yin et al., 2004).
0
For LET, four photons absorbed by pigments associated
300 400 500 600 700 800 900 1000 with photosystem II (PS II) are sufficient to extract four
Wavelength (nm)
electrons from two water molecules and to release one O2
Fig. 2 (a) Spectral horizontal solar irradiance, 5 m above green molecule and four protons into the chloroplast thylakoid
grass, at Lincoln, Nebraska (USA), at 11:30 h local time (c. 10:58 h
solar time) on 10 August 2010, simulated with SMARTS version
lumen. The electrons are transported to plastoquinone (Q)
2.9.5 (Gueymard, 1995, 2001, 2004) for a clear sky (calculated within the thylakoid membrane, forming reduced plasto-
atmospheric transmittance of c. 0.73). Calculations covered the quinone (QH2). Cytochrome b6f, in turn, transports
waveband 280–4000 nm, but only results for 290–1000 nm are electrons from QH2 to photosystem I (PS I) via plastocya-
shown. This simulation is for illustrative purposes; the actual nin (PC). Electron transport from PS II to PS I is coupled
irradiance at any time and place may depart from these values
because of differences in time ⁄ date, location and sky conditions, but
to the translocation of protons from the chloroplast stroma,
the relative spectral distribution represents general daylight well. (b) through the thylakoid membrane, into the thylakoid lumen.
Spectral photon flux area density corresponding to irradiance in (a), If a ‘Q-cycle’ of Q reduction ⁄ oxidation is engaged, which
with the 400–700 nm waveband hatched. (c) Relative ‘spectral may be likely under physiological conditions (Berry &
photosynthesis’ of leaves of eight field-grown plant species (i.e. net Rumberg, 1999; Sacksteder et al., 2000), two protons are
CO2 assimilated, adjusted for respiration rate in the dark at the same
temperature) per absorbed photon, scaled to a maximum value of
translocated per electron transported (i.e. H+ ⁄ e) = 2).
1.0 (McCree, 1972a; and see McCree, 1981). The eight-species Without a Q-cycle, H+ ⁄ e) = 1.
mean is shown by the wide continuous (central) line; narrow The absorption of another four photons, by PS I pig-
continuous lines show minimal and maximal values among the eight ments, can drive the transport of four electrons from PS I to
species. The dashed line indicates a laboratory-grown Brassica ferredoxin (Fd) and then to Fd-NADP reductase, reducing
oleracea leaf after removal of the adaxial epidermis (McCree &
Keener, 1974); the optical properties of the epidermis reduce the
two NADP molecules in the chloroplast stroma. [One elec-
use of photons with wavelengths below c. 400 nm for tron reduces one Fd and two reduced ferredoxin (Fdred)
photosynthesis. In (a), there are 411 J m)2 s)1 in the 400–700 nm reduce one NADP.] In sum, the absorption of eight pho-
waveband and, in (b), there are 1872 lmol (photons) m)2 s)1 in tons (four by PS I, four by PS II) can reduce two stromal
this waveband, which results in 4.55 mol photons MJ)1 between NADP molecules – meeting the NADPH requirements to
400 and 700 nm.
assimilate one CO2 molecule – and deposit up to 12 pro-
tons in the thylakoid lumen.
Protons moving from the lumen into the stroma, via
CF1–CF0 ATP synthase complexes traversing thylakoid
IV. Quantum requirement for CO2 assimilation
membranes, drive photophosphorylation. The number of
The quantum requirement is the number of photons that protons passing through an ATP synthase per ADP phos-
must be absorbed to assimilate a CO2 molecule phorylated (H+ ⁄ ATP) places a limit on ATP production.
(photon ⁄ CO2). It depends on ATP and NADPH require- For some time, H+ ⁄ ATP was thought to be about three,
ments for CO2 assimilation, and the number of photons based on in vitro measurements, but more recent experi-
needed to generate this ATP and NADPH. mental results give about four (e.g. Van Walraven et al.,

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
944 Review Tansley review Phytologist

1996; Turina et al., 2003; Steigmiller et al., 2008). At starch). In this case, the deficit is 0.40–0.83 ATP per oxy-
about the same time, the number of c subunits in the CF0 genation. If cyclic photophosphorylation fills this deficit,
rotor ring was found to be 14 (Seelert et al., 2000; Vollmar the theoretical photorespiratory quantum requirement (or
et al., 2009), which may be critical, because this number penalty) is 8.8 or c. 9.93 photons per oxygenation with
divided by the number of catalytic sites on CF1 (i.e. three) H+ ⁄ ATP = 4 or 14 ⁄ 3, respectively.
might ‘mechanistically’ define H+ ⁄ ATP (von Ballmoos The introduction of a bacterial glycolate degradation
et al., 2009). In this case, it is 14 ⁄ 3 (c. 4.67), 17% greater pathway into Arabidopsis thaliana (Kebeish et al., 2007) has
than the ‘measured’ value of four. Consensus on in vivo important implications for the photorespiratory quantum
H+ ⁄ ATP does not yet exist, however (more below). penalty. Substitution of this pathway for the photorespira-
With H+ ⁄ ATP equal to either four or 14 ⁄ 3, eight pho- tory cycle can be summarized by (Table S3b):
tons depositing 12 protons into the lumen could generate
10 ribulose1;5-P2 þ 10 O2 þ 29 ATP þ 15 NADPH þ 5 NAD
three or c. 2.57 ATP, respectively, neither sufficient to meet
! 9 ribulose 1;5-P2 þ 5 CO2 þ 29 ADP þ 31 Pi þ 15 NADP þ 5 NADH
the ATP demands given above to photosynthesize sucrose
or starch (but matching exactly the three ATP ⁄ CO2 Relative to normal photorespiration, this reaction set requires
required for photosynthesis of fructose 6-P if H+ ⁄ ATP is 0.5 fewer ATP and 0.5 fewer NADPH per oxygenation.
four). The deficit (0.083–0.595 ATP ⁄ CO2) might be met Moreover, it produces 0.5 NADH per oxygenation. One CO2
by cyclic photophosphorylation (involving CET) or pseudo- is still released for every two oxygenations but, as implemented
cyclic photophosphorylation; CET is considered herein in A. thaliana, the CO2 is released within the chloroplast
because it can produce more ATP per photon. For CET, (rather than the mitochondrion as in normal photorespira-
which involves only PS I without O2 production or NADP tion) which could modestly inhibit oxygenation. Further
reduction, up to two protons can be translocated into the calculations herein assume unmodified photorespiration.
lumen per absorbed photon (involving a Q-cycle), so that
each photon might give rise to 0.50 or c. 0.429 ATP (for
H+ ⁄ ATP = 4 or 14 ⁄ 3, respectively). For C3 photosynthesis 3. Integrated C3 metabolism
producing sucrose, the quantum requirement would be c. The quantum requirement for net CO2 assimilation (photo-
8.17 or c. 9.19 photon ⁄ CO2 with H+ ⁄ ATP = 4 or 14 ⁄ 3, synthesis minus photorespiration) in the absence of respi-
respectively. Hence, H+ ⁄ ATP has a marked effect on the ration (QR, photon ⁄ CO2) is a combination of the quantum
potential quantum requirement. requirements for photosynthesis and photorespiration as
follows (Table S4):
2. Photorespiration
QR = QR;S þ ðQR;C þ QR;O vO =vC Þ=ð1  0:5vO =vC Þ
Although ribulose-1,5-P2 carboxylase ⁄ oxygenase (rubisco)
initiates C3 photosynthesis by carboxylating ribulose- where QR,S is the quantum requirement (photon ⁄ C) to con-
1,5-P2, it also initiates photorespiration – one of the vert fructose 6-P to photosynthetic end product (e.g.
Earth’s most active metabolic pathways – by oxygenating sucrose or starch), QR,C is the quantum requirement for the
ribulose-1,5-P2 (Bowes & Ogren, 1972; Lawlor, 2001). photosynthesis of fructose 6-P (photon ⁄ CO2), QR,O is the
Photorespiration constrains solar-energy-use efficiency, but quantum requirement for photorespiration (photon ⁄ oxy-
may benefit some plants by dissipating ‘excess’, potentially genation), vO ⁄ vC is the ratio of ribulose-1,5-P2 oxygenation
damaging absorbed radiation in stressful circumstances to carboxylation (O2 ⁄ CO2) and 0.5 is the CO2 released per
(Wingler et al., 2000; but also see Long et al., 2006). ribulose-1,5-P2 oxygenation (CO2 ⁄ O2).
The photorespiratory cycle can be summarized for one In C3 plants, temperature and [CO2] affect vO ⁄ vC (which
ribulose-1,5-P2 oxygenation by (Table S3a): is related to rubisco’s CO2 ⁄ O2 specificity, and may be species
specific) and therefore QR (Fig. 3). Hence, there is no single
10 ribulose1; 5-P2 þ 15 O2 þ 34 ATP þ 20 NADPH theoretical C3 plant QR. With H+ ⁄ ATP = 14 ⁄ 3, vO ⁄ vC = 0.35
! 9 ribulose 1; 5-P2 þ 5 CO2 þ 34 ADP þ 36 Pi þ 20 NADP and photosynthesis producing sucrose, QR is c. 15.3 photons ⁄
CO2; if H+ ⁄ ATP = 4, however, QR is c. 13.6 photons ⁄ CO2
where only 10 of the ‘15 O2’ molecules oxygenate ribulose- (Table 3). Remarkably, in C3 plants at 11C, changing
1,5-P2 (the other five O2 molecules oxygenate glycolate). H+ ⁄ ATP from 4 to 14 ⁄ 3 is equivalent, with respect to QR, to
For each rubisco-catalyzed oxygenation, 0.5 CO2 is released changing ambient [CO2] from 700 to 350 ppm (Fig. 3b).
and 3.4 ATP plus two NADPH are used (i.e. one NADPH
and two Fdred, which is equivalent to two NADPH). The
4. C4 photosynthesis
absorption of eight photons driving LET can therefore meet
NADPH requirements for one oxygenation, but not the full For present purposes, C4 photosynthesis refers to the
ATP need (as above for the photosynthesis of sucrose or NADP malic enzyme type, which includes the major C4

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 945

(a) 1.0 Table 3 Theoretical (minimal) quantum requirements for CO2


270 assimilation in the absence of respiration
(oxygenation/carboxylation)
0.8 Quantum requirement
350
(photon ⁄ CO2)
Ratio vO/vC

0.6
System vO ⁄ vC C4 overcycling H+ ⁄ ATP = 4 H+ ⁄ ATP = 14 ⁄ 3

0.4 700 C3 0.00 – 8.17 9.19


0.10 – 9.51 10.71
0.20 – 11.01 12.40
0.2
0.35 – 13.60 15.32
[CO2]
0.50 – 16.70 18.82
0 0.70 – 21.95 24.74
C4 0.00 0.00 12.17 13.86
(b) 30 0.03 0.00 12.62 14.37
270 0.03 0.05 12.82 14.61
25 0.03 0.10 13.02 14.85
Quantum requirement

350 0.03 0.20 13.43 15.32


(photon/CO2)

