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Biochemistry Sem 1
Biochemistry Sem 1
Atomic bonds are the forces that hold atoms together to form molecules or compounds. There are
three primary types of atomic bonds:
1. **Ionic Bonds:** Ionic bonds form between atoms when one atom transfers electrons to
another, resulting in the formation of positively charged ions (cations) and negatively charged
ions (anions). These oppositely charged ions are attracted to each other, forming a strong
electrostatic bond. Ionic bonds typically occur between metal and nonmetal atoms.
2. **Covalent Bonds:** Covalent bonds form when atoms share one or more pairs of electrons.
These bonds are strong and result in the formation of molecules with distinct shapes and
structures. Covalent bonds can be polar, where electrons are unequally shared, or nonpolar,
where electrons are shared equally. Covalent bonds commonly occur between nonmetal atoms.
3. **Metallic Bonds:** Metallic bonds occur between metal atoms within a metallic structure. In
metallic bonding, outer electrons are delocalized, meaning they are free to move throughout
the structure. This sharing of electrons results in the formation of a “sea of electrons” that holds
the metal atoms together in a lattice structure. Metallic bonds contribute to the unique
properties of metals, such as conductivity and malleability.
These atomic bonds are essential for the formation of molecules, compounds, and the vast array of
materials found in nature. The type and strength of the bond depend on factors such as the
electronegativity of the atoms involved, their atomic structure, and the conditions under which the
bond forms.
The hydrophobic effect refers to the tendency of nonpolar molecules or groups to aggregate in aqueous
environments, driven by the desire to minimize their contact with water molecules. This phenomenon
arises due to the polar nature of water molecules and the hydrophobic nature of nonpolar molecules or
groups. Here's a breakdown of the hydrophobic effect:
1. **Water's Polarity:** Water molecules are polar, with a partial positive charge on the hydrogen
atoms and a partial negative charge on the oxygen atom. This polarity gives water molecules the ability
to form hydrogen bonds with each other and with other polar molecules.
2. **Hydrophobic Molecules or Groups:** Hydrophobic molecules or groups are those that do not
readily interact with water molecules due to their nonpolar nature. Examples include hydrocarbon
chains, aromatic rings, and many organic solvents. These molecules or groups prefer to interact with
each other rather than with water.
3. **Entropy Increase:** When hydrophobic molecules or groups are introduced into an aqueous
environment, water molecules reorganize around them to minimize their contact with the nonpolar
substance. This reorganization leads to an increase in the entropy of the system, as water molecules
become more disordered.
Understanding the hydrophobic effect is essential for various fields, including biochemistry, molecular
biology, materials science, and drug design, as it governs the behavior of molecules and structures in
aqueous environments.
Molecular interactions refer to the various forces and bonds that occur between molecules, influencing
their behavior, properties, and interactions with other molecules. These interactions can be broadly
categorized into several types:
1. **Covalent Bonds:** Covalent bonds involve the sharing of electron pairs between atoms,
resulting in the formation of stable molecules. These bonds are strong and directional,
determining the shape and structure of molecules.
2. **Ionic Interactions:** Ionic interactions occur between ions of opposite charges, typically
involving the transfer of electrons from one atom to another. The resulting electrostatic
attraction between the positively charged cations and negatively charged anions forms ionic
bonds. Ionic interactions are strong in solids but weaker in solution due to ion hydration.
3. **Hydrogen Bonds:** Hydrogen bonds are a type of dipole-dipole interaction that occurs
between a hydrogen atom bonded to an electronegative atom (such as oxygen or nitrogen) and
another electronegative atom. Hydrogen bonds are weaker than covalent bonds but stronger
than van der Waals interactions, playing important roles in molecular recognition, protein
folding, and DNA base pairing.
4. **Van der Waals Interactions:** Van der Waals interactions include dispersion forces, dipole-
dipole interactions, and dipole-induced dipole interactions. These weak forces arise from
temporary fluctuations in electron density around atoms and molecules, leading to attractive or
repulsive forces between them. Van der Waals interactions contribute to the cohesion of liquids
and solids, the behavior of gases, and the interactions between molecules in biological systems.
5. **Hydrophobic Interactions:** Hydrophobic interactions occur between nonpolar molecules in
an aqueous environment. These interactions arise because nonpolar molecules minimize
contact with water molecules, clustering together to reduce their exposure to the polar solvent.
