Professional Documents
Culture Documents
DEPARTMENT OF MICROBIOLOGY
FACULTY OF LIFE SCIENCE
FEDERAL UNIVERSITY DUTSIN-MA, KATSINA STATE
IN PARTIAL FULFILLMENT OF THE REQUIREMENT FOR THE AWARD OF B.SC.
MICROBIOLOGY
SEPTEMBER, 2023
i
DECLARATION
I Abdullahi Abdulsalam, declare that this technical report was written by me. It comprises of the summary of
of all the work done during my period of attachment at Nigerian Institute for Trypanosomiasis Research
(NITR), Kaduna. I therefore submit the report work in partial fulfilment of the requirement for student
ii
CERTIFICATION
I ABDULLAHI ABDULSALAM, do solemnly certify that this student industrial work experience scheme
(SIWES) technical report was done by me based on the experience I acquired during my 6(six)months of
attachment at Nigerian Institute for Trypanosomiasis Research (NITR) located at no. 1 surname road u/rimi
ABDULLAHI ABDULSALAM
(Student) Signature/Date
iii
ACKNOWLEDGEMENT
My profound gratitude to almighty God for sustaining me throughout the period of this
program (SIWES) and also to my institutional-based supervisor for his tireless effort in
Danjuma Nabara and Hajiya Yahanasu Abdullahi my siblings for their prayers, love and
I appreciate the following Staffs for their contributions towards the success of my training;
Madam Sarah Obaje, Madam Gladys and Mr. Usman Mustapha Sambo (Head of CSU
lab/industry-based supervisor), Mallam Tahiru, Mr. Suleiman Aliyu, Miss. Lami Ali, Miss.
Nafisat, Mr. Salau’ddeen Umar, Mr. Nehemiah Adagadzu. Mr. Nafiu, Mr. Ahmed and Mrs.
Ibrahim. Thank you all for your support, encouragement, words of advice and supervision.
iv
TABLE OF CONTENTS
Contents Pages
Title Page - - - - - - - - - I
Declaration - - - - - - - - - II
Dedication - - - - - - - - III
Acknowledgement - - - - - - - - IV
Summary - - - - - - - - V
Table of Contents - - - - - - - - VI
CHAPTER ONE
INTRODUCTION
CHAPTER TWO
THE ORGANIZATION
2.2 Brief History of Nigerian Institute for Trypanosomasis Research (NITR), Kaduna
- - - 6
CHAPTER THREE
SIWES ACTIVITIES
3.3 Reception - - - - - - - 11
v
3.4 Bacteriology Unit - - - - - - - 12
CHAPTER FOUR
4.0 Conclusion - - - - - - - - 19
4.1 Recommendations - - - - - - - 20
References - - - - - - - - 20
vi
CHAPTER ONE
INTRODUCTION
The government’s decree No.47 of 8th Oct. 1971 as amended in 1990 highlighted the
training and retraining of workers in order to effectively provide the much needed high
quality goods and services in a dynamic economy. The decree led to the establishment of
Industrial Training Fund (ITF) in 1973/1974. The growing concern among our industrialists
that graduates of our institutions of higher learning lack adequate practical background
studies preparatory for employment in industries, led to the formation of Students Industrial
ITF has as one of its key functions; to work as a cooperative entity with industry and
commerce where students in institutions of higher learning can undertake mid-career work
experience attachment in industries which are compatible with students’ area of study
(Okorie, 2000).
SIWES is a skill training programme which forms part of the approved minimum academic
standard in various programs across all higher institutes. It is an effort to bridge the gap
between theory and practical. Practical knowledge involves developing skills through the
use of tools or equipment to perform tasks that are related to the fields of study. No society
can achieve meaningful progress without encouraging its youths to acquire necessary
practical skills. Such skills enable them to harness available resources to meet the needs of
society. The Students Industrial Work Experience Scheme (SIWES) is a planned and
supervised training intervention based on stated and specific learning and career objectives
Environmental science, Medical sciences and Pure and Applied sciences for the industrial
situation which they are likely to meet after graduation. The duration of SIWES is six
1
months for Universities at the end of 300 or 400 or 500 levels depending on the discipline
(information and guidelines for SIWES, 2002). The work experience program gives students
The Scheme is aimed at exposing students to real work environment which helps them to
careers.