20
Quantum requirements are for the photosynthesis of sucrose,
accounting for photorespiration. The C4 system corresponds to
15 C4 700 NADP-malic enzyme-type C4 species (e.g. maize, sugarcane,
sorghum). vO ⁄ vC is the oxygenation ⁄ carboxylation ratio of ribulose
10 1,5-P2. C4 overcycling replaces CO2 delivered to bundle sheath cells
C3 minimum via the C4 cycle which subsequently leaks out of these cells. Entries
5 of zero for vO ⁄ vC or C4 overcycling are absolute minima that are not
expected in nature. Results are shown for photophosphorylative
0 H+ ⁄ ATP = 14 ⁄ 3 (in addition to H+ ⁄ ATP = 4) as a gauge of its
10 20 30 40 potential significance; this review tentatively rejects it as a likely
Leaf temperature (°C) value in extant plants (see text).
Fig. 3 (a) Calculated C3 leaf vO ⁄ vC (the ratio of rubisco-catalyzed
ribulose-1,5-P2 oxygenations ⁄ carboxylations; see Farquhar & von
Caemmerer, 1982) as affected by temperature and ambient [CO2] the bundle sheath and regenerate the CO2 acceptor (Hatch,
(ppm). The relationship vO ⁄ vC = 2C* ⁄ Ci is shown, where C* is the 1987; Kanai & Edwards, 1999; Table S5). Some CO2 leak-
CO2 photocompensation concentration (ppm) in the absence of
age from bundle sheath cells is inevitable (Hatch et al.,
respiration and Ci is the intercellular [CO2]. Ci was taken to be
0.72 · ambient [CO2] for healthy C3 leaves, although the ratio 1995), so that the C4 cycle operates more rapidly (‘C4 over-
declines slightly with increased [CO2] (Long et al., 2004). C* was cycling’) than the C3 cycle in C4 plants. Apparently, there is
calculated after Bernacchi et al. (2001): no theoretically determined minimal overcycling amount. A
minimal experimental value is c. 10% (von Caemmerer,
C ¼ exp½19:02  37:38=ð0:0083145ðT þ 273:15ÞÞ
2000). With 10% overcycling, C4 photosynthesis would
where T is the temperature (C). The value of 270 ppm [CO2] require 2.2 ATP ⁄ CO2 more than C3 photosynthesis
approximates the preindustrial atmosphere, 350 ppm [CO2] reflects (NADPH requirements are equal). This ‘extra’ ATP is
the recent atmosphere and 700 ppm [CO2] is a possible future (and assumed to come from cyclic photophosphorylation in bun-
distant-past) atmospheric value. The fraction of CO2 assimilated,
dle sheath chloroplasts (Hatch, 1987; Laisk & Edwards,
which is subsequently released as CO2 through photorespiration, is
0.5vO ⁄ vC, and so the ratio vO ⁄ vC = 1 corresponds to 50% loss of 2000). Thus, simultaneous operation of LET and CET
assimilated CO2 to photorespiration. (b) Theoretical quantum occurs for C4 photosynthesis, with LET confined mainly to
requirements for C3 leaf CO2 assimilation (i.e. net CO2 assimilation, mesophyll cells and CET to bundle sheath cells (Hatch,
or photosynthesis minus photorespiration, in the absence of 1987). In either C3 or C4 systems, CET activity requires
respiration) as a function of temperature and ambient [CO2], as in
that PS I absorb more photons than PS II at the whole-leaf
(a). The continuous lines correspond to photophosphorylative
H+ ⁄ ATP = 4 and the curved dashed line corresponds to scale, which is observed (Nelson & Yocum, 2006). In addi-
H+ ⁄ ATP = 14 ⁄ 3 (and [CO2] = 700 ppm). The lower horizontal tion, the spatial organization of PS I and PS II within
dashed line is the theoretical minimal C3 quantum requirement (i.e. thylakoids may be conducive to simultaneous LET and
without photorespiration) of 8.17 photon ⁄ CO2 (with H+ ⁄ ATP = 4). CET inside a single chloroplast (Dekker & Boekema,
The upper horizontal dashed line (=13.02 photon ⁄ CO2) corresponds
2005), but significant C3 leaf CET activity is controversial
to a C4 leaf with vO ⁄ vC = 0.03, CO2 overcycling = 0.10 and H+ ⁄ ATP =
4 (Table 3). All lines correspond to the production of sucrose. (Joliot & Joliot, 2002; Munekage et al., 2004; Johnson, 2005).
By concentrating CO2 in the bundle sheath (where rubi-
crops: maize, sugarcane, sorghum and millet. This C4 cycle, sco operates in C4 leaves), photorespiration is suppressed,
which is a preface to C3 photosynthesis in C4 leaves, requires but not eliminated. The minimal (potential) rate is
two ATP to assimilate a CO2 in the mesophyll, release it in unknown, but maize experiments indicate vO ⁄ vC of c. 0.03

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
946 Review Tansley review Phytologist

with normal CO2 supply (de Veau & Burris, 1989); this Pearcy, 1983). As atmospheric [CO2] continues to increase,
value is used herein. the quantum requirement of C3 plants should decline, with
The C4 plant quantum requirement is calculated as above little effect on C4 plants. At 700 ppm CO2, the temperature
for C3 plants with the ‘extra’ ATP requirement for the C4 at which the quantum requirement for C4 photosynthesis
cycle (with overcycling) added to QR,C. For vO ⁄ vC = 0.03 becomes superior (i.e. smaller than the C3 quantum
and C4 overcycling of 0.10, the C4 quantum requirement is requirement) increases to nearly 37C with the biochemical
c. 13 photon ⁄ CO2 with H+ ⁄ ATP = 4, but c. 14.8 photon ⁄ parameters underlying Fig. 3.
CO2 with H+ ⁄ ATP = 14 ⁄ 3 (Table 3). In contrast with C3
plants, the C4 plant quantum requirement is largely insensi-
7. Theoretically maximal efficiency of photosynthesis
tive to temperature and [CO2] because vO ⁄ vC is stable.
For daylight containing 4.57 mol photons MJ)1 PAR, a C3
leaf at 30C and 350 ppm atmospheric [CO2] (i.e. vO ⁄ vC 
5. Uncertainty about H+ ⁄ ATP and its importance
0.45) could photosynthesize c. 0.025 mol sucrose MJ)1
An eight-photon requirement (per CO2) for NADPH absorbed PAR (excluding inactive absorption). Sucrose con-
production appears to be fixed, but the photon ⁄ ATP stoi- tains 5.643 MJ mol)1 (Table S1), and so the efficiency of
chiometry is less clear. It depends on the number of protons photosynthesis (including photorespiration) could be as high
deposited in the lumen per absorbed photon (H+ ⁄ photon) as 0.140 J J)1 absorbed PAR. For C3 photosynthesis of
and H+ ⁄ ATP. Thirty years ago, it was widely accepted starch (2.835 MJ mol)1 glucose residue), the potential effi-
(reviewed by Farquhar & von Caemmerer, 1982) that LET ciency is 0.139 J J)1. At 20C, the potential C3 efficiencies
accumulated one (rather than 1.5) proton in the lumen per increase to 0.179 J J)1 (sucrose) and 0.177 J J)1 (starch).
absorbed photon, H+ ⁄ ATP was three (rather than four or The potential efficiency of C4 photosynthesis (vO ⁄ vC =
14 ⁄ 3) and CET pumped one (rather than two) proton per 0.03, C4 overcycling = 0.10) of sucrose is 0.165 J J)1
absorbed photon. With these assumptions, C3 sucrose pho- absorbed PAR. For starch, the potential efficiency is
tosynthesis would require 9.25 photon ⁄ CO2, which is more 0.163 J J)1. This indicates that as much as c. 16–18% of
than that observed in some apparently reliable quantum use the energy in clear-sky PAR absorbed by photosynthetic
measurements (e.g. Walker & Osmond, 1986; Björkman & pigments could be retained in C3 and C4 photosynthesis
Demmig, 1987; Evans, 1987) when modest allowance is (for the conditions specified).
made for inactive absorption. The corresponding quantum In addition to CO2, both NO3 and SO4 can be photo-
requirement for C4 photosynthesis (with only modest C4 synthetically assimilated (Beevers & Hageman, 1969; Pate
overcycling and inactive absorption) would exceed some & Layzell, 1990; Hell, 1997; Noctor & Foyer, 1998). SO4
measured quantum use values in C4 leaves (e.g. Ehleringer assimilation is a minor fraction of plant energetics and is
& Pearcy, 1983). included in amino acid biosynthesis below. If NO3 photo-
Revisions (as above) to H+ ⁄ photon and H+ ⁄ ATP brought assimilation occurs, it could increase apparent QR, but theo-
theoretical calculations into line with the data, but the pro- retically by < 5% (Table S47). Plants absorbing NH3 from
posed 14 ⁄ 3 H+ ⁄ ATP stoichiometry re-raised the possibility the soil – the most efficient case, and the case adopted
of a theoretical C3 quantum requirement exceeding nine herein – need not expend energy for NO3 reduction, but
photon ⁄ CO2. Therefore, if it is accepted that H+ ⁄ photon is other considerations arise (see Raven, 1985).
1.5 for LET and two for CET, and that the ATP require-
ment for C3 photosynthesis is c. 3.1 ATP ⁄ CO2, the 14 ⁄ 3
V. Respiration
H+ ⁄ ATP ratio is tentatively rejected for incompatibility with
seemingly reliable leaf-level quantum use measurements. Analyses of potential solar-energy-use efficiency sometimes
Further calculations herein are therefore confined to a treat respiration simply as a fraction (typically 30–40%) of
photophosphorylative H+ ⁄ ATP ratio of four. photosynthesis (e.g. Loomis & Williams, 1963; Long et al.,
2006; Zhu et al., 2008). (It may be of interest that Bonner’s
(1962) discussion of ‘the upper limit of yield by the world’s
6. C3 vs C4 photosynthesis
crop plants’ did not once mention respiration). A
When vO ⁄ vC is small, C3 plants have a smaller quantum better approach is to quantify theoretical stoichiometries of
requirement than C4 plants. Once C3 leaf vO ⁄ vC exceeds c. respiratory reactions ⁄ pathways and numerically relate them
0.32, however, the theoretical minimum C4 quantum to essential growth and maintenance processes. Although a
requirement becomes superior (Table 3). As presently cal- simple respiration : photosynthesis ratio may sometimes
culated, this should occur at temperatures above c. 23C adequately summarize experimental data (Gifford, 1995),
with 350 ppm atmospheric [CO2] (Fig. 3), which is consis- it need not provide insights into potential efficiency.
tent with experimental estimates of quantum use in C3 and Moreover, as Beevers (1970) noted: ‘understanding...of res-
C4 leaves (Ehleringer & Björkman, 1977; Ehleringer & piration has progressed to the point where it is no longer