Hydrophobic interactions play a crucial role in protein folding, membrane formation, and the
assembly of biological structures.
6. **Steric Interactions:** Steric interactions involve the repulsion or hindrance between atoms or
groups of atoms due to their spatial arrangement. Steric effects can influence molecular
conformations, reaction rates, and molecular recognition processes.
7. **π-π Interactions:** π-π interactions occur between the π orbitals of aromatic rings, leading to
stacking interactions in molecules containing aromatic systems. These interactions contribute to
the stability of biomolecules such as proteins and nucleic acids and play a role in molecular
assembly and recognition.
Understanding molecular interactions is essential for elucidating the properties and behavior of
molecules in various contexts, including chemical reactions, material science, drug design, and biological
processes.
Van der Waals interactions are weak intermolecular forces that arise due to fluctuations in electron
distribution around atoms or molecules. These interactions can be categorized into three types:
1. **Dispersion Forces (London Dispersion Forces):** Dispersion forces are the weakest type of van der
Waals interaction and occur between all atoms and molecules, regardless of their polarity. They arise
from temporary fluctuations in electron density, creating temporary dipoles. These temporary dipoles
induce similar dipoles in neighboring atoms or molecules, leading to an attractive force between them.
Dispersion forces increase with increasing molecular size or surface area.
2. **Dipole-Dipole Interactions:** Dipole-dipole interactions occur between polar molecules that have
permanent dipoles due to differences in electronegativity between atoms. The positive end of one polar
molecule is attracted to the negative end of another polar molecule, resulting in an attractive force
between them. Dipole-dipole interactions are stronger than dispersion forces but weaker than hydrogen
bonds.
3. **Hydrogen Bonding:** While hydrogen bonding is often considered separately from van der Waals
interactions, it is a type of dipole-dipole interaction that occurs specifically between a hydrogen atom
bonded to a highly electronegative atom (such as oxygen, nitrogen, or fluorine) and an electronegative
atom in a neighboring molecule. Hydrogen bonds are stronger than other types of van der Waals
interactions and play a significant role in the structure and properties of molecules, particularly in
biological systems.
Van der Waals interactions are essential for the stabilization of molecular structures, the cohesion of
liquids and solids, and the interactions between molecules in various chemical and biological processes.
They contribute to phenomena such as surface tension, solubility, and the behavior of gases.
A hydrogen bond Is a type of intermolecular force that occurs when a hydrogen atom, bonded to a
highly electronegative atom such as oxygen, nitrogen, , interacts with another electronegative atom
nearby. Here’s a breakdown of key points regarding hydrogen bonds:
3. Types of Hydrogen Bonds:** There are two main types of hydrogen bonds:
- **Intermolecular Hydrogen Bonds:** These occur between molecules, such as between water
molecules or between complementary base pairs in DNA.
**Intramolecular Hydrogen Bonds:** These occur within a single molecule, such as within a protein or a
DNA strand.
4. **Role in Biological Systems:** Hydrogen bonds play crucial roles in biological systems, contributing
to the structure and function of biomolecules:
- In proteins, hydrogen bonds help stabilize the secondary and tertiary structures, such as alpha helices
and beta sheets.
- In DNA and RNA, hydrogen bonds between complementary base pairs (adenine-thymine, guanine-
cytosine, and adenine-uracil in RNA) hold the two strands together in the double helix structure.
- In water, hydrogen bonds facilitate the unique properties of water, such as its high boiling point,
surface tension, and ability to dissolve many substances.
In summary, hydrogen bonds are important intermolecular forces that contribute to the structure,
stability, and properties of molecules and materials, playing significant roles in both biological and
chemical systems.
Ionic interactions, also known as ionic bonds, occur between atoms or molecules that have opposite
electrical charges. These interactions typically involve the transfer of electrons from one atom to
another, resulting in the formation of positively charged ions (cations) and negatively charged ions
(anions). Here’s a breakdown of key points regarding ionic interactions:
1. **Electron Transfer:** Ionic interactions occur when atoms with significantly different
electronegativities interact. One atom, typically a metal, loses one or more electrons to another
atom, usually a nonmetal, resulting in the formation of ions with opposite charges.