These include;
i. Provide avenue for students in institution of higher learning to acquire industrial skills
and experience
ii. Prepare students for the industrial works situation they are likely to meet after
graduation.
iii. Exposing students to work methods and techniques in handling equipment and
iv. Making transition from school to the world of work easier and enhance student’s
vi. Enlisting and strengthening employer’s involvement in the entire educational process
2
1.2 History of SIWES Programme
assist student’s gain relevant training on the job experience in their various disciplines,
which is in line with the Federal Government’s Policy on the development of a self-reliant
and practical oriented education for her citizens. SIWES was established in 1973, under the
military administration of Gen. Yakubu Gowon, former Head of States of the Federal
Republic of Nigeria. This programme is supported and sponsored by the Industrial Training
Fund (ITF), with the approval of the Federal Government. SIWES is a vital feature of
almost all professional and technical training programmes all over the world. This
programme was designed to expose students to practical work experience during the
attachment. Students are assigned specific duties which are to be supervised by the industry-
based supervisor.
The programme was introduced to reduce the nation’s dependence on foreign, imported
skills and technology; this has led to virile and independent economy and also increased
The scheme started in 1974 with 748 students from 11 institutions of higher learning
participating. By 1978, the scope of participation in the scheme increased to about 5,000
students from 32 institutions. The Industrial Training Fund withdrew from the management
of the scheme in 1979 owing to problems of organizational logistics and the increased
financial burden associated with the rapid expansion of SIWES (ITF, 2003). Consequently,
the Federal Government funded the scheme through the National Board for Technical
Education (NBTE) who managed SIWES for five years (1979-1984). The supervising
agencies (NUC & NBTE) operated the scheme in conjunction with their respective
The scheme was subsequently reviewed by the Federal Government resulting in Decree
No.16 August, 1985 which required that all students enrolled in specialized engineering,
technical, business, applied sciences and applied arts should have supervised industrial
attachment as part of their studies. In view of the above, the ITF was directed by the Federal
3
Government to once again take charge and resume responsibility for the management of
Commission (NUC), the National Board for Technical Education (NBTE) and the National
The scheme has witnessed rapid expansion since the resumption of its management by ITF
in 1984.
FEDERAL GOVERNMENT
Federal Ministry of
Commerce and Industry
Tertiary Institutions
Employers, ITF Area Offices
Industry, (Universities, Polytechnics,
Government (SIWES Units)
Colleges of Education)
4
1.3 Location of ITF Office
The Industrial Training Fund (ITF) Headquarters is located along Miango Road Jos, Plateau
The Industrial Training Fund has its core mandate of training to improve the performance of
industrial work force in the economy by training for skill acquisition and improvement of
work processes.
These include;
i. Expose students to the environment in which they will eventually work, thereby enabling
ii. Gives opportunity for students to blend theoretical knowledge acquired to perform work
iii. Provision of an enabling environment where students can develop and enhance personal
iv. Prepares students for employment and making the transition from school to world of
vi. Preparing students to contribute to the productivity of their employers and national
vii. Enabling students appreciate work methods and gain experience in handling equipment
5
6
CHAPTER TWO
THE ORGANIZATION
The organization where the training was carried out is Nigerian Institute for
Kaduna.
2.2 Brief History of Nigerian Institute for Trypanosomasis Research (NITR), Kaduna.
The Nigerian Institute for Trypanosomiasis Research (NITR) was established in the year
1947 first as West African Institute for Trypanosomiasis Research (WAITR) by Act No. 36
of the 1951 British Parliament with its headquarters located in Kaduna as an inter-territorial
organization that served the interests of the British West African Colonies of Ghana (then
Gold Coast), Gambia, Sierra Leone and Nigeria. However, with independence in 1960 the
other West African countries withdrew from the inter-territorial organization leaving
Nigeria alone. From 1964, the federal government took the entire responsibility of the
institution through act No 33 of the 1964 Nigerian parliament as the name was changed to
Nigeria Institute for Trypanosomiasis (NITR) received mandate to conducts research and
(sleeping sickness), hence, it was renamed Nigerian Institute for Trypanosomiasis and
Onchocerciasis Research (NITR). Both diseases have remained obstacles to improve public
health, poverty alleviation and agricultural developments. Nigeria Institute for Trypanosomiasis
7
ii. To promote food security and rural development.
i. To suppress or eliminate tsetse flies and black flies from the affected communities.
ii. To develop, strengthen and sustain national capabilities and their respective vectors.
iii. To bring better and improved tools and technologies to bear on the problems
Directorate: It is the brain where all the activities of the institute are coordinated and it is
Under the office of the Directorate/CEO there are units, which consist of Legal, Consultancy
Services, Internal Audit, Public Relation, Procurement and Servicom. There are also eight
8
9
CHAPTER THREE
SIWES ACTIVITIES
1. Proper procedures and safety precautions should be followed when experiments are
performed.