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 947

Intermembrane Inner Mitochondrial


Fig. 4 Schematic diagram of the mitochondrial electron transport
space membrane matrix
chain (mETC), proton translocation across the inner mitochondrial
NADH membrane and oxidative phosphorylation. The ‘UQ pool’ (within
4 H+ Complex I 4 H+ the inner membrane) is composed of ubiquinone (UQ) and reduced
NAD
UQ (UQH2), which are electron acceptor and donor, respectively.
NADH NADH NADH UQ can be reduced by five dehydrogenases (DHs). Complex I
NADH
NAD DH DH oxidizes matrical NADH, reduces UQ and translocates four protons
NAD
2e– across the inner membrane for each NADH oxidized, that is for each
NADPH NADPH Complex FADH 2 electron pair (2e)) transported (Galkin et al., 2006). Matrical NADH
NADP DH UQ II FAD can also be oxidized by a second matrix-facing NADH DH, which
Pool does not translocate protons (Douce & Neuburger, 1989). Complex
2 H+ + II, the only enzyme that is both part of the TCA cycle and mETC,
Alt. 0.5 O2
2e– oxidizes succinate (forming fumarate) by reducing FAD to FADH2
oxidase H2O (FAD is a Complex II component). Complex II does not translocate
2 H+ 2 H+ protons. Cytosolic (intermembrane space) NADH and NADPH can
Complex III
be oxidized by cytosol-facing NADH and NADPH DHs, reducing UQ
cyt c 2e– (Douce & Neuburger, 1989). UQH2 donates electrons to either
0.5 O2 + 2 H+ Complex III or alternative (Alt.) oxidase; the latter does not
4 H+ Complex IV 4 H+ translocate protons. In each case, one water molecule is formed
H2O from free oxygen for every NADH, FADH2 or NADPH oxidized; this
is analogous, but opposite in ‘direction’, to photosynthetic water
ATP ATP
Antiporter splitting, in which two electrons are extracted from water,
ADP ADP
producing free oxygen, to reduce one NADP molecule. Complex III
H+ H+ reduces cytochrome (cyt) c and Complex IV oxidizes cyt c.
Symporter Together, Complexes III and IV translocate six H+ ⁄ 2e) (a Q-cycle is
Pi Pi
assumed), partitioned for convenience as two and four in the
F1 ATP schematic diagram (Trumpower, 1990; Wikström, 2000; Brand,
F0
x H+ x H+ 2005; Hinkle, 2005). ADP is phosphorylated by F1F0-ATP synthase,
which translocates x (i.e. H+ ⁄ ATP) protons into the mitochondrial
Pyruvate Pyruvate matrix per ADP phosphorylated. The value of x is debated, with
Symporter
H+ H+ three and 10 ⁄ 3 (c. 3.33) currently cited (see text). ATP is exported
H+ + HCO3 CO2 + H2O from the matrix in exchange (antiport) for ADP, and each ADP
entering the mitochondrial matrix is accompanied by a Pi
transported with a proton (symport). (This is an important difference
necessary or proper to regard this process simply as a black between chloroplasts and mitochondria: photophosphorylation
takes place within the chloroplast stroma, where most of the
box, a negative quantity in the equation for plant yield’.
resulting ATP is used, and oxidative phosphorylation occurs in the
Respiration [i.e. glycolysis, the oxidative pentose phos- mitochondrial matrix, but much of the resulting ATP is used
phate pathway (OPPP), TCA cycle, mitochondrial electron elsewhere.) Mitochondrial uptake of pyruvate (the main TCA cycle
transport chain (mETC) and oxidative phosphorylation] substrate) is coupled to proton symport (Papa et al., 1971), but
produces ATP, NAD(P)H, CO2 and heat. It also supplies LaNoue & Schoolwerth (1979) proposed that the proton influx is
balanced by the efflux of CO2 (the product of pyruvate oxidation)
carbon skeleton precursors of growth (Beevers, 1961), but
and its conversion to carbonic acid (and proton generation) outside
this function is explicitly dealt with below (Substrate the mitochondria. Leaks and slips (Brand, 2005), which reduce
requirement for growth); the immediate issue is ATP and efficiency, are ignored here. Much present knowledge of mETC is
NADPH provision. from research with animals and microbes; it is implicit that the
mechanisms and stoichiometries are similar in plants.

1. ATP production from sucrose oxidation


(Table S6b). Using four pyruvates, the TCA cycle can pro-
Perhaps the most frequently mentioned metabolic stoichi- duce four ATP in substrate-level phosphorylations, 16
ometry in eukaryotic metabolism is the amount of ADP that NADH, four FADH2 and 12 CO2 (Table S7). NADH
can be phosphorylated during the oxidation of respiratory (from glycolysis and the TCA cycle) and FADH2 can be
substrate, often glucose. Only since c. 1990 has it become oxidized via mETC, resulting in translocation of up to 208
generally accepted (but not universally appreciated) that the protons (per sucrose) out of the mitochondrial matrix
ratio of ATP formed per glucose oxidized is less than the ‘tra- (Fig. 4). Four protons are used to import Pi (symport)
ditional’ c. 36 ATP ⁄ glucose (or equivalently c. 72 ATP ⁄ needed for the four substrate-level phosphorylations, but
sucrose) (Hinkle et al., 1991). How much less is debated. the remaining 204 protons are available to drive oxidative
Starting with sucrose, glycolysis initiated by invertase can phosphorylation via their flux back into mitochondria
produce (per sucrose): four pyruvate, four ATP and though F1F0-ATP synthases.
four NADH (Table S6a). One additional ATP (per sucrose) The H+ ⁄ ATP ratio of mitochondrial ATP synthases was
can be formed if sucrose synthase initiates glycolysis experimentally estimated to be c. two several decades ago

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
948 Review Tansley review Phytologist

and then revised to c. three (Ferguson & Sorgato, 1982; ical closed cycle of OPPP (Beevers, 1961) oxidizing sucrose,
Berry & Hinkle, 1983; Nicholls & Ferguson, 1992; Brand, summarized by (Table S8a):
2005; Hinkle, 2005). The recent determination that F0
rings in yeast mitochondria have 10 c subunits (Stock et al., Sucrose þ 2 ATP þ 24 NADP
1999), compared with 14 in chloroplasts, indicates that, ! 24 NADPH þ 2 ADP þ 2 Pi þ 12 CO2 :
mechanistically, H+ ⁄ ATP may be 10 ⁄ 3 (c. 3.33) for mito-
chondrial ATP synthases. In view of the tentative rejection Substituting 2 ⁄ YATP,sucrose for ‘2 ATP’ gives the
of the mechanistic 14 ⁄ 3 H+ ⁄ ATP value for photophosphor- relationship for NADPH formed per sucrose
ylation above, however, the experimental H+ ⁄ ATP of three oxidized (YNADPH,sucrose, NADPH ⁄ sucrose) as 24 ⁄ (1 + 2 ⁄
(rather than the mechanistic ratio 10 ⁄ 3) is adopted herein YATP,sucrose), which is c. 23.2 NADPH ⁄ sucrose with
for oxidative phosphorylation (but see Brand, 2005; YATP,sucrose = 59.5. Although closed-cycle OPPP operation
Hinkle, 2005). By including the proton imported into may be atypical, this definition of YNADPH,sucrose is a useful
mitochondria with each Pi (Fig. 4), the total proton quantification of sucrose requirement for NADPH produc-
requirement per oxidative phosphorylation becomes 1 + tion (e.g. Williams et al., 1987).
H+ ⁄ ATP, or about four. Thus, 51 ATP could be produced
by the 204 protons above through oxidative phosphoryla- 4. Alternative oxidase
tion (c. 47 ATP if H+ ⁄ ATP is 10 ⁄ 3). The ratio of ATP
formed per sucrose oxidized (YATP,sucrose, ATP ⁄ sucrose) is The mitochondrial alternative oxidase short circuits mETC,
then 59 if glycolysis is initiated by invertase, and 60 for reducing proton translocation out of the matrix (Fig. 4)
sucrose synthase-initiated glycolysis. YATP,sucrose = 59.5 ATP ⁄ and, although it appears wasteful, it may provide benefit
sucrose is used herein to represent efficient respiration (equiva- (Vanlerberghe & McIntosh, 1997; Robson & Vanlerberghe,
lent, for historical comparison, to 29.75 ATP ⁄ glucose). 2002). If it accounts for one-half of respiratory O2 uptake,
Although the operational H+ ⁄ ATP ratios of photophos- c. 30% of the potential for respiratory ATP production is
phorylation and oxidative phosphorylation are similar (or lost, but the measurement of alternative oxidase activity
identical) when accounting for the H+-Pi symport associ- is difficult (Day et al., 1996; Florez-Sarasa et al., 2007).
ated with oxidative phosphorylation, the H+ ⁄ ATP values of The key missing element is the quantification of its required
the ATP synthases themselves differ. This may appear engagement.
strange. Even if the F0 c-subunit number, call it z, does not My interpretation of the data in Millar et al. (1998) is
define H+ ⁄ ATP in the exact ratio z ⁄ 3, the relative difference that rapidly growing cells can avoid alternative oxidase
in c-subunit number may be related to relative H+ ⁄ ATP. engagement. Growth calculations herein therefore ignore it
But ‘why’ should H+ ⁄ ATP differ between chloroplasts and (i.e. YATP,sucrose = 59.5 for potential growth processes).
mitochondria? The reader is directed to von Ballmoos et al. Significant engagement (25–50% of O2 uptake) may be
(2009) for a brief speculation on this question. associated with maintenance, however (Millar et al., 1998;
Florez-Sarasa et al., 2007).

2. ATP production from ‘excess’ NADH


Many biosynthetic pathways generate net NADH (e.g.
VI. Photosynthate mobilization and
Tables S12–S14, S23, S24, etc.). These pathways require
translocation
NAD regeneration for continued operation. The coupling The mobilization of chloroplastic starch and the transloca-
of the oxidation of ‘excess’ NADH to ADP phosphorylation tion of sucrose via the phloem require ATP, which, in this
can be expedient. analysis, comes from respiration. This respiration is quanti-
Excess NADH is formed mainly in the cytosol and plast- tatively important to night-time source leaf metabolism
ids, and presumably has access to the cytosol-facing NADH (Bouma et al., 1995; Noguchi et al., 2001).
dehydrogenase on the inner mitochondrial membrane The cost of starch mobilization depends on the reactions
(Fig. 4), perhaps via NAD ⁄ NADH shuttles for plastidic involved (Noguchi et al., 2001); herein, chloroplastic starch
NADH. The maximal ratio of ATP formed per cytosolic is converted to sucrose via maltose (Chia et al., 2004; Weise
NADH oxidized by mitochondria (YATP,NADH-C, ATP ⁄ et al., 2004; Smith et al., 2005), summarized by (Table S9):
NADH) is 6 ⁄ (1 + H+ ⁄ ATP), which is 1.5 ATP ⁄ NADH
ðstarchÞn þ 2 ATP ! sucrose þ ðstarchÞn2 þ 2 ADP þ 2 Pi
(with H+ ⁄ ATP = 3).
where (starch)n indicates a starch polymer of n glucose resi-
dues. Thus, 2 ⁄ YATP,sucrose sucrose are respired to mobilize
3. NADPH production from sucrose oxidation
each sucrose unit (starch fi sucrose), giving a potential
The main biosynthetic electron donor is NADPH. Its YE of c. 0.963 for mobilization as follows: product is one
source (outside of photosynthesis) is taken to be a hypothet- sucrose (5.6434 MJ mol)1), substrate is two starch units