2. **Formation of Ions:** When an atom loses electrons, it becomes a positively charged ion
called a cation. Conversely, when an atom gains electrons, it becomes a negatively charged ion
called an anion. These ions are attracted to each other due to their opposite charges, forming an
ionic bond.
3. **Electrostatic Attraction:** The attraction between the positively charged cations and
negatively charged anions is due to electrostatic forces. These forces are relatively strong and
hold the ions together in a stable arrangement known as an ionic lattice.
4. **Ionic Compounds:** Compounds formed through ionic interactions are called ionic
compounds or salts. These compounds typically have high melting and boiling points and tend to
be crystalline solids at room temperature. Examples include sodium chloride (NaCl), potassium
bromide (KBr), and calcium carbonate (CaCO3).
5. **Solubility and Conductivity:** Ionic compounds are often soluble in water because water
molecules surround and separate the individual ions, disrupting the ionic lattice. When dissolved
in water, ionic compounds dissociate into their constituent ions, enabling them to conduct
electricity.
6. **Non-Directional Interaction:** Ionic interactions are non-directional, meaning they occur
between ions of opposite charges without regard to the orientation of the ions. This leads to the
formation of three-dimensional crystal lattices in ionic solids.
7. **Strength of Ionic Bonds:** Ionic bonds are strong, but not as strong as covalent bonds. They
are characterized by their high lattice energies, which reflect the energy required to separate
the ions in an ionic compound.
In summary, ionic interactions involve the attraction between ions of opposite charges, leading to the
formation of ionic compounds with distinct properties and applications in various fields, including
chemistry, materials science, and biology.
A covalent bond Is a type of chemical bond formed between two atoms when they share one or more
pairs of electrons. This sharing of electrons occurs to achieve a stable electron configuration, typically
resembling that of a noble gas. Here are some key points about covalent bonds:
1. **Electron Sharing:** In a covalent bond, each atom contributes one or more electrons to the
shared electron pair. This sharing allows both atoms to achieve a more stable configuration by
filling their outer electron shells.
2. **Formation of Molecules:** Covalent bonds are responsible for the formation of molecules,
which are groups of atoms held together by one or more covalent bonds. These molecules can
range from simple diatomic molecules, like hydrogen gas (H2) or oxygen gas (O2), to complex
organic molecules found in living organisms.
3. **Types of Covalent Bonds:** Covalent bonds can be classified as polar or nonpolar, depending
on the electronegativity difference between the atoms involved:
- **Nonpolar Covalent Bond:** In a nonpolar covalent bond, the electrons are shared
equally between the atoms, resulting in a symmetrical distribution of charge. This occurs
when the atoms have similar electronegativity’s.
- **Polar Covalent Bond:** In a polar covalent bond, one atom attracts the shared
electrons more strongly than the other, resulting in an uneven distribution of charge.
This occurs when there is a significant electronegativity difference between the atoms.
4. **Multiple Bonds:** Atoms can share more than one pair of electrons to form multiple covalent
bonds. For example, in a double covalent bond, two pairs of electrons are shared between the
atoms, while in
Vitamin as a co enzyme
Vitamins serve essential roles in the body, including acting as coenzymes or precursors to
coenzymes. Coenzymes are small organic molecules that work with enzymes to facilitate
biochemical reactions. They often assist enzymes by carrying chemical groups or electrons during
reactions. Several vitamins serve as coenzymes or precursors to coenzymes, enabling various
metabolic processes to occur efficiently. Here are some examples:
5. **Vitamin B6 (Pyridoxine):** Pyridoxal phosphate (PLP), the active form of vitamin B6, serves as a
coenzyme for over 100 enzymes involved in amino acid metabolism, including transamination,
decarboxylation, and synthesis of neurotransmitters and heme.
8. **Vitamin B12 (Cobalamin):** Vitamin B12 acts as a cofactor for methionine synthase and
methylmalonyl-CoA mutase, enzymes involved in the metabolism of amino acids and fatty acids.
RNA enzymes, also known as ribozymes, are RNA molecules that possess catalytic activity, meaning
they can accelerate chemical reactions without being consumed in the process. Ribozymes were first
discovered in the 1980s, challenging the long-held notion that only proteins could serve as enzymes.