2. Users are required to observe the necessary legislative ordinances when life specimens are
3. Be alert to unsafe conditions and actions, and bring them to the attention of your
supervisor or the Departmental Health and Safety Officer so that remedial action can be
Departmental Health and Safety Officers and the Administrative Support & Estates
Management Office. Sufficient professional advice and support should be obtained from
these channels. Caring about the health and safety of your fellow workers will be
4. No food and beverages or use of make-up are allowed in the laboratory. Smoking is
strictly prohibited. Glassware or containers that had been used for laboratory operations
should never be used for preparing or keeping food or drinks. Food storage is not
5. Follow disposal procedures for chemical wastes. Experimental apparatus may require
traps or scrubbing devices to prevent the escape of toxic substances into the laboratory and
the environment.
6. Make sure that all containers of hazardous substances (chemicals, biological agents or
10
3.3 LABORATORY EQUIPMENTS AND THEIR USES
Microscope: Is a magnifying object, used to view the content of a sample that is not visible with
Centrifuge: Is used for spinning specimen e.g. urine to enable separation into constituents or
Refrigerator: Provides suitable temperature for storage and preservation of reagents, unused
Bunsen burner: Serves as the source of heat for sterilizing wire loop, surgical forceps and other
Wire loop: It is used for streaking specimen on culture plates and it can also be used for making
Lancet: It is a sterile needle used to prick the thumb for the collection of blood samples.
Capillary tube: It is used for the collection of blood samples to determine the packed cell volume.
Universal bottle: used for sample collection e.g. urine, stool, semen
Glass slide: It is used for the preparation of samples to be viewed directly under the microscope.
Sterile swab sticks: Is used for the collection of samples to directly from the sight of infection e.g.
Sampling bottles: They are bottles used for the collection of blood samples e.g. universal bottle,
fluoride oxalate bottle, Ethylene-Di-Amine-Tetra Acetic Acid bottle (EDTA), Lithium Heparin
Micro hematocrit centrifuge machine: it is used to spin sample for the analysis of packed cell
Micro hematocrit reader: used to read the packed cell volume in percentage.
11
Tourniquet: it is tightened on patient hand in the collection of blood sample in order to get a
Accu chek: used to check for the sugar level in the body with the aid of its strip.
Hematology analyzer: Is used for the analysis of Full Blood Count (FBC).
Consultancy and extension service division (C.E.S.D) is one of the divisions under science
research departments in Nigerian Institute for Trypanosomiasis Research (NITR). This division
is responsible for providing wide range of services to the general public with the aims of
generating revenue and fulfilling the corporate social contributions to the host communities.
These divisions also have sub-units. The sub-units under C.E.S.D are:
The main role of this unit is targeted at providing basic routine medical laboratory screening
and diagnosis of several diseases. This unit is divided into various sections depending on the
a) Reception
b) Microbiology Unit
c) Serology Unit
12
e) Parasitology Unit
f) Hematology Unit
3.3 Reception
In this section the following activities were carried out; collection of samples, registration of
samples in the daily register books, and copying of results from the daily register books.
Samples collection is the duty of the receptionist. There are several samples collected from
the patients at reception unit in CSU laboratory. These includes urine samples, stool
samples, semen samples, sputum samples, swab samples, blood samples etc.
One or two drops of blood were wiped using a dry cotton wool.
After collecting enough blood for the test, the surface was wiped up with dry cotton wool.
Venous blood is useful when large volume of blood is required. Venous blood is used for
carrying out several tests under hematology, serology, chemical pathology etc. The
blood is obtained via venous puncture using a sterile plastic syringe and needle.
Materials:
Syringe and needle, 70% alcohol, cotton wool, tourniquet, hand gloves, sample container
Method
1. A tourniquet was tied to the upper arm sufficiently tight to restrict the venous flow and
make the veins stand out. The patient was also asked to keep the arm straight with the
fist clenched.
13
2. The distended veins were felt and the most suitable vein was selected and swabbed with
70% alcohol and allowed to dry. Then the syringe and sample container were prepared.