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 949

(5.6698 MJ in 2 mol units) plus 2 ⁄ YATP,sucrose mol sucrose moderate temperature, is set to 15% of photosynthate
for respiration to supply ATP (0.1897 MJ in 2 ⁄ YATP,sucrose remaining after mobilization and translocation (see Loomis
mol sucrose), giving 5.6434 ⁄ (5.6698 + 0.1897)  0.963 & Amthor, 1999). To account for lower C4 plant protein
(see Table S1 for heats of combustion). concentration, and presuming a relationship between pro-
The ATP required for phloem translocation depends on tein concentration and maintenance needs (Amthor, 1994),
the number of active membrane crossings and the cost of the speculative C4 plant minimum is set to 12% of photo-
each crossing (Amthor, 1994; Patrick, 1997; van Bel, synthesis. These values are meant to reflect maintenance
2003). Minimal values may be one active crossing and one requirements of healthy, rapidly growing plants and to
ATP per crossing, giving a potential YE of c. 0.983 for the include both ‘structure maintenance’ and ‘tool mainte-
process. For plants that require temporary storage between nance’ (Penning de Vries et al., 1974), and assume that
sources and (future) sinks (e.g. starch and protein stored in maintenance metabolism acclimates effectively to tempera-
stems and later mobilized for seed growth), additional ture fluctuations (Gifford, 1995). Any required alternative
mobilization and translocation costs are needed (Penning oxidase activity, which appears to be important to actual
de Vries et al., 1983). maintenance respiration (Florez-Sarasa et al., 2007), is
For photosynthesis producing 30% starch and 70% implicit in these values.
sucrose, the overall potential (maximal) efficiency of mobili-
zation plus translocation to sinks may be YE  0.973.
VIII. Substrate requirement for growth
Substrate requirement for growth is the amount of sucrose
VII. Maintenance
needed to provide carbon skeletons, ATP and NADPH for
Life requires maintenance to counteract local entropy and synthesis of a compound, or whole plant, including poly-
to acclimate to environmental fluctuations. This includes merization reactions. Theoretically minimal substrate
the regular replacement of enzyme and lipid populations requirements are calculated by tracing the most efficient bio-
with different populations better suited to new conditions chemical pathways from sucrose (or, historically, glucose) to
and developmental states, active transport to counteract specific products (e.g. cellulose or proteins), accounting for
leaks, repair of damage from, for example, endogenous and any net ATP and ⁄ or NAD(P)H needed (e.g. Penning de
exogenous oxidants, and repair ⁄ replacement of compounds Vries et al., 1974, 1983; Thornley & Johnson, 1990;
subject to spontaneous breakdown. ‘Maintenance respira- Amthor, 2003). For whole tissues ⁄ plants, substrate require-
tion’ is the CO2 and energy release associated with mainte- ments for individual (classes of) compounds are summed in
nance processes (Penning de Vries, 1975). An efficient proportion to phytomass composition (Thornley & France,
plant would circumvent unnecessary molecular turnover 2007). To derive the approximate whole-plant substrate
and leaks, and would carry out maintenance with maximal requirement, therefore, representative values are needed for
YATP,sucrose. cellulose, hemicelluloses, lignins, proteins, lipids, organic
In principle, the calculation of energy use (photosynthate acids and, in some plants, pectins and ⁄ or storage carbohy-
consumption) for maintenance is straightforward. For exam- drates (Penning de Vries et al., 1974, 1983). The cost of
ple, if one ATP is expended to pump one ion across a mem- mineral uptake is also needed. All of these classes of com-
brane, a leak of x ions will require x ATP (or x ⁄ YATP,sucrose pound are considered briefly below; more detail will some-
sucrose) for ion gradient maintenance. In practice the task is times be needed (e.g. if significant amounts of storage lipids
difficult. Although a bold theoretical assessment of actual or secondary compounds are synthesized).
maintenance respiration was made decades ago (Penning de The amount of substrate produced by photosynthesis
Vries, 1975; Penning de Vries et al., 1983), a lack of data on (minus photorespiration, respiration supporting trans-
essential (minimal) turnover and transport processes still pre- location and maintenance respiration) divided by the sub-
cludes the quantification of minimal maintenance needs strate requirement for growth dictates potential growth.
(Nelson, 1994). As more quantitative data become available Phytomass composition dictates DHC and, with substrate
for underlying maintenance processes, such as protein requirement, determines potential YE of growth. Because
turnover (Piques et al., 2009), theoretical re-evaluations of most carbon and energy in biosynthetic substrates are
maintenance requirements can be conducted. retained in end products during growth, substrate require-
In spite of criticizing above the use of simple respira- ments are not proportional to YATP,sucrose (Penning de Vries
tion : photosynthesis ratios, the quantification of minimally et al., 1983).
required maintenance respiration is now hedged because a
maintenance requirement must be specified for the present
1. Cellulose
analysis. From a personal perspective on data and theory
(Amthor, 2000), a daily sucrose requirement for essential Cellulose consists of long chains of b(1fi 4)-linked glucose
maintenance metabolism of nonwoody C3 plants, at residues and may be nature’s most abundant polymer.

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
950 Review Tansley review Phytologist

Although questions about cellulose biosynthesis remain rather than 0.99; with an up-to-date 29.75 ATP ⁄ glucose
(Somerville, 2006), the calculation of its substrate require- value (from above), it would further decline to 0.94. It is
ment is now simple. It is synthesized at the plasmalemma therefore quantitatively important to designate sucrose as
from cytosolic sucrose by the coordinated action of just two the biosynthetic substrate (Thornley & France, 2007).
enzymes: sucrose synthase and cellulose synthase. The net
transformation is:
2. Hemicelluloses and pectins
ðcelluloseÞn þ sucrose ! ðcelluloseÞnþ1 þ fructose
Hemicelluloses are semi-random polysaccharide heteropoly-
where (cellulose)n indicates a cellulose polymer composed mers (except glucans, which are composed entirely of glu-
of n glucose residues. Apart from the maintenance of associ- cose residues) that vary among species, tissues, and primary
ated enzymes and sucrose delivery, cellulose synthesis and secondary cell walls (Scheller & Ulvskov, 2010). They
involves no ATP or reductant. Assuming that the fructose may, as a group, be as abundant as cellulose.
formed (released into the cytosol) is available as substrate Hemicelluloses are synthesized from NDP-hexoses and
elsewhere, potential YE is c. 0.993 (Table 4). UDP-pentoses. Monomer synthesis (Tables S11–S18) is
Traditional substrate requirement calculations (e.g. mainly cytosolic. For polymerization (Table S19), NDP-
Penning de Vries et al., 1974; Williams et al., 1987) were sugars are imported into Golgi bodies in antiport with cor-
summarized as: responding NMPs; NDPs are cleaved from the imported
ðcelluloseÞn þ glucose þ 2 ATP ! ðcelluloseÞnþ1 sugars and hydrolyzed to NMP and Pi, providing energy for
the polymerization of the sugars (Orellana et al., 1997;
Together with the traditional estimate of 36 ATP ⁄ Wulff et al., 2000); and the cytosolic NMP is converted to
glucose resulting from respiration, YE would then be 0.95 NDP using ATP. An expensive methylation of some glu-
curonate residues occurs (Table S20).
Potential YE values for individual sugar residues within
Table 4 Calculated potential efficiencies of energy use (YE) during
the biosynthesis of polysaccharides and lignins from sucrose hemicelluloses cover the range 0.80–0.94 (Table 4). The
most efficiently produced hemicelluloses should be glucans,
Polymer or monomer residue YE (J J)1) galactomannans and galactoglucomannans, but many hemi-
celluloses are based on the less efficiently produced xylose
Cellulose 0.993
Starch (storage organ) 0.972 residue, which presumably confers some advantage(s).
Hemicelluloses (residues) Pectins are polysaccharides that cement other cell wall con-
Arabinose 0.865 stituents. They are relatively important in dicots, but only a
Xylose 0.867 minor component of grass cell walls. Homogalacturonan
Fucose 0.865
(with some of its carboxyl groups methylated) is a major pec-
Galactose 0.938
D-Glucose 0.938 tin type (Ridley et al., 2001; Wolf et al., 2009). Its theoretical
Glucuronate 0.865 substrate requirement is the same as that of glucuronate (and
Glucuronate (methylated) 0.802 its methylated form) in hemicelluloses.
Mannose 0.940
Rhamnose 0.865
Lignins (residues) 3. Lignins
p-Coumaryl alcohol 0.831
Coniferyl alcohol 0.737 Lignins are formed mainly from three cinnamyl alcohols.
Sinapyl alcohol 0.674 They are especially important in wood. If the most recent
theoretical analysis of lignin biosynthetic efficiency
Calculations based on YATP,sucrose = 59.5 ATP ⁄ sucrose, YATP,NADH-C =
1.5 ATP ⁄ NADH and YNADPH,sucrose  23.2 NADPH ⁄ sucrose. For (Amthor, 2003) is updated with respiratory stoichio-
cellulose, YE is given by (DHC cellulose) ⁄ (DHC sucrose – DHC fruc- metries and DHC values from above, potential YE values of
tose). For all others, YE is given by (DHC residue in polymer) ⁄ (DHC in the polymerized monomers cover the range 0.67–0.83
sucrose requirement); see Supporting Information Table S1 for DHC (Table 4).
values used. Starch results are derived from Table S10. Values for
residues are after polymerization and include (estimated) residue–
residue bond energies. For hemicelluloses, this residue–residue bond 4. Starch (long-term storage)
energy was 0.019 MJ mol)1, which was based on a comparison of
DHC values of cellulose and starch with the values for free glucose. More than one-half of seed and tuber mass can be starch,
For lignins, the residue–residue bond energy was assumed to be which is synthesized from ADP-glucose, requiring one ATP
0.015 MJ mol)1. Results for hemicellulose residues are based on
per glucose residue polymerized (Smith et al., 1997;
Tables S11–S20. Results for lignin residues are from equations S.2,
S.5, S.7, S.9, S.27, and the average of equations S.11–S.16 in Table S10). Potential YE is 0.97 (Table 4). Traditional cal-
Amthor (2003) evaluated with the respiratory stoichiometries given culations (e.g. Thornley & Johnson, 1990) involved twice
above. the ATP, resulting in smaller YE.

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 951

5. Proteins Table 5 Calculated potential efficiencies of energy use (YE) during


amino acid synthesis from sucrose, NH3 and SO4, and polymerization
Sucrose and NH3 are the designated substrates for amino into protein
acid synthesis. Herein, invertase cleaves sucrose to initiate
the process (Tables S21–S42). Cysteine synthesis also YE (J J)1)
requires sulfur; SO4 uptake and reduction costs are included Polymerized
in cysteine synthesis calculations (Table S30). Methionine, Amino acid Amino acid1 residue1
the other sulfur-containing amino acid, is made from
Alanine 0.904 0.733
cysteine (Table S41).
Arginine 0.737 0.681
Polymerization probably requires at least 4.5 ATP ⁄ Asparagine 0.755 0.649
amino acid (Zerihun et al., 1998; Amthor, 2000). With Aspartic acid 0.848 0.695
YATP,sucrose = 59.5, at least 0.42 MJ are needed per mole Cysteine 0.684 0.607
of peptide bond formed. If peptide bonds contain Glutamate 0.810 0.705
c. 0.0075 MJ mol)1 (Rawitscher et al., 1961), < 2% of the Glutamine 0.790 0.700
Glycine 0.716 0.550
energy used for polymerization is retained in the polymer. Histidine 0.718 0.656
For amino acid residues within proteins, potential YE Isoleucine 0.848 0.772
covers the range 0.55–0.81 (Table 5). Variation in amino Leucine 0.893 0.809
acid composition of the myriad plant proteins causes variation Lysine 0.864 0.787
Methionine 0.662 0.614
in whole-protein YE. For nine important plant enzymes (as
Phenylalanine 0.854 0.793
examples), potential YE values varied over the modest range Proline 0.815 0.725
0.726–0.737 (Table 6), but, for storage proteins (which can Serine 0.829 0.670
have unique compositions; Shewry et al., 1995), variation in Threonine 0.813 0.699
YE is larger (not shown). DHC also varies among proteins. Tryptophan 0.806 0.760
Tyrosine 0.852 0.789
The measured DHC values of 19 storage proteins covered the
Valine 0.910 0.805
range 22.4–24.8 MJ kg)1 (Benedict & Osborne, 1907),
whereas the calculated values for nine enzymes were in the Calculations based on YATP,sucrose = 59.5 ATP ⁄ sucrose, YATP,NADH-C =
range 24.2–25.3 MJ kg)1 (Table 6). For present purposes, 1.5 ATP ⁄ NADH and YNADPH,sucrose  23.2 NADPH ⁄ sucrose.
Polymerization cost was set to 4.5 ATP ⁄ amino acid and the peptide
protein in grasses is assigned YE = 0.73 and DHC =
bond energy content was set to 0.0075 MJ mol)1 (see text). YE is
24.5 MJ kg)1. the energy in free amino acid or amino acid residue (including
peptide bond energy) divided by the sum of energies in the sucrose
and NH3 required for their synthesis (and polymerization for resi-
6. Lipids dues). Substrate, amino acid and amino acid residue DHC values
were from Supporting Information Table S1 (amino acid and amino
Only a small fraction of most vegetative cells is lipid, but
acid residue DHC values are the same per mole and per mole carbon;
the lipid concentration of some fruits and seeds is high they differ per kilogram only to the extent that free amino acids
(Pritchard & Amthor, 2005). For 11 plant lipids, YE contain 0.018015 kg mol)1 (i.e. 1 mol H2O) more than the
covered the range 0.79–0.89 (derived from Williams et al., corresponding residue).
1
1987; Thornley & Johnson, 1990). A YE value of 0.87 , ‘Amino acid’ indicates the free monomer; ‘polymerized residue’
indicates the residue within a protein, including the ATP required for
(central tendency) is adopted as representative of lipids in
polymerization and the estimated peptide bond energy.
vegetative tissues and low-lipid seeds.
mass of minerals (related to ash remaining after combustion)
is herein assumed to be 25 g mol)1 and the minimal net
7. Organic acids
uptake cost is set to 0.75 mol ATP mol)1; this entails pas-
The free energy per carbon atom in organic acids is rela- sive uptake of some species (modified after Thornley &
tively small (Table 2). The calculated YE values of the four France, 2007). For NO3 uptake, two ATP ⁄ NO3 might be
main organic acids in plants span the range 0.86–0.96 required (Clarkson, 1985), but maximal solar-energy-use
(derived from Tables S1 and S43–S46). efficiency may occur when NH3 is the nitrogen source.