1. **Catalytic RNA:** Ribozymes are capable of catalyzing a wide range of biochemical reactions,
including cleavage of RNA molecules, ligation of RNA molecules, and various other types of RNA
processing reactions.
2. **Structural Diversity:** Ribozymes come in various structural forms, each optimized for
catalyzing specific reactions. Some ribozymes have simple hairpin structures, while others have
more complex tertiary structures that resemble those of protein enzymes.
3. **Biological Functions:** Ribozymes are found in various organisms, where they perform critical
biological functions. For example, ribozymes are involved in RNA splicing, a process essential for
the maturation of mRNA molecules in eukaryotic cells. Ribozymes are also found in viruses,
where they facilitate viral replication and other processes.
4. **Discovery and Importance:** The discovery of ribozymes revolutionized our understanding of
RNA and its role in cellular processes. Prior to their discovery, RNA was primarily viewed as a
passive intermediary between DNA and protein. Ribozymes demonstrated that RNA could not
only store genetic information but also catalyze chemical reactions, blurring the line between
nucleic acids and proteins.
5. **Applications:** Ribozymes have potential applications in biotechnology and medicine. They
can be engineered to catalyze specific reactions in vitro, offering a versatile tool for research and
biotechnological applications. Additionally, ribozymes have been explored as potential
therapeutic agents for treating viral infections and genetic diseases.
Overall, RNA enzymes represent a fascinating class of molecules with diverse structures and
functions. Their discovery has broadened our understanding of RNA biology and opened up new
possibilities for both basic research and practical applications.
The concepts of Km (Michaelis constant) and Vmax (maximum reaction velocity) are fundamental
parameters in enzyme kinetics and are crucial for understanding the behavior of enzyme-catalyzed
reactions. Here’s a breakdown of their significance:
1. Km (Michaelis constant):**
--km is a measure of the affinity between an enzyme and its substrate. It represents the substrate
concentration at which the reaction rate is half of vmax
- A low km value indicates high affinity between the enzyme and substrate, meaning the enzyme
achieves half of its maximum velocity at a low substrate concentration.
- A high km value indicates low affinity between the enzyme and substrate, meaning the enzyme
requires a higher substrate concentration to achieve half of its maximum velocity.
-km is often used to compare the relative affinities of different enzymes for their substrates.
Enzymes with lower are more efficient at low substrate concentrations.
- Inhibition studies can also provide information about enzyme-substrate interactions by affecting
km values.
- Vmax represents the maximum rate of reaction that an enzyme can achieve when saturated with
substrate.
- It is determined by the turnover rate of the enzyme-substrate complex and the concentration of
active enzyme molecules.
Vmaxis influenced by factors such as enzyme concentration, temperature, pH, and the presence of
activators or inhibitors.
- Comparing Vmax values of different enzymes can provide insights into their catalytic efficiencies
and turnover rates.
- Vmax is used in the Lineweaver-Burk plot to determine kinetic parameters such as km and Vmax
In summary, km and Vmax are essential parameters in enzyme kinetics that provide valuable
information about enzyme-substrate interactions, catalytic efficiency, and the behavior of enzyme-
catalyzed reactions. They are widely used in biochemical research, drug discovery, and the study of
metabolic pathways.
Several factors can affect enzyme action, influencing the rate and efficiency of enzyme-catalyzed
reactions. Here are some key factors:
3. **pH:** Enzymes have optimal pH ranges at which they exhibit maximum catalytic activity.
Deviations from this pH optimum can lead to denaturation or altered enzyme-substrate interactions.
pH affects enzyme activity by influencing the ionization state of amino acid residues in the active
site.
5. **Enzyme Inhibitors:** Inhibitors can bind to enzymes and inhibit their activity. Competitive
inhibitors compete with the substrate for binding to the active site, while non-competitive inhibitors
bind to a different site on the enzyme and alter its conformation, reducing its catalytic activity.
6. **Cofactors and Coenzymes:** Many enzymes require cofactors (inorganic ions or small
molecules) or coenzymes (organic molecules, often vitamins) to function properly. These cofactors
and coenzymes can modulate enzyme activity by participating in catalytic reactions or facilitating
substrate binactio
7. **Allosteric Regulation:** Some enzymes are regulated by allosteric effectors, which bind to
regulatory sites on the enzyme and induce conformational changes that alter enzyme activity.
