Professional Documents
Culture Documents
METAGENOMICS
18
Inauguration
Program overview
19
Pre-requisites
Introduction Linux basics and conda
Introduction to basics in environment setup
metagenomics Introduction to Jupyter notebook & functions
20
QIIME2 Overview
22
QIIME2 Initial steps
QIIME2 Introduction and Key Importing Sequences
Terminology Overview Demultiplexing
QIIME2 setup & installations and De-noising and
Dataset and file downloads clustering
25
Phylogeny analysis
26
Taxonomic analysis
Taxonomic
Phylogenetic tree construction
Core metric estimation Breakdown
Associated data analysis Identifying OTU’s
27
Mini-project
Introducing project Planning &
28
Project discusion
clarifying doubts &
deadlines questions
Group distribution Tips for final report
29
Project discusion
30
Project Assesment
clarifying doubts & Evaluating the reports
questions e-Quiz assessment final
Tips for final report certification