8. Minerals 9. Whole plants


Minerals make up the final ‘major’ fraction of phytomass. Phytomass composition differs among species and environ-
Their uptake from the soil solution is energetically impor- ments, causing a range of theoretical substrate requirements
tant (Clarkson, 1985), but estimates of minimal energetic (e.g. Penning de Vries et al., 1983; Poorter et al., 1997); no
requirements are rare. Variation in plant mineral content single value is appropriate for plants in general. To carry out
(Epstein, 1994) is a complication. The mean molecular the present analysis, generic compositions of C3 and C4

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
952 Review Tansley review Phytologist

Table 6 Calculated potential efficiencies of energy use (YE) during the synthesis of specific enzymes (from sucrose, NH3 and SO4) and their
heats of combustion (DHC)

Protein

Calculated result A B C D E F G H I
)1
YE (J J ) 0.737 0.726 0.730 0.729 0.731 0.731 0.729 0.735 0.733
DHC (MJ kg)1) 25.30 24.45 24.51 24.58 24.42 24.75 24.18 24.18 24.60

Whole-protein YE and DHC values were calculated by summing the amino acid residue YE values from Table 5 and the DHC values from
Supporting Information Table S1 in proportion to the amino acid composition of each protein. The protein composition was derived from the
amino acid sequences available in UniProt Consortium (2009).
Proteins: A, cytochrome c oxidase subunit 2 from maize (UniProt accession P00412); B, rubisco large subunit plus rubisco small subunit PW9
from wheat (P11383 plus P26667); C, sucrose synthase from rice (P31924); D, nitrate reductase from Petunia hybrida (Q43042); E, PEP
carboxylase 1 from maize (P04711); F, cellulose synthase A catalytic subunit 6 [UDP-forming] from Arabidopsis thaliana (Q94JQ6); G, trans-
ketolase from potato chloroplast (Q43848); H, fructose-bisphosphate aldolase from Cicer arietinum cytosol (O65735); I, chloroplastic ATP
synthase from maize with F1 subunits in the ratio a3b3cde (with d chain from Sorghum vulgare) and F0 subunits in the ratio ab2c14 (P05022,
P00827, P0C1M0, Q07300, P00835, P17344, P48186, P69449).

grain crops were formulated, resulting in potential (maxi- et al., 1987), and the biochemical composition also changes
mal) whole-plant YE values of 0.869 and 0.879, respectively (Thornley & Johnson, 1990). This may be related to sec-
(Table 7). The C3 system’s greater protein concentration ondary cell wall growth and ‘reorganization’ of structural
contributed to the C3–C4 difference. matter during development, with significant breakdown
It is notable that uncertainty about phytomass composi- and translocation (export) of structural constituents during
tion exists (in part) because measurement-based analyses of the final stage of development: senescence (Hopkins et al.,
plant make-up are typically unable to account for total mass 2007). The effect of age on composition has implications
(e.g. Williams et al., 1987; Loomis & Connor, 1992; Poorter for the definition of substrate requirement; it should be
et al., 1997). Another consideration is that older-organ based on the composition of growing cells (see Thornley &
DHC is often less than that of younger organs (e.g. Williams Johnson, 1990, p. 350–353).

Table 7 Calculated potential whole-plant YE and DHC of generic C3 and C4 grain crops

C3 C4
Plant constituent
or whole plant Fraction (kg kg)1) YE (J J)1) DHC (MJ kg)1) Fraction (kg kg)1) YE (J J)1) DHC (MJ kg)1)

Cellulose 0.250 0.993 17.345 0.260 0.993 17.345


Hemicelluloses 0.240 0.870 17.403 0.250 0.870 17.403
Lignins 0.035 0.731 27.88 0.035 0.731 27.88
Proteins 0.133 0.73 24.5 0.104 0.73 24.5
Lipids 0.020 0.87 39.3 0.020 0.87 39.3
Organic acids 0.060 0.902 10.32 0.055 0.902 10.32
Starch 0.160 0.972 17.484 0.175 0.972 17.484
Sucrose 0.022 1.0 16.487 0.023 1.0 16.487
Hexoses 0.020 0.995 15.585 0.023 0.995 15.585
Minerals 0.060 – – 0.055 – –
Whole plant 1.000 0.869 17.64 1.000 0.879 17.55

Columns labeled ‘fraction’ specify the contributions of individual constituents (i.e. compounds, classes of compound or minerals) to whole-
plant dry mass. Values for whole-plant YE are whole-plant DHC divided by DHC of the weighted sum of sucrose (and NH3) requirements for
each component. The composition was formulated based on Penning de Vries et al. (1983), Lafitte & Loomis (1988) and Loomis & Connor
(1992) for a mixture of vegetative and reproductive phytomass; that is the composition is integrated over vegetative and reproductive growth
periods with significant production of starch in seeds. The biosynthetic substrates were sucrose, NH3 and SO4; YATP,sucrose was 59.5
ATP ⁄ sucrose, YATP,NADH-C was 1.5 ATP ⁄ NADH and YNADPH,sucrose was c. 23.2 NADPH ⁄ sucrose. Hemicellulose was taken to be 30% arabi-
nose, 45% xylose, 10% glucose, 7% glucuronate, 6% methylated glucuronate and 2% mannose residues (based on data summarized in
Scheller & Ulvskov, 2010). Lignin was taken to be 20% p-coumaryl alcohol, 40% coniferyl alcohol and 40% sinapyl alcohol residues. The
organic acid fraction was taken to be 30% aconitic acid, 30% citric acid, 20% malic acid and 20% oxaloacetic acid. Hexoses were a 1 : 1 mix
of glucose and fructose. Minerals were assumed to have a mean molecular mass of 0.025 kg mol)1 and an uptake cost of
0.75 mol ATP mol)1 (see text), and so 0.504 mol sucrose was oxidized per kilogram of mineral taken up.

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 953

IX. From sunlight to phyto-energy: potential inactive absorption, C4 overcycling and photorespiration in
overall efficiency the present analysis. All these processes occur in extant
plants (a criterion for this review), whereas Zhu et al.
1. Theoretical efficiency (2008) targeted the maximum conceivable efficiency for C4
systems.
The multiplication of component efficiencies gives whole-
plant potential solar-energy-use efficiencies (Table 8) –
updates of Fig. 1(a). With respect to incident total solar 2. Measured efficiency
radiation and 350 ppm atmospheric [CO2], the calculated Analyses by Loomis & Gerakis (1975) and Monteith
potential solar-energy-use efficiency of the generic C3 grain (1978) among others showed that the maximal growth rates
crop was 0.041 J J)1 at 30C and 0.053 J J)1 at 20C of actual C4 systems are c. 40% faster than those of actual
(Table 8). The potential efficiency was 0.051 J J)1 for the C3 systems. Can this be reconciled with the present calcula-
C4 grain crop (Table 8), which was assumed to be indepen- tions of minimal C3 and C4 quantum requirements? Only
dent of temperature. If PAR is 48% of total solar radiation for photosynthesis at a temperature above 30C (with
and 93% of incident PAR is absorbed by a canopy, the atmospheric [CO2] of c. 350 ppm), because only then is the
potential solar-energy-use efficiency is 2.24 times greater on minimal C4 quantum requirement far superior to (less
an absorbed PAR basis relative to incident total solar radia- than) that of C3 systems (Fig. 3). This view is consistent
tion. This applies to both C3 and C4 systems if both systems with the measured low-light quantum use in a range of C3
absorb equal fractions of PAR. Relative to absorbed PAR, and C4 species, albeit with variation in the ‘crossover
therefore, potential efficiencies of the hypothetical C3 sys- temperature’ (e.g. Ehleringer & Björkman, 1977; Ehleringer
tem were 0.092 J J)1 (at 30C) and 0.118 J J)1 (at 20C), & Pearcy, 1983). It indicates that factors other than (in
and that of the C4 system was 0.114 J J)1. The hypothetical addition to) quantum requirement are responsible for C3–
C4 system was potentially 23% more efficient than the C3 C4 growth rate differences, probably including faster light-
system at 30C, but, at 20C, the C3 system could be mar- saturated C4 photosynthesis.
ginally more efficient. At greater [CO2], the efficiency of How do theoretical estimates of potential solar-energy-
the C3 (but not C4) system increases. use efficiency derived here (Table 8) compare with field
At 30C, the C3 plant efficiency based on absorbed PAR measurements of, in particular, productive plant communi-
was 12% smaller than the estimate in Zhu et al. (2008) ties? For C3 systems in the field, efficiencies relative to inci-
(Table 9). Much of this difference was a result of inactive dent total solar radiation of 0.032 J J)1 (rice), 0.044 J J)1
absorption of PAR in the present analysis; Zhu et al. (2008) (soybean) and 0.045 J J)1 (sugarbeet [Beta vulgaris]) were
used 90% PAR absorption (rather than 93% in the present reported (Loomis & Gerakis, 1975). The rice value is c.
analysis), but ignored inactive absorption. A small contribu- 78% of the calculated potential C3 grain crop value at
tion to the difference arose from the 380 (rather than 350) 30C, whereas the last two values exceed the potential calcu-
ppm [CO2] used by Zhu et al. (2008). The present absorbed lated for 30C, but are c. 85% of the theoretical potential at
PAR-based C4 plant potential efficiency was 17% smaller 20C. These actual C3 crops were grown in atmospheres
than in Zhu et al. (2008), which was a result of inclusion of with slightly lower [CO2] values, and therefore modestly

Table 8 Potential solar-energy-use efficiency of generic C3 and C4 grain crops

‘Process’ YE (J J)1)

C3 C4

‘Process’ linking incident total solar irradiance to production of new phyto-energy 20C 30C

Photosynthetically active radiation (PAR) fraction of incident total solar radiation 0.48 0.48 0.48
Canopy absorption of PAR 0.93 0.93 0.93
Fraction of PAR absorption by photosynthetic pigments 0.92 0.92 0.92
Photosynthesis (with photorespiration) 0.178 0.140 0.165
Photosynthate mobilization ⁄ translocation 0.973 0.973 0.973
Maintenance respiration 0.85 0.85 0.88
Efficiency of growth 0.869 0.869 0.879
Total (per unit incident total solar radiation) 0.0525 0.0412 0.0509
Total (per unit absorbed PAR) 0.1177 0.0924 0.1140

All incident solar radiation was assumed to be intercepted and photosynthesis (minus photorespiration) produced 30% starch and 70%
sucrose. Atmospheric [CO2] was 350 ppm.

