Professional Documents
Culture Documents
Protectinggroups
Protectinggroups
Krishna P. Kaliappan
Department of Chemistry
Indian Institute of Technology-Bombay
Mumbai 400 076 INDIA
http://www.chem.iitb.ac.in/~kpk
kpk@chem.iitb.ac.in
When a molecule has more than one functional group, then there is a
likely possibility that functional groups interfering with each other
while carrying out a reaction.
O O
CO2Et CH2OH
O O
O O
CO2Et CH2OH
2. One for the introduction of the protecting group and the other for
removing it.
When more than one functional group of similar type, with very little
difference in terms of reactivity, present in the molecule, selective
protection of one can be achieved in the presence of other by taking
advantage of steric effects, stereoelectronic effects etc.,
Hydroxy
Functional
Groups
Carbonyl Amines
Primary
Phenols Secondary
Hydroxyl
DIols Tertiary
Carboxylic acids
Carbonyl
Aldehydes Ketones
Aliphatic Primary
Amines
12
PG for Alcohols
Introduction of protecting groups
R O H + X PG R O PG + HX
R O PG + HY R O H + Y PG
Alkyl Ethers
Esters
Alkyl
ethers
Methyl Ether
Alkyl
Ethers
BOM Ether
Benzyl Ether
Benzyl
Ethers
Tr Ether
TMS Ether
Silyl
Ethers
IPDMS Ether
Acetate
Esters
Trifluoroacetate Dichloroacetate
Trichloroacetate
Troc Boc
Esters
Alloc CBz
Fmoc
Acetonide
1,2-Diols
Di-t-Butylsilylene Benzylidene
p-Methoxybenzylidene
OR
Ag2O, MeI NaH, CH3OCH2Cl, THF
OR OR
OR OR
OR
TMSCl/NaI
, PPTS, DCM
O O , PTSA, DCM
OR OR
OR OR
NH NH
OR OR
MeO
PMP
OH OPMB DDQ O O
R DCM, MS
R
CAN DIBAL-H
OR
DDQ
PMBO OH
OH OH
R
R
Cl
NaH, , THF
Ph3CCl, Et3N, THF
R3
CH-401 Course on Organic Synthesis; Course Instructor: Krishna P. Kaliappan 27
Nitrobenzyl ethers
o-Nitrobenzyl ethers p-Nitrobenzyl ethers
Cl Cl
NaH, , THF NaH, , THF
NO2 O2N
RO-oNb Alcohols RO-pNb
R1 O O
R2
Si R
O R3 O R O O O OR
NaOH, Me2SO4
OH OR OMe
K2CO3, MeI
OR
CH2N2
Deprotection
BBr3, DCM
OMe OR OH
EtSNa, DMF
OR
TMSI
OR
HCl, MeOH
Cleavage: Zn dust
Thiourea
O
R OH R
O
40
1,2-Diols
R2 R3
OH Aldehyde or O O
R1
R Ketone, H+
OH R R1
Isopropylidenes (acetonides)
HO OH Acid O O
R1 R2 Acetone or
R1 R2
OMe OMe
or
OMe
n
HO OH Acid O O
R1 R2
or R1 R2
O O
R1 R2 CH(OMe)2 CHO
R1 R2
or
Ph
OH
PhCHO O
O
CH2OH ZnCl2
PhCHO
OH
CH2OH ZnCl2 O Ph
O
OH
Acetone TrO
TrO
O
PPTS, CuSO4 O OH
OH OH
R1 R2 CH(OMe)2 CHO
R1 R2
or
OMe OMe
O Br
O NBS
Ph O Ph O
O OMe O OMe
HO CH3CN HO
OH OH
PMP
OH OPMB DDQ PMBO OH
O O DIBAL-H
R DCM, MS R
R
48
PG’s for Aldehydes/Ketones
O O O O O O O O
R1 R2 R1 R2 R1 R2 R1 R2
S S S S O S
S S
R1 R2 R1 R2 R1 R2
R1 R2
S,S-Dimethyl 1,3-Dithiolane 1,3-Dithiane 1,3-Oxathiolane
thioacetal
Order of Reactivity
Aldehydes > acyclic ketones = cyclohexanones > cyclopentanones >
α,β-unsaturated ketones = α,α-substituted ketones > aromatic ketones
CH-401 Course on Organic Synthesis; Course Instructor: Krishna P. Kaliappan 49
Dimethyl acetals/ketals
O
O O
R1 R2 R1 R2
Formation Cleavage
MeO OMe
3. , PTSA
MeO OMe
OH OH , DME O OH
HO O
OH O
SnCl2
OH OH OH O
TiCl4 OMe
O O O
MeOH, Et3N OMe
O
O O O O O O
R1 R2 R1 R2 R1 R2 R1 R2
Formation Cleavage
n
HO OH , Toluene, PTSA 1. Acetone, PPTS, H2O, Heat
n 2. 1M HCl, THF
TMSO OTMS , TMSOTf, DCM
3. Me2BBr, DCM, -78 oC
-78 oC
O O
O
HO OH
O PTSA, Toluene O
HO OH
O
O PTSA, Toluene
O
O H O O HO
O
HO OH
PTSA, Toluene
CH3 CH3
S S
TFA S
MeO S O
O
OHC
MeO O O
Ra-Ni, H2
HgCl2, CaCO3 S
EtOH
O Acetone S
O O SH SH S S
BF3.Et2O
O O
LiBF4
O O O
O
O
Me3Si
HO SO2Ph SO2Ph
O OH O
DBU, DCM
O O
R1 R2 pTSA R1 R2
R1 R2
O O R O O NO2
R
Bn Si
R O R O R R O CCl3 R O
Benzyl Ester Silyl Ester Halo Ester o-Nitrobenzyl Ester
OR TMS
OR O O O N
R OR TMS R O
R O R O
Orthoester TMS ethyl
Ester SEM Ester 1,3-Oxzoline
BnOH OBn
OH
DCC O
O
Mitsunobu Reaction
DEAD, Et2O O
O
H2SO4, Cat O
CO2H
OR O
1, MsCl, Py
2. tBuOH, Et3N
CH-401 Course on Organic Synthesis; Course Instructor: Krishna P. Kaliappan 61
Aryl Esters
Due to steric hindrance, BHT and BHA do not react with
organometallic reagents
MeO OH MeO OH
BHT BHA
O O nBuLi nBu O
BHT, nBuLi
OH iPr3SiCl OSiiPr3
O Im, THF O
OH H2N OH O
O Toluene, N
Heat
Protection R1
R NH2 R NH + R N + Quarternary
through R1 R1
alkylation
O SiMe3 O
O
R R
N O CCl3 R N O
H N O H
Trichloroethyl H
Trimethylsilylethyl Allyl carbamate
carbamate (Troc) (Alloc)
carbamate (Teoc)
O Ph
R O
N O
H R
Benzylcarbamate N O
H
(CBz) 9-Fluroenylmethyl
carbamate (Fmoc)
CH-401 Course on Organic Synthesis; Course Instructor: Krishna P. Kaliappan 66
Amides
O
R
N R1
H
Amides
O
R
R1COCl, Py N R1
R NH2 H
Amides
H+, H2O
O O
R
Cl OR1 N OR1
R NH2 H
Carbamates
K2CO3, MeOH
O
O N
Cl O H
R NH2 R R NH2
N O
Base H
Formation: CH2=CHCH2OCOCl, py
(CH2=CHCH2OCO)2O, DCM
KF, CH3CN
TAST, CH3CN
O
NH2
HN O
Pd(OAc)2
CO2Me
CO2Me
Et3N, Et3SiH