Allosteric regulation can either enhance or inhibit enzyme activity, depending on the nature of the
effector.
Overall, understanding these factors is essential for optimizing enzyme reactions in various
applications, such as biotechnology, medicine, and industrial processes. By controlling these factors,
researchers can modulate enzyme activity to achieve desired outcomes.
Enzyme inhibition
Enzyme inhibition refers to the process by which a molecule binds to an enzyme and reduces or
completely blocks its activity. There are several types of enzyme inhibition, each with distinct
mechanisms and effects on enzyme activity:
1. **Competitive Inhibition:**
- Competitive inhibitors compete with the substrate for binding to the active site of the enzyme.
- These inhibitors typically resemble the structure of the substrate and bind reversibly to the active
site, forming an enzyme-inhibitor complex.
- Examples include drugs and toxins that mimic the structure of natural substrates and interfere
with enzyme function.
2. **Non-competitive Inhibition:**
- Non-competitive inhibitors bind to a site on the enzyme distinct from the active site, called the
allosteric site.
- Binding of the inhibitor induces a conformational change in the enzyme, altering its active site
and reducing its catalytic activity.
- Examples include heavy metals and certain drugs that bind to regulatory sites on enzymes and
inhibit their activity.
3. **Uncompetitive Inhibition:**
4. **Mixed Inhibition:**
- Mixed inhibitors bind to either the free enzyme or the enzyme-substrate complex, leading to
different effects on enzyme activity.
- Mixed inhibition can result in changes to both the \( K_m \) and \( V_{\text{max}} \) of the
enzyme.
- Examples include certain drugs and natural compounds that bind to enzymes and modulate their
activity.
Enzyme inhibition plays a crucial role in various biological processes, including regulation of
metabolic pathways, modulation of enzyme activity in response to environmental changes, and the
development of drugs and therapeutic interventions. Understanding the mechanisms of enzyme
inhibition is essential for drug discovery, enzyme engineering, and the treatment of diseases.
Enzyme action can be regulated in various ways to ensure that biochemical pathways operate
efficiently and respond appropriately to cellular needs. Here are some key mechanisms of enzyme
regulation:
Allosteric enzyme
enzymes typically have multiple subunits and contain regulatory sites, known as allosteric sites, in
addition to their active sites. Binding of specific molecules, called allosteric effectors, to these
allosteric sites can induce conformational changes in the enzyme, altering its activity
allosteric effectors, can either activator (enhance) or Inhibitor (inhibit) enzyme activity
Allosteric Inhibition: Under this process inhibitors bind with protein due to which all active sites of
protein undergo conformational changes due to which activity of enzyme decreases.
Allosteric Activation: Under this process activator binds with protein which increases the function of
active sites leads to increase in enzymatic activity
Homotropic Regulation: In this type of regulation substrate molecules act as an effector also. They
are mainly enzyme activation and known as cooperativity. Example of homotropic regulation is
binding of oxygen to haemoglobin.
Heterotropic Regulation: This is a kind of regulation where substrate and effector are different.
Example of heterotropic regulation is binding of carbon dioxide(co2) to haemoglobin
Eg:Pyruvate kinase,phosphofructokinase
Feedback inhibition is a regulatory mechanism in which the end product of a metabolic pathway
inhibits the activity of an enzyme earlier in the pathway, thereby regulating the rate of the pathway
Feedback inhibition (also known as End-product inhibition) is a type of negative feedback that can
be used to control metabolic pathways.
End-product inhibition occurs when a reaction’s final product blocks an enzyme from a previous
phase in the sequence.
The product interacts with an allosteric site on the enzyme, momentarily inactivating it (via non-
competitive inhibition).
The reaction sequence is paused, and the rate of product synthesis is reduced since the enzyme can
no longer function
ATP, or adenosine triphosphate, is often referred to as the “energy currency” of the cell because it
provides the energy necessary for many cellular processes. Here are some key points about ATP:
Overall, ATP is a crucial molecule in biology, serving as the primary energy currency of the cell and
playing a central role in the transfer and utilization of energy for diverse cellular processes.