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
954 Review Tansley review Phytologist

Table 9 Theoretical (quantum-based) estimates of potential solar-energy-use efficiency

Potential efficiency (J J)1)

Incident total solar radiation basis Absorbed PAR basis

C3 system C4 system C3 system C4 system Notes Source

0.053 0.12 (1) A


0.059 0.14 (2) A
0.037–0.044 0.050–0.058 0.093–0.098 0.125–0.129 (3) B
0.032 0.068 (4) C
0.043 0.091 (5) D
0.051 0.060 0.118 0.139 (6) E
0.046 0.060 0.105 0.137 (7) F
0.053 0.118 20C This review
0.041 0.051 0.092 0.114 30C This review

Complete interception of incident solar radiation was assumed in all cases, but a range of assumptions were made about the fraction of photo-
synthetically active radiation (PAR) in solar radiation, absorption (and inactive absorption) of PAR, and respiration : photosynthesis ratio or
growth and maintenance requirements.
Notes: (1), Analysis conducted before adequate understanding of photorespiration and the metabolic differences between C3 and C4 plants. A
10-photon ⁄ CO2 quantum requirement was used. (2), Modified herein to account for differences in DHC of photosynthate and ash-free phyto-
mass (see Fig. 1 and discussion in Loomis & Williams, 1963). (3), Based on quantum requirement of eight photon ⁄ CO2 for both C3 and C4
photosyntheses, vO ⁄ vC = 0.5 in C3 plants (0 in C4 plants), 25% loss of photosynthate (photosynthesis less photorespiration) to growth respira-
tion and 25% loss of photosynthate to maintenance respiration. (4), A ‘practical estimate of maximum’ solar-energy-use efficiency accounting
for photorespiration, unavoidable light saturation of photosynthesis at 350 ppm atmospheric [CO2] (quantum requirement of 20
photon ⁄ CO2) and DHC of 17 MJ kg)1. (5), For a quantum requirement of 15.4 photon ⁄ CO2 (an empirical ratio including inactive absorption,
photorespiration and C4 overcycling), yield of the growth processes of 0.74 and DHC of 17.6 MJ kg)1. (6), At 25C. The C4 estimate is for
vO ⁄ vC = 0 and without C4 overcycling. (7), At 30C. The C4 estimate is for vO ⁄ vC = 0 and without C4 overcycling.
Sources: A, Loomis & Williams (1963); B, Beadle & Long (1985); C, Loomis & Amthor (1996); D, Loomis & Amthor (1999); E, Long et al.
(2006); F, Zhu et al. (2008).

larger quantum requirements, than used in the potential 68% of the presently calculated potential). Based on these
efficiency calculations. cursory comparisons, exceptional C3 and C4 plant commu-
Efficiencies of actual C4 systems, again relative to inci- nities may achieve a significant fraction of their potential
dent total solar radiation, of 0.042 J J)1 (Pennisetum solar-energy-use efficiencies.
typhoides) and 0.046 J J)1 (maize) were reported (Loomis
& Gerakis, 1975). The efficiency of 0.046 J J)1 is 90% of
3. Respiration : photosynthesis ratio
the presently derived theoretical maximal value (see
Table 8) and 77% of the maximum potential efficiency Respiration : photosynthesis ratios of 0.30 (Zhu et al.,
given by Zhu et al. (2008). 2008), 0.33 (Loomis & Williams, 1963) and 0.40
It is noteworthy that the maximum growth rate of the (Monteith, 1977; Long et al., 2006) have been used to esti-
maize crop mentioned by Loomis & Gerakis (1975) was mate potential efficiency. Finer distinctions recognizing
68% faster than the sugarbeet growth rate, but the solar- maintenance and growth respiratory components, with the
energy-use efficiencies were the same. Decoupling between growth component on mechanistic grounds, were also used,
solar-energy-use efficiency and growth rate is related, at least with resulting respiration : photosynthesis ratios of 0.30
partially, to different amounts of incident solar radiation. (Loomis & Amthor, 1996; at a C3 quantum requirement of
More recently, the measured efficiency of Miscanthus · 15 photon ⁄ CO2), 0.36 (Loomis & Amthor, 1999; at a C4
giganteus (C4), with a whole-plant DHC of c. 18 MJ kg)1, quantum requirement of 16 photon ⁄ CO2) and 0.50
was c. 0.78 J J)1 intercepted PAR (Beale & Long, 1995). (Beadle & Long, 1985). Ratios derived from the present
That is c. 68% of the presently estimated theoretical poten- analysis (Table 8) were 0.28 (C3 system) and 0.25 (C4 sys-
tial on an absorbed PAR basis (Table 8), and c. 57% of the tem), but these were free energy loss fractions of photosyn-
potential estimated by Zhu et al. (2008). In intensively thate, not CO2 losses. The carbon loss fractions were larger
managed maize, c. 3.8 g of above-ground phytomass accu- because phytomass is more reduced than photosynthate. All
mulated per MJ absorbed PAR (Lindquist et al., 2005). If of these previous and present values were based on CO2
allowance is made for 15% root mass (Anderson, 1988) and exchange measurements of crops, or were calculations based
whole-plant DHC of 17.5 MJ kg)1 (Lieth, 1968), the effi- on crop-plant composition. Different values may occur for
ciency was c. 0.078 J J)1 relative to absorbed PAR (again c. other plants, such as woody perennials.

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 955

X. Assessment Amthor JS. 1994. Respiration and carbon assimilate use. In: Boote KJ,
Bennett JM, Sinclair TR, Paulsen GM, eds. Physiology and determination
Analyses of potential solar-energy-use efficiency based on of crop yield. Madison, WI, USA: American Society of Agronomy, 221–
theoretically minimal quantum requirements – this review’s 250.
Amthor JS. 2000. The McCree–de Wit–Penning de Vries–Thornley
subject – make no allowance for light saturation of photo-
respiration paradigms: 30 years later. Annals of Botany 86: 1–20.
synthesis, although it is expected in nature (Monteith, Amthor JS. 2003. Efficiency of lignin biosynthesis: a quantitative analysis.
1977). Moreover, assessments of upper limits on solar- Annals of Botany 91: 673–695.
energy-use efficiency involve quantitative uncertainties Amthor JS, Mitchell RJ, Runion GB, Rogers HH, Prior SA, Wood CW.
about the potential efficiencies of processes underlying the 1994. Energy content, construction cost and phytomass accumulation of
Glycine max (L.) Merr. and Sorghum bicolor (L.) Moench grown in
transduction of solar radiation into phyto-energy. Indeed,
elevated CO2 in the field. New Phytologist 128: 443–450.
as more processes are considered, and in more detail, overall Anderson EL. 1988. Tillage and N fertilization effects on maize root
uncertainty can increase, which is a trait of research in growth and root : shoot ratio. Plant and Soil 108: 245–251.
complex systems. In this light, the following points are sug- Asada K. 1999. The water–water cycle in chloroplasts: scavenging of active
gested as key uncertainties and research needs: oxygens and dissipation of excess photons. Annual Review of Plant
Physiology and Plant Molecular Biology 50: 601–639.
• The fraction of PAR in solar radiation is place and time
von Ballmoos C, Wiedenmann A, Dimroth P. 2009. Essentials for ATP
specific. synthesis by F1F0 ATP synthases. Annual Review of Biochemistry 78:
• The amount of inactive PAR absorption is unclear, par- 649–672.
ticularly at the canopy scale (senescing and dead leaves, Beadle CL, Long SP. 1985. Photosynthesis – is it limiting to biomass
stems, and reproductive tissue, when present, probably production? Biomass 8: 119–168.
Beale CV, Long SP. 1995. Can perennial C4 grasses attain high efficiencies
always contribute to whole-plant inactive absorption).
of radiant energy conversion in cool climates? Plant, Cell & Environment
• Although a photophosphorylative H+ ⁄ ATP ratio of 18: 641–650.
14 ⁄ 3 may have a ‘mechanistic’ basis, it gives rise to appar- Beevers H. 1961. Respiratory metabolism in plants. Evanston, IL, USA:
ently unrealistic quantum requirements when coupled with Row, Peterson & Company.
the presently assumed stoichiometry between photon Beevers H. 1970. Respiration in plants and its regulation. In: Šetlı́k I, ed.
Prediction and measurement of photosynthetic productivity. Wageningen,
absorption and proton deposition in the thylakoid lumen.
the Netherlands: Centre for Agricultural Publishing and
Resolving this issue may be important. Documentation, 209–214.
• If the mechanistic 14 ⁄ 3 photophosphorylative H+ ⁄ ATP Beevers L, Hageman RH. 1969. Nitrate reduction in higher plants.
stoichiometry is incorrect, so too might be the 10 ⁄ 3 mecha- Annual Review of Plant Physiology 20: 495–522.
nistic H+ ⁄ ATP ratio for oxidative phosphorylation. van Bel AJE. 2003. The phloem, a miracle of ingenuity. Plant, Cell &
Environment 26: 125–149.
• Photorespiration and mitochondrial alternative oxidase
Benedict FG, Osborne TB. 1907. The heat of combustion of vegetable
remain enigmas. They divert energy away from useful reac- proteins. Journal of Biological Chemistry 3: 119–133.
tions, but may benefit plants. How much benefit is an Bernacchi CJ, Singsaas EL, Pimentel C, Portis AR Jr, Long SP. 2001.
unanswered question. Improved temperature response functions for models of rubisco-limited
• The theoretically minimal degree of C4 overcycling photosynthesis. Plant, Cell & Environment 24: 253–259.
Berry EA, Hinkle PC. 1983. Measurements of the electrochemical proton
remains unclear.
gradient in submitochondrial particles. The Journal of Biological
• The quantification of a theoretically minimal mainte- Chemistry 258: 1474–1486.
nance requirement is problematic and is a key contributor Berry S, Rumberg B. 1999. Proton to electron stoichiometry in electron
to uncertainty about potential solar-energy-use efficiency. transport of spinach thylakoids. Biochimica et Biophysica Acta 1410:
• Exceptional plant communities may achieve a signifi- 248–261.
Björkman O, Demmig B. 1987. Photon yield of O2 evolution and
cant portion of their potential solar-energy-use efficiency,
chlorophyll fluorescence characteristics at 77 K among vascular plants of
but additional field-based measurements of incident (and diverse origins. Planta 170: 489–504.
absorbed) solar radiation and resulting phyto-energy accu- Bonner J. 1962. The upper limit of crop yield. Science 137: 11–15.
mulation are needed to better understand differences Bouma TJ, de Visser R, van Leeuwen PH, de Kock MJ, Lambers H.
between potential and actual solar-energy-use efficiencies. 1995. The respiratory energy requirements involved in nocturnal
carbohydrate export from starch-storing mature source leaves and their
contribution to leaf dark respiration. Journal of Experimental Botany 46:
Acknowledgements 1185–1194.
Bowes G, Ogren WL. 1972. Oxygen inhibition and other properties of
Thanks to Don Ort for helpful dialog, Bob Loomis for dec- soybean ribulose 1,5-diphosphate carboxylase. The Journal of Biological
ades of encouragement, and two anonymous referees for Chemistry 247: 2171–2176.
Brand MD. 2005. The efficiency and plasticity of mitochondrial energy
important suggestions.
transduction. Biochemical Society Transactions 33: 897–904.
Britton CM, Dodd JD. 1976. Relationships of photosynthetically active
References radiation and shortwave irradiance. Agricultural Meteorology 17: 1–7.
von Caemmerer S. 2000. Biochemical models of leaf photosynthesis.
Allen JF. 2003. Cyclic, pseudocyclic and noncyclic photophosphorylation: Collingwood, Australia: CSIRO Publishing.
new links in the chain. Trends in Plant Science 8: 15–19.