3. The left thumb was used to press just below the puncture site to anchor the vein.
4. The needle was inserted smoothly with the bevel facing upwards at an angle of 30 0 to
the surface of the arm, and in a direct line with the vein and blood was withdrawn into
the syringe when the needle had entered the vein and tourniquet released.
5. When sufficient quantity of blood was collected, the tourniquet was loosened and a pad
of cotton wool was placed at the site of puncture and the needle withdrawn gently.
8. The needle was detached and discarded in appropriate disposal container, while the
Sputum/Semen Collection.
protozoa and helminthes. It is also useful for the quantification of fecal leukocytes.
Materials: normal saline, glass slide, coverslip, applicator stick, stool sample, microscope
Method
2. With an applicator stick, a small portion of the stool was picked up from an
appropriate site and mixed with the saline on the slide to form a uniform suspension.
3. The suspension was covered with a coverslip by holding it at an angle and lowering
4. The wet mount was focused using a low power 10x objective.
5. The amount of light was regulated with the sub stage condenser, the diaphragm and
The entire field was examined in a systematic order by focusing the objective on the top left
hand corner and moving the slide slowly up and down or backward and forward, when any
parasite or suspicious material was observed, the higher objective (40x) was used. Each
microscope field was examined carefully, focusing up and down before moving to the next
field. Ova and motile forms of parasites were looked for e.g. Strongyloides stercoralis,
mansoni etc.
15
Culture medium, also called growth medium, is a special medium used in
culture medium is composed of different nutrients that are essential for microbial growth.
Some of the culture media routinely used in NITR CSU laboratory includes; Nutrient
agar, Salmonella Shigella Agar (SSA), blood agar, chocolate agar, meat extract etc.
Nutrient agar is a general purpose medium supporting the growth of a wide range of non-
fastidious organisms. Nutrient agar is popular because it can grow a variety of bacteria
and fungi, and contains many nutrients needed for bacterial growth.
Procedure
1. 28.0g of nutrient agar (N.A) powder and 1000mls of distilled water were weighed
3. The mixture was heated gently to make sure the powder dissolved completely.
4. The medium was then sterilized by autoclaving at 15Psi (i.e. 121°c for 15 minutes)
Blood agar is an enriched, bacterial growth medium that encourages the growth of
fastidious organisms such as Streptococci. Blood agar has two major uses:
Procedure
1. 28.0g of nutrient agar (N.A) powder and 1000mls of distilled water were weighed and
measured respectively.
3. The mixture was heated gently to make sure the powder dissolved completely.
16
4. The medium was then sterilized by autoclaving at 15Psi (i.e. 121°c for 15 minutes).
5. After sterilization, it was allowed to cool. About 2mls of fresh blood was then added
6. The agar was dispensed aseptically into petri dishes and allowed to set.
Salmonella Shigella agar (SSA) is a selective and differential medium used for the isolation,
cultivation and differentiation of gram negative enteric microorganisms isolated from both
Procedure
1. 63.0g of SSA powder and 1000ml of distilled water were weighed and measured.
2. The SSA powder was dissolved into the distilled water, boiled with frequent agitation
3. It was then allowed to cool to about 50°c, and aseptically dispensed into petri dishes
This unit is responsible for carrying out tests that involves serum. In practice, serology usually
refers to the diagnostic identification of antibodies in the serum. The purpose of such tests
detects serum antibodies or antibody-like substances that appear specifically in association with
certain diseases or to one’s own proteins (in instances of autoimmune diseases). There are
several serological techniques that can be used depending on the antibodies being studied. These
techniques includes; agglutination, precipitation and complement fixation. Tests carried out in
this subunit of the CSU laboratory NITR include; hepatitis B surface antigen (HBSag) test,
hepatitis C virus (HCV) test, pregnancy test (PT), human immune virus (HIV) test, Veneral
17
3.5.1 Widal Test
Widal test is a test of blood that uses an agglutination reaction to make a presumptive
diagnosis of typhoid fever and other salmonella infections. The enteric fever is a life
threatening illness caused by infection with the bacteria, Salmonella typhi, usually
transmitted through food and drinks contaminated with fecal matter. It is associated
constipation, weight loss, high fever and rash known as rose spots. Early diagnosis
and treatment are important because serious complications including severe bleeding
Reagents:
1. Antigen suspensions
Materials: syringe and needle, tourniquet, alcohol swab, agglutination tile, applicator sticks,
18
Method
1. Blood sample was collected from the patient and dispensed into an EDTA bottle.
2. Plasma was obtained by centrifuging the blood sample at 4000 rpm for 5 minutes.
3. Using a sample pipette, a drop of plasma was added to each circle on the agglutination
4. The widal antigen suspensions were brought to room temperature and then shaken
vigorously.