Pyrophosphate
Pyrophosphate, often abbreviated as PPi, is a molecule consisting of two phosphate groups (P)
linked by an oxygen atom, forming a diphosphate moiety. Here are some key points about
pyrophosphate:
It is derived from the condensation of two phosphate groups (PO4) through the elimination of a
water molecule. The resulting molecule contains two phosphorus atoms, each with a formal
charge of +5, and five oxygen atoms.
2. **Role in Biochemistry:** Pyrophosphate is involved in various biochemical reactions as a high-
energy intermediate or as a byproduct of phosphate transfer reactions. It is often generated
during the hydrolysis of ATP (adenosine triphosphate), where it serves as a source of free energy
and inorganic phosphate (Pi) for cellular processes.
3. **Energy Transfer:** Pyrophosphate is produced during the hydrolysis of ATP into ADP
(adenosine diphosphate) and Pi by ATPases or ATP synthases. The hydrolysis of pyrophosphate
into two molecules of inorganic phosphate (2Pi) is exergonic and releases free energy, which can
be harnessed to drive endergonic cellular reactions.
4. **Enzyme Inhibition:** Pyrophosphate can act as an inhibitor of enzymes involved in phosphate
transfer reactions by binding to the active site and preventing the binding of substrates or the
release of products. This mechanism of inhibition helps regulate the flux through metabolic
pathways and maintain cellular homeostasis.
5. **Biological Significance:** Pyrophosphate plays a crucial role in various biological processes,
including DNA replication, RNA synthesis, protein synthesis, and metabolism. It serves as a
precursor for the synthesis of other phosphate-containing molecules and participates in the
regulation of enzyme activity and cellular signaling.
6. **Hydrolysis and Stability:** Pyrophosphate is relatively unstable in aqueous solutions and
tends to hydrolyze into two molecules of inorganic phosphate (Pi). This hydrolysis reaction is
catalyzed by enzymes known as pyrophosphatases. The hydrolysis of pyrophosphate is often
coupled to energetically favorable reactions, allowing cells to utilize the released energy for
cellular work.
Carbohydrates
Carbohydrates are the most abundant organic Molecules in nature. They are primarily Composed of
the elements carbon, hydrogen and Oxygen. The name carbohydrate literally means ‘hydrates of
carbon’. Some of the carbohydrates Possess the empirical formula (C.H2O)n where N 3,
Functions of carbohydrates
1. They are the most abundant dietary source Of energy (4 Cal/g) for all organisms.
2. Carbohydrates are precursors for many Organic compounds (fats, amino acids).
3. Carbohydrates (as glycoproteins and glycolipids) participate in the structure of cel Membrane
and cellular functions such as cell Growth, adhesion and fertilization.
4. They are structural components of many Organisms. These include the fiber (cellulose) ofPlants,
exoskeleton of some insects and the cel Wall of microorganisms.
5. Carbohydrates also serve as the storage Form of energy (glycogen) to meet the immediate
Energy demands of the body.
CLASSIFICATION OF CARBOHYDRATES
Carbohydrates are often referred to as Saccharides (Greek: sakcharon–sugar). They Are broadly
classified into three major groups—
This categorization is based on the Number of sugar units. Mono- and oligosaccharides
are sweet to taste, crystalline in Character and soluble in water, hence they are Commonly known as
sugars.
Monosaccharides
Monosaccharides (Greek : mono-one) are the Simplest group of carbohydrates and are often Referred to
as simple sugars. They have the General formula Cn(H2O)n, and they cannot be Further hydrolysed. The
monosaccharides are Divided into different categories, based on the Functional group and the number
of carbon atoms
Aldoses : When the functional group in Monosaccharides is an aldehyde C O H , they Are known as
aldoses e.g. glyceraldehyde,Glucose.
Ketoses : When the functional group is a keto C O group, they are referred to as ketoses e.g.
dihydroxyacetone, fructose. Based on the number of carbon atoms, the Monosaccharides are regarded
as trioses (3C), Tetroses (4C), pentoses (5C), hexoses (6C) and Heptoses (7C). These terms along with
functional Groups are used while naming monosaccharides. For instance, glucose is an aldohexose while
Fructose is a ketohexose (Table 2.1). The common monosaccharides and disaccharides of biological
importance are given in the Table 2.2.