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
956 Review Tansley review Phytologist

Chia T, Thorneycroft D, Chapple A, Messerli G, Chen J, Zeeman SC, Hatch MD, Agostino A, Jenkins CLD. 1995. Measurement of the leakage
Smith SM, Smith AM. 2004. A cytosolic glucosyltransferase is required of CO2 from bundle-sheath cells of leaves during C4 photosynthesis.
for conversion of starch to sucrose in Arabidopsis leaves at night. Plant Plant Physiology 108: 173–181.
Journal 37: 853–863. Heldt H-W. 2005. Plant biochemistry. Amsterdam, the Netherlands:
Clarkson DT. 1985. Factors affecting mineral nutrient acquisition by Elsevier.
plants. Annual Review of Plant Physiology 36: 77–115. Hell R. 1997. Molecular physiology of plant sulfur metabolism. Planta
Day DA, Krab K, Lambers H, Moore AL, Siedow JN, Wagner AM, 202: 138–148.
Wiskich JT. 1996. The cyanide-resistant oxidase: to inhibit or not to Hinkle PC. 2005. P ⁄ O ratios of mitochondrial oxidative phosphorylation.
inhibit, that is the question. Plant Physiology 110: 1–2. Biochimica et Biophysica Acta 1706: 1–11.
Dekker JP, Boekema EJ. 2005. Supramolecular organization of thylakoid Hinkle PC, Kumar MA, Resetar A, Harris DL. 1991. Mechanistic
membrane proteins in green plants. Biochimica et Biophysica Acta 1706: stoichiometry of mitochondrial oxidative phosphorylation. Biochemistry
12–39. 30: 3576–3582.
Dohleman FG, Long SP. 2009. More productive than maize in Hipps LE, Asrar G, Kanemasu ET. 1983. Assessing the interception of
the Midwest: how does Miscanthus do it? Plant Physiology 150: 2104– photosynthetically active radiation in winter wheat. Agricultural
2115. Meteorology 28: 253–259.
Douce R, Neuburger M. 1989. The uniqueness of plant mitochondria. Hopkins M, Taylor C, Liu Z, Ma F, McNamara L, Wang T-W,
Annual Review of Plant Physiology and Plant Molecular Biology 40: 371– Thompson JE. 2007. Regulation and execution of molecular disassembly
414. and catabolism during senescence. New Phytologist 175: 201–214.
Ehleringer J, Björkman O. 1977. Quantum yields for CO2 uptake in C3 Johnson GN. 2005. Cyclic electron transport in C3 plants: fact or artefact?
and C4 plants. Plant Physiology 59: 86–90. Journal of Experimental Botany 56: 407–416.
Ehleringer J, Pearcy RW. 1983. Variation in quantum yield for CO2 Joliot P, Joliot A. 2002. Cyclic electron transfer in plant leaf. Proceedings of
uptake among C3 and C4 plants. Plant Physiology 73: 555–559. the National Academy of Sciences, USA 99: 10209–10214.
Emerson R. 1958. The quantum yield of photosynthesis. Annual Review of Kanai R, Edwards GE. 1999. The biochemistry of C4 photosynthesis. In:
Plant Physiology 9: 1–24. Sage RF, Monson RK, eds. C4 plant biology. San Diego, CA, USA:
Epstein E. 1994. The anomaly of silicon in plant biology. Proceedings of Academic Press, 49–87.
the National Academy of Sciences, USA 91: 11–17. Kebeish R, Niessen M, Thiruveedhi K, Bari R, Hirsch H-J, Rosenkranz
Evans JR. 1987. The dependence of quantum yield on wavelength and R, Stäbler N, Schönfeld B, Kreuzaler F, Peterhänsel C. 2007.
growth irradiance. Australian Journal of Plant Physiology 14: 69–79. Chloroplastic photorespiratory bypass increases photosynthesis and
Farquhar GD, von Caemmerer S. 1982. Modelling of photosynthetic biomass production in Arabidopsis thaliana. Nature Biotechnology 25:
response to environmental conditions. In: Lange OL, Noble PS, 593–599.
Osmond CB, Ziegler H, eds. Physiological plant ecology II. Berlin, Lafitte HR, Loomis RS. 1988. Growth and composition of grain sorghum
Germany: Springer-Verlag, 549–587. with limited nitrogen. Agronomy Journal 80: 492–498.
Ferguson SJ, Sorgato MC. 1982. Proton electrochemical gradients and Laisk A, Edwards GE. 2000. A mathematical model of C4 photosynthesis:
energy-transduction processes. Annual Review of Biochemistry 51: 185– the mechanism of concentrating CO2 in NADP-malic enzyme type
217. species. Photosynthesis Research 66: 199–224.
Florez-Sarasa ID, Bouma TJ, Medrano H, Azcon-Bieto J, Ribas-Carbo LaNoue KF, Schoolwerth AC. 1979. Metabolite transport in
M. 2007. Contribution of the cytochrome and alternative pathways to mitochondria. Annual Review of Biochemistry 48: 871–922.
growth respiration and maintenance respiration in Arabidopsis thaliana. Lawlor DW. 2001. Photosynthesis, 3rd edn. New York, NY, USA:
Physiologia Plantarum 129: 143–151. Springer-Verlag.
Galkin A, Dröse S, Brandt U. 2006. The proton pumping stoichiometry Lieth H. 1968. The measurement of calorific values of biological material
of purified mitochondrial complex I reconstituted into proteoliposomes. and the determination of ecological efficiency. In: Eckardt FE, ed.
Biochimica et Biophysica Acta 1757: 1575–1581. Functioning of terrestrial ecosystems at the primary production level. Paris,
Gary C, Frossard JS, Chenevard D. 1995. Heat of combustion, degree of France: UNESCO, 233–242.
reduction and carbon content: 3 interrelated methods of estimating the Lindquist JL, Arkebauer TJ, Walters DT, Cassman KG, Dobermann A.
construction cost of plant tissues. Agronomie 15: 59–69. 2005. Maize radiation use efficiency under optimal growth conditions.
Gifford RM. 1995. Whole plant respiration and photosynthesis of wheat Agronomy Journal 97: 72–78.
under increased CO2 concentration and temperature: long-term vs. Long FL. 1934. Application of calorimetric methods to ecological research.
short-term distinctions for modelling. Global Change Biology 1: 385– Plant Physiology 9: 323–337.
396. Long SP, Ainsworth EA, Rogers A, Ort DR. 2004. Rising atmospheric
Golley FB. 1969. Caloric value of wet tropical forest vegetation. Ecology carbon dioxide: plants face the future. Annual Review of Plant Biology
50: 517–519. 55: 591–628.
Gower ST, Frederick DJ, Clark A III. 1984. Distribution of energy in Long SP, Zhu X-G, Naidu SL, Ort DR. 2006. Can improvement in
different-aged southeastern bottomland forests. Forest Ecology and photosynthesis increase crop yields? Plant, Cell & Environment 29: 315–
Management 9: 127–146. 330.
Gueymard C. 1995. SMARTS, a simple model of the atmospheric radiative Loomis RS, Amthor JS. 1996. Limits to yield revisited. In: Reynolds MP,
transfer of sunshine: algorithms and performance assessment. Professional Rajaram S, McNab A, eds. Increasing yield potential in wheat: breaking
paper FSEC-PF-270-95. Cocoa, FL, USA: Florida Solar Energy Center. the barriers. Mexico City, Mexico, D. F.: CIMMYT, 76–89.
Gueymard C. 2001. Parameterized transmittance model for direct beam Loomis RS, Amthor JS. 1999. Yield potential, plant assimilatory capacity,
and circumsolar spectral irradiance. Solar Energy 71: 325–346. and metabolic efficiencies. Crop Science 39: 1584–1596.
Gueymard C. 2004. The sun’s total and spectral irradiance for solar energy Loomis RS, Connor DJ. 1992. Crop ecology. Cambridge, UK: Cambridge
applications and solar radiation models. Solar Energy 76: 423–453. University Press.
Hatch MD. 1987. C4 photosynthesis: a unique blend of modified Loomis RS, Gerakis PA. 1975. Productivity of agricultural ecosystems. In:
biochemistry, anatomy and ultrastructure. Biochimica et Biophysica Acta Cooper JP, ed. Photosynthesis and productivity in different environments.
895: 81–106. Cambridge, UK: Cambridge University Press, 145–172.

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 957

Loomis RS, Williams WA. 1963. Maximum crop productivity: an Penning de Vries FWT, Brunsting AHM, van Laar HH. 1974. Products,
estimate. Crop Science 3: 67–72. requirements and efficiency of biosynthesis: a quantitative approach.
Lunn JE, Furbank RT. 1999. Sucrose biosynthesis in C4 plants. New Journal of Theoretical Biology 45: 339–377.
Phytologist 143: 221–237. Penning de Vries FWT, van Laar HH, Chardon MCM. 1983.
McCree KJ. 1972a. The action spectrum, absorptance and quantum Bioenergetics of growth of seeds, fruits and storage organs. In: Smith
yield of photosynthesis in crop plants. Agricultural Meteorology 9: WH, Banta SJ, eds. Potential productivity of field crops under different
191–216. environments. Los Baños, Philippines: International Rice Research
McCree KJ. 1972b. Test of current definitions of photosynthetically active Institute, 37–59.
radiation against leaf photosynthesis data. Agricultural Meteorology 10: Piques M, Schulze WX, Höhne M, Usadel B, Gibon Y, Rohwer J, Stitt
443–453. M. 2009. Ribosome and transcript copy numbers, polysome occupancy
McCree KJ. 1981. Photosynthetically active radiation. In: Lange OL, and enzyme dynamics in Arabidopsis. Molecular Systems Biology 5: 314.
Nobel PS, Osmond CB, Ziegler H, eds. Physiological plant ecology I. Poorter H, van Berkel Y, Baxter R, den Hertog J, Dijkstra P, Gifford
Berlin, Germany: Springer-Verlag, 41–55. RM, Griffin KL, Roumet C, Roy J, Wong SC. 1997. The effect of
McCree KJ, Keener ME. 1974. Effect of atmospheric turbidity on elevated CO2 on the chemical composition and construction costs of
the photosynthetic rates of leaves. Agricultural Meteorology 13: 349– leaves of 27 C3 species. Plant, Cell & Environment 20: 472–482.
357. Pritchard SG, Amthor JS. 2005. Crops and environmental change. New
Millar AH, Atkin OK, Menz RI, Henry B, Farquhar G, Day DA. 1998. York, NY, USA: Food Products Press.
Analysis of respiratory chain regulation in roots of soybean seedlings. Raven JA. 1985. Regulation of pH and generation of osmolarity in
Plant Physiology 117: 1083–1093. vascular plants: a cost–benefit analysis in relation to efficiency of use of
Monteith JL. 1972. Solar radiation and productivity in tropical energy, nitrogen and water. New Phytologist 101: 25–77.
ecosystems. Journal of Applied Ecology 9: 747–766. Rawitscher M, Wadsö I, Sturtevant JM. 1961. Heats of hydrolysis of
Monteith JL. 1977. Climate and the efficiency of crop production in peptide bonds. Journal of the American Chemical Society 83: 3180–
Britain. Philosophical Transactions of the Royal Society of London B 281: 3184.
277–294. Rennie EA, Turgeon R. 2009. A comprehensive picture of phloem loading
Monteith JL. 1978. Reassessment of maximum growth rates for C3 and C4 strategies. Proceedings of the National Academy of Sciences, USA 106:
crops. Experimental Agriculture 14: 1–5. 14162–14167.
Munekage Y, Hashimoto M, Miyake C, Tomizawa K-I, Endo T, Tasaka Reynolds MP, van Ginkel M, Ribaut J-M. 2000. Avenues for genetic
M, Shikanai T. 2004. Cyclic electron flow around photosystem I is modifications of radiation use efficiency in wheat. Journal of
essential for photosynthesis. Nature 429: 579–582. Experimental Botany 51: 459–473.
Murchie EH, Pinto M, Horton P. 2009. Agriculture and the Ridley BL, O’Neill MA, Mohnen D. 2001. Pectins: structure,
new challenges for photosynthesis research. New Phytologist 181: 532– biosynthesis, and oligogalacturonide-related signaling. Phytochemistry
552. 57: 929–967.
Nelson CJ. 1994. Apparent respiration and plant productivity. In: Boote Robson CA, Vanlerberghe GC. 2002. Transgenic plant cells lacking
KJ, Bennett JM, Sinclair TR, Paulsen GM, eds. Physiology and mitochondrial alternative oxidase have increased susceptibility to
determination of crop yield. Madison, WI, USA: American Society of mitochondria-dependent and -independent pathways of programmed
Agronomy, 251–258. cell death. Plant Physiology 129: 1908–1920.
Nelson N, Yocum CF. 2006. Structure and function of photosystems I Sacksteder CA, Kanazawa A, Jacoby ME, Kramer DM. 2000. The proton
and II. Annual Review of Plant Biology 57: 521–565. to electron stoichiometry of steady-state photosynthesis in living plants:
Nicholls DG, Ferguson SJ. 1992. Bioenergetics 2. London, UK: Academic a proton-pumping Q cycle is continuously engaged. Proceedings of the
Press. National Academy of Sciences, USA 97: 14283–14288.
Noctor G, Foyer CH. 1998. A re-evaluation of the ATP:NADPH budget Scheller HV, Ulvskov P. 2010. Hemicelluloses. Annual Review of Plant
during C3 photosynthesis: a contribution from nitrate assimilation and Biology 61: 263–289.
its associated respiratory activity? Journal of Experimental Botany 49: Seelert H, Poetsch A, Dencher NA, Engel A, Stahlberg H, Müller DJ.
1895–1908. 2000. Proton-powered turbine of a plant motor. Nature 405: 418–419.
Noguchi K, Go C-S, Miyazawa S-I, Terashima I, Ueda S, Yoshinari T. Shewry PR, Napier JA, Tatham AS. 1995. Seed storage proteins:
2001. Costs of protein turnover and carbohydrate export in leaves structures and biosynthesis. The Plant Cell 7: 945–956.
of sun and shade species. Australian Journal of Plant Physiology 28: Shinano T, Osaki M, Komatsu K, Tadano T. 1993. Comparison of
37–47. production efficiency of the harvesting organs among field crops. Soil
Orellana A, Neckelmann G, Norambuena L. 1997. Topography and Science & Plant Nutrition 39: 269–280.
function of Golgi uridine-5¢-diphosphate from pea stems. Plant Slewinski TL, Braun DM. 2010. The psychedelic genes of maize
Physiology 114: 99–107. redundantly promote carbohydrate export from leaves. Genetics 185:
Ort DR, Yocum CF, eds. 1996. Oxygenic photosynthesis: the light reactions. 221–232.
Dordrecht, the Netherlands: Kluwer. Smith AM, Denyer K, Martin C. 1997. The synthesis of the starch
Papa S, Francavilla A, Paradies G, Meduri B. 1971. The transport of granule. Annual Review of Plant Physiology and Plant Molecular Biology
pyruvate in rat liver mitochondria. FEBS Letters 12: 285–288. 48: 67–87.
Pate JS, Layzell DB. 1990. Energetics and biological costs of nitrogen Smith AM, Zeeman SC, Smith SM. 2005. Starch degradation. Annual
assimilation. In: Miflin BF, Lea PJ, eds. The biochemistry of plants, vol. Review of Plant Biology 56: 73–98.
16, intermediary nitrogen metabolism. San Diego, CA, USA: Academic Somerville C. 2006. Cellulose synthesis in higher plants. Annual Review of
Press, 1–42. Cell and Developmental Biology 22: 53–78.
Patrick JW. 1997. Phloem unloading: sieve element unloading and post- Steigmiller S, Turina P, Gräber P. 2008. The thermodynamic H+ ⁄ ATP
sieve element transport. Annual Review of Plant Physiology and Plant ratios of the H+-ATP synthases from chloroplasts and Escherichia coli.
Molecular Biology 48: 191–222. Proceedings of the National Academy of Sciences, USA 105: 3745–3750.
Penning de Vries FWT. 1975. The cost of maintenance processes in plant Stock D, Leslie AGW, Walker JE. 1999. Molecular architecture of the
cells. Annals of Botany 39: 77–92. rotary motor in ATP synthase. Science 286: 1700–1705.