5. One drop of appropriate widal antigen suspension was added to the corresponding
6. The contents were mixed uniformly over the entire circle with separate applicator
sticks.
7. The tile was rocked gently back and forth and agglutinations were observed
macroscopically after 3 minutes. The results were recorded as either 1/20, 1/40, 1/80,
Interpretation of results
The result is interpreted from the observation of agglutination reaction based on the
Result obtained from Widal test. Other test include; Hepatitis C Virus (HCV) Test,
Other testes include: Hepatitis B Surface Antigen (HBsAg) Test, Retroviral Screening Test.
19
3.6 Chemical Pathology Unit
investigation of bodily fluids such as blood, urine and cerebrospinal fluid. By discovering
how and where the body’s chemistry has changed, diseases can be diagnosed and
monitored. This section deals with biochemical and physiological related test of most blood
sample including test such as urinalysis test and blood sugar test.
1. Fasting Blood Sugar (FBS): This is done when the blood sample is collected after a
period of no food intake. The fasting period for adult is usually 8 – 12 hours while for
2. Random Blood Sugar (RBS): This is done when the blood sample is collected at any
3. 2 Hours Post Prandial (2hpp) Sugar: This is done when the blood sample is collected
exactly 2 hours after a carbohydrate meal has been taken (i.e. 2 hours post prandial).
Note: All the above tests follow the same procedure, only time of sample/specimen
20
CHAPTER FOUR
4.0 Conclusion
The need for capacity building of human resources in industry, commerce and government
institutions through training and retaining of manpower in order to effectively provide the
much needed high quality goods and services in a dynamic economy as ours and the
growing concern among our industrialists that graduates of our institutions of higher
meaningful progress without encouraging its youths to acquire necessary practical skills that
will enable them make use of available resources to meet the needs of society. Hence,
SIWES is a well thought out program that government, individuals, corporate bodies and
4.0.1 Recommendations
Owing to lapses observed during the six (6) months period of Students’ Industrial Work
1. Regular supervisory visits to the students on industrial training should be carried out by
both the staff of training institutions and ITF to motivate the students.
4. The various levels of government (Local, State and Federal Government), private
individuals, non-governmental organizations and the banking sector should establish and
to students.
21
REFERENCES
22
Andrews, S.S. & Karlen, D.L. & Mitchell, J. (2002). A Comparison of Soil Quality
Indexing Methods for Vegetable Production Systems in Northern California.
Agriculture Ecosystems and Environment. 90; 25-45. 10.1016/S0167-
8809(01)00174-8.
Brown, B.A. (1993). Hematology: Principles and Procedures, Sixth Edition, Lea and
Febiger, Philadelphia, pp. 107-111.
Cheesbrough, M. (2003). District Laboratory Practice in Tropical Countries (2nd Edition).
London English Language Book Society. pp. 100-194.
Deborah, W. (2017). Gastrointestinal Issues and Complications. Pain Management
Grant G.H., Silverman L.M., Christenson R.H. (1987). 3th Ed. WB Saunders Company;
Philadelphia:. Amino acids and proteins. (Fundamental of Clinical Chemistry).
Henry, G. H., Dreher, B., & Bishop, P. O. (1974). Orientation specificity of cells in cat
striate cortex. Journal of Neurophysiology, 37, 1394–1409.
ITF (2002). Information and Guideline for Students Industrial Work Experience Scheme.
Jos, Plateau: ITF Publishers.
ITF (2003). Information and Guideline for Students Industrial Work Experience Scheme.
Jos, Plateau: ITF Publishers.
Johansson, C., & Lansner, A. (2007). Towards cortex sized artificial neural systems. Neural
Networks, 20, 48–61.
Judith, M. (2016). Orientation specificity of cells in cat striate cortex. Journal of
Neurophysiology, 37, 1394–1409.
Lorke, D. (1983). A new approach to practical acute toxicity testing. Arch Toxicol.;54:275–
87.
Okorie, J.U. (2000). Developing Nigeria’s Work Force. Calabar. Page Environs Publishers.
Willey, L. 2009. Gigawatt wind power: Support U.S. 20% wind generation by 2030, in
2003. MIT Conference on Systems Thinking for Contemporary Challenges.
Cambridge, UK., p. 10
23