Oligosaccharides
Oligosaccharides (Greek: oligo-few) contain 2-10 monosaccharide molecules which are Liberated on
hydrolysis. Based on the number on Monosaccharide units present, the oligosaccharides are further
subdivided to Disaccharides, trisaccharides etc.
Polysaccharides
Polysaccharides (Greek: poly-many) are polymers of monosaccharide units with high molecular
weight (up to a million). They are usually Tasteless (non-sugars) and form colloids with Water. The
polysaccharides are of two types – Homopolysaccharides and heteropolysaccharides
Homopolysaccharides on hydrolysis yield Only a single type of monosaccharide. They Are named
based on the nature of the Monosaccharide. Thus, glucans are polymers of Glucose whereas
fructosans are polymers of Fructose.
DERIVATIVES OF MONOSACCHARIDES
There are several derivatives of monosaccharides, some of which are physiologically Important
1. Sugar acids : Oxidation of aldehyde or Primary alcohol group in monosaccharide results In sugar
acids. Gluconic acid is produced from Glucose by oxidation of aldehyde (C1 group Whereas
glucuronic acid is formed when primary Alcohol group (C6) is oxidized.
2. Sugar alcohols (polyols) : They are Produced by reduction of aldoses or ketoses. For Instance,
sorbitol is formed from glucose and Mannitol from mannose.
3. Alditols : The monosaccharides, on Reduction, yield polyhydroxy alcohols, known as Alditols.
Ribitol is a constituent of flavin Coenzymes; glycerol and myo-inositol are Components of lipids.
Xylitol is a sweetener used In sugarless gums and candies.
4. Amino sugars : When one or more Hydroxyl groups of the monosaccharides are Replaced by
amino groups, the products Formed are amino sugars e.g. D-glucosamine,D-galactosamine. They
are present as constituents of heteropolysaccharides.N-Acetylneuraminic acid (NAM) is a
Derivative of N-acetylmannose and pyruvic acid. It is an important constituent of glycoproteins
And glycolipids. The term sialic acid is used to Include NANA and its other derivatives. Certain
antibiotics contain amino sugars Which may be involved in the antibiotic activity e.g.
erythromycin.
Lipids (Greek: lipos–fat) are of great Importance to the body as the chief Concentrated storage form of
energy, besides Their role in cellular structure and various other Biochemical functions. As such, lipids
are a Heterogeneous group of compounds and,Therefore, it is difficult to define them precisely.
Lipids may be regarded as organic substances Relatively insoluble in water, soluble in organic Solvents
(alcohol, ether etc.), actually or Potentially related to fatty acids and utilized by The living cells.Unlike the
polysaccharides, proteins and Nucleic acids, lipids are not polymers. Further,Lipids are mostly small
molecules.
Classification of lipids
Lipids are broadly classified (modified from Bloor) into simple, complex, derived and
1. Simple lipids : Esters of fatty acids with Alcohols. These are mainly of two types
(a) Fats and oils (triacylglycerols) : These are Esters of fatty acids with glycerol.
The difference between fat and oil Is only physical. Thus, oil is a Liquid while fat is a solid
at room Temperature.
(b) Waxes : Esters of fatty acids (usually Long chain) with alcohols other than Glycerol.
These alcohols may be aliphatic Or alicyclic. Cetyl alcohol is most Commonly found in
waxes. Waxes are Used in the preparation of candles,Lubricants, cosmotics, ointments,
polishes Etc.
2. Complex (or compound) lipids : These Are esters of fatty acids with alcohols containing
Additional groups such as phosphate,Nitrogenous base, carbohydrate, protein etc.
They are further divided as follows
(a) Phospholipids : They contain phosphoric Acid and frequently a nitrogenous base.This is in
addition to alcohol and fatty Acids.
(i) Glycerophospholipids : These phospholipids contain glycerol as the alcohol
e.g., lecithin, cephalin.
(ii) Sphingophospholipids : Sphingosine is The alcohol in this group of phospholipids e.g.,
sphingomyelin.
(b) Glycolipids : These lipids contain a fatty Acid, carbohydrate and nitrogenous base.The alcohol is
sphingosine, hence they Are also called as glycosphingolipids.Glycerol and phosphate are absent
e.g.,Cerebrosides, gangliosides.Of lipids with proteins.