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com
New
958 Review Tansley review Phytologist

Thornley JHM, France J. 2007. Mathematical models in agriculture, 2nd Zhu X-G, Long SP, Ort DR. 2010. Improving photosynthetic
edn. Wallingford, UK: CABI. efficiency for greater yield. Annual Review of Plant Biology 61:
Thornley JHM, Johnson IR. 1990. Plant and crop modeling. Oxford, UK: 235–261.
Oxford University Press. Ziegler H. 1975. Nature of transported substances. In: Zimmermann
Trumpower BL. 1990. The protonmotive Q cycle. The Journal of MH, Milburn JA, eds. Transport in plants I. Berlin, Germany: Springer-
Biological Chemistry 265: 11409–11412. Verlag, 59–100.
Turina P, Samoray D, Gräber P. 2003. H+ ⁄ ATP ratio of proton
transport-coupled ATP synthesis and hydrolysis catalysed by CF0F1–
liposomes. The EMBO Journal 22: 418–426. Supporting Information
UniProt Consortium. 2009. The Universal Protein Resource (UniProt) in
2010. Nucleic Acids Research 38: D142–D148. Additional supporting information may be found in the
Van Walraven HS, Strotmann H, Schwarz O, Rumberg B. 1996. The online version of this article.
H+ ⁄ ATP coupling ratio of the ATP synthase from thiol-modulated
chloroplasts and two cyanobacterial strains is four. FEBS Letters 379: Table S1 Heats of combustion of substrates and products,
309–313.
Vanlerberghe GC, McIntosh L. 1997. Alternative oxidase: from gene to
including monomer residues within polymers
function. Annual Review of Plant Physiology and Plant Molecular Biology
48: 703–734. Table S2 (a) Reaction set for C3 photosynthesis of fructose
de Veau EJ, Burris JE. 1989. Photorespiratory rates in wheat and 6-P; (b) reaction set for C3 photosynthesis of sucrose; (c)
maize as determined by 18O-labeling. Plant Physiology 90: 500– reaction set for C3 photosynthesis of starch
511.
Vollmar M, Schlieper D, Winn M, Büchner C, Groth G. 2009.
Structure of the c14 rotor ring of the proton translocating chloroplast Table S3 (a) Reaction set for photorespiration; (b) reaction
ATP synthase. The Journal of Biological Chemistry 284: 18228– set for photorespiration modified to conserve energy
18235.
Walker DA, Osmond CB. 1986. Measurement of photosynthesis Table S4 Relating quantum requirement to the balance of
in vivo with a leaf disc electrode: correlations between light
dependence of steady-state photosynthetic O2 evolution and
photosynthesis and photorespiration
chlorophyll a fluorescence transients. Proceedings of the Royal Society
of London B 227: 267–280. Table S5 Reaction set for the C4 cycle in NADP-malic
Warren Wilson J. 1967. Ecological data on dry-matter production by enzyme-type C4 species
plants and plant communities. In: Bradley EF, Denmead OT, eds. The
collection and processing of field data. New York, NY, USA: John Wiley
& Sons, 77–123.
Table S6 (a) Reaction set for glycolysis initiated by invert-
Weise SE, Weber APM, Sharkey TD. 2004. Maltose is the major ase; (b) reaction set for glycolysis initiated by sucrose
form of carbon exported from the chloroplast at night. Planta 218: synthase
474–482.
Wikström M. 2000. Proton translocation by cytochrome c oxidase: a Table S7 Reaction set for the TCA cycle within the mito-
rejoinder to recent criticism. Biochemistry 39: 3515–3519.
Williams K, Percival F, Merino J, Mooney HA. 1987. Estimation of
chondrial matrix
tissue construction cost from heat of combustion and organic nitrogen
content. Plant, Cell & Environment 10: 725–734. Table S8 (a) Reaction set for ‘closed cycle’ of oxidative pen-
Wingler A, Lea PJ, Quick WP, Leegood RC. 2000. Photorespiration: tose phosphate pathway initiated by invertase; (b) reaction
metabolic pathways and their role in stress protection. set for ‘closed cycle’ of oxidative pentose phosphate pathway
Philosophical Transactions of the Royal Society of London B 355: 1517–
1529.
initiated by sucrose synthase
Wolf S, Mouille G, Pelloux J. 2009. Homogalacturonan
methyl-esterification and plant development. Molecular Plant 2: 851– Table S9 Reaction set for mobilization of chloroplastic
860. starch and its conversion to sucrose
Wulff C, Norambuena L, Orellana A. 2000. GDP-fucose uptake into the
Golgi apparatus during xyloglucan biosynthesis requires the activity of a
transporter-like protein other than the UDP-glucose transporter. Plant
Table S10 Reaction set for synthesis of storage organ starch
Physiology 122: 867–877. from sucrose
Yin X, van Oijen M, Schapendonk AHCM. 2004. Extension of a
biochemical model for the generalized stoichiometry of electron Table S11 Reaction set for synthesis of UDP-glucose from
transport limited C3 photosynthesis. Plant, Cell & Environment 27: sucrose
1211–1222.
Zerihun A, McKenzie BA, Morton JD. 1998. Photosynthate costs
associated with the utilization of different nitrogen-forms: influence on Table S12 Reaction set for synthesis of UDP-glucuronate
the carbon balance of plants and shoot–root biomass partitioning. New from sucrose
Phytologist 138: 1–11.
Zhu X-G, Long SP, Ort DR. 2008. What is the maximum efficiency with Table S13 Reaction set for synthesis of UDP-xylose from
which photosynthesis can convert solar energy into biomass? Current
Opinion in Biotechnology 19: 153–159.
sucrose

New Phytologist (2010) 188: 939–959  The Author (2010)


www.newphytologist.com Journal compilation  New Phytologist Trust (2010)
New
Phytologist Tansley review Review 959

Table S14 Reaction set for synthesis of UDP-arabinose Table S32 Reaction set for synthesis of proline from sucrose
from sucrose and NH3

Table S15 Reaction set for synthesis of UDP-galactose Table S33 Reaction set for synthesis of phenylalanine from
from sucrose sucrose and NH3

Table S16 Reaction set for synthesis of GDP-mannose Table S34 Reaction set for synthesis of threonine from
from sucrose sucrose and NH3

Table S17 Reaction set for synthesis of GDP-fucose from Table S35 Reaction set for synthesis of isoleucine from
sucrose sucrose and NH3

Table S18 Reaction set for synthesis of UDP-rhamnose Table S36 Reaction set for synthesis of tyrosine from
from sucrose sucrose and NH3

Table S19 Generalized reaction set for polymerization of Table S37 Reaction set for synthesis of lysine from sucrose
NDP-sugars into hemicelluloses and regeneration of NDP and NH3

Table S20 Generalized reaction set for polymerization of Table S38 Reaction set for synthesis of histidine from
NDP-sugars into hemicelluloses, regeneration of NDP and sucrose and NH3
methylation of sugar residue
Table S39 Reaction set for synthesis of valine from sucrose
Table S21 Reaction set for synthesis of 2-oxoglutarate from and NH3
sucrose
Table S40 Reaction set for synthesis of leucine from sucrose
Table S22 Reaction set for synthesis of ribose 5-P from and NH3
sucrose
Table S41 Reaction set for synthesis of methionine from
Table S23 Reaction set for synthesis of glutamate from sucrose, NH3 and SO4
sucrose and NH3
Table S42 Reaction set for synthesis of tryptophan from
Table S24 Reaction set for synthesis of glutamine from sucrose and NH3
sucrose and NH3
Table S43 Reaction set for synthesis of oxaloacetic acid
Table S25 Reaction set for synthesis of alanine from sucrose (OAA) from sucrose
and NH3
Table S44 Reaction set for synthesis of malic acid from
Table S26 Reaction set for synthesis of arginine from sucrose
sucrose and NH3
Table S45 Reaction set for synthesis of citric acid from
Table S27 Reaction set for synthesis of aspartic acid from sucrose
sucrose and NH3
Table S46 Reaction set for synthesis of aconitic acid from
Table S28 Reaction set for synthesis of asparagine from sucrose
sucrose and NH3
Table S47 Quantum requirement and nitrate photoassimi-
Table S29 Reaction set for synthesis of serine from sucrose lation
and NH3
Please note: Wiley-Blackwell are not responsible for the
Table S30 Reaction set for synthesis of cysteine from content or functionality of any supporting information
sucrose, NH3 and SO4 supplied by the authors. Any queries (other than missing
material) should be directed to the New Phytologist Central
Table S31 Reaction set for synthesis of glycine from sucrose Office.
and NH3

 The Author (2010) New Phytologist (2010) 188: 939–959


Journal compilation  New Phytologist Trust (2010) www.newphytologist.com

You might also like