(c) Lipoproteins : Macromolecular complexes Of lipids with proteins
(d) Other complex lipids : Sulfolipids, aminolipids and lipopolysaccharides are among The other
complex lipids.
3. Derived lipids : These are the derivatives Obtained on the hydrolysis of group 1 and group2 lipids
which possess the characteristics of Lipids. These include glycerol and other alcohols, Fatty
acids, mono- and diacylglycerols, lipid (fat)Soluble vitamins, steroid hormones, hydrocarbons
and ketone bodies.
4. Miscellaneous lipids : These include a Large number of compounds possessing the
Characteristics of lipids e.g., carotenoids,Squalene, hydrocarbons such as pentacosane (in Bees
wax), terpenes etc.
NEUTRAL LIPIDS : The lipids which are Uncharged are referred to as neutral lipids. These mono-, di-, and
triacylglycerols, cholesterol And cholesteryl esters.
Functions of lipids
CHOLESTEROL
Cholesterol, exclusively found in animals, is The most abundant animal sterol. It is widely distributed
in all cells and is a major component Of cell membranes and lipoproteins. Cholesterol(Greek : chole–
bile) was first isolated from bile.
The structure of cholesterol (C27H46O) is Depicted in Fig.3.5. It has one hydroxyl group at C3 and a
double bond between C5 and C6.An 8 carbon aliphatic side chain is attached to C17. Cholesterol
contains a total of 5 methyl Groups. Due to the presence of an –OH group, Cholesterol is weakly
amphiphilic. As a structura Component of plasma membranes, cholesterol Is an important
determinant of membrane Permeability properties. The occurrence of Cholesterol is much higher in
the membranes of Sub-cellular organelles. Cholesterol is found in association with fatty Acids to
form cholesteryl esters (esterification Occurs at the OH group of C3).
Properties and reactions : Cholesterol is an Yellowish crystalline solid. The crystals, under The
microscope, show a notched Appearance. Cholesterol is insoluble in water And soluble in organic
solvents such as Chloroform, benzene, ether etc Several reactions given by cholesterol are Useful for
its qualitative identification and Quantitative estimation. These include Salkowski’s Test,
Liebermann-Burchard reaction and Zak’s Test.
Functions of cholesterol : Cholesterol is a Poor conductor of heat and electricity, since it Has a high
dielectric constant. It is present in Abundance in nervous tissues. It appears that Cholesterol
functions as an insulating cover for The transmission of electrical impulses in the Nervous tissue.
Cholesterol performs several Other biochemical functions which include its Role in membrane
structure and function, in the Synthesis of bile acids, hormones (sex and Cortical) and vitamin D
charged groups (e.g. COO–) of Acidic amino acids with positively Charged groups (e.g.
Van der Waals forces : These are the Non-covalent associations between Electrically neutral
molecules. They are Formed by the electrostatic interactions Due to permanent or induced dipoles
ETC Inhibition
Compounds that inhibit electron transport, as judged by their effect on O2 consumption, include
rotenone (a plant toxin used by Amazonian Indians to poison fish and which is also used as an insec-
ticide), amytal (a barbiturate), antimycin A (an antibiotic), and cyanide.
chemiosmotic theory
The chemiosmotic theory, proposed in 1961 by Peter Mitchell, spurred o siderable controversy before
becoming widely accepted (Box 18-2). Mitchell theory states that the free energy of electron transport is
conserved by pumpeng H from the mitochondrial matrix to the intermembrane space to create an elec
trochemical H gradient acress the inner mitochondrial membrane. The electr chemical potential of this
gradient is harnessed to synthesize ATP (Fig. 18-20) Several key observations are explained by the
chemiosmotic theory
Lipids have numerous biological applications across various biological processes and
systems. Here are some key biological applications of lipids:
Overall, lipids play diverse and essential roles in biology, contributing to cellular structure,
energy metabolism, signaling, and many other physiological processes.
Homeostasis is the process by which living organisms maintain a stable internal
environment despite external fluctuations. It involves the regulation of various physiological
parameters, such as body temperature, blood pH, blood glucose levels, and ion
concentrations, within narrow ranges that are compatible with life.
Overall, homeostasis is essential for the survival and proper functioning of living organisms.
It ensures that cells and tissues receive the optimal conditions necessary for their metabolic
activities, thereby promoting health, stability, and overall well-being.