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NIM: 4193342003
4. In order to investigate the animal taxonomy, today the scientist more use DNA barcoding
approach, especially by using mtCOI DNA gene as marker. Describe the procedures that
must be done regarding the species name finding by blasting into gen Bank NCBI.
ANSWER:
Use the BLAST score only as a rough guide to the identity of the source organism
from which the sequence originated.Assign the source organism to the same taxonomic
rank as the best BLAST hit only at the genus level or higher, depending on consistency
among best hits:Assign the source organism to a genus if the best score involves taxa
from that genus.Name the source organism using the next highest ranking (family, order,
class or phylum) which includes all the best hits if there is inconsistency between best
hits regarding genus identity.The source organism should be named 'bacterium <strain>'
(for the Bacteria domain) OR 'archaeon <strain>' (for the Archaea domain) if there is
uncertainty regarding the exact phylum
Check the "taxonomy report" provided with BLAST results. The initial report presents
the information in the definition field of the associated sequence records.Although this
field should be updated if there is a change in the taxonomic name or lineage of the
organism of origin in the record, the complete individual sequence record should be
checked to ensure that proper taxonomic information is used in the field definition.Note:
species names can be assigned to the source organism only if a species specific primer is
used during amplification. If not, you must use a genus level or higher rank to name the
organism.
5. Describe the preventative actions that must be done in order to minimize the infection of
following worms on human being: Clonorchis sinensis, Schistosoma spp., Taenia solium,
Taenia saginata, Ancylostoma duodenale, Ascaris lumbricoides, Enterobius vermicularis
and Wuchereria bancrofti.
ANSWER:
Must be hygienic, infectious worm infections from food that has been
contaminated with tapeworm larvae or eggs. Therefore, make sure the food you buy,
store, and eat must be hygienic. Keep food in a closed place, do the same thing when
storing it in the refrigerator.Never eat fruit or vegetables without washing them
beforehand. If necessary, process the vegetables by boiling or cooking them up to the
eyes. Apart from being contaminated by tapeworms, fruits and vegetables may still
contain chemical compounds from pesticide sprays.Avoid raw foods eating raw food may
be very tempting for some people. However, the fact is that tapeworm infection can be
transmitted through raw food. Raw food leaves a variety of bacteria and germs in it,
especially meat.Always wash your hands with clean water and soap before every meal,
before cooking and providing food, after defecating, and after touching the ground,wash
fruits and vegetables thoroughly before consumption,make sure the food is completely
cooked before consumption,try to only drink bottled water that is still sealed when
traveling. If not available, bring the water to a boil before drinking it.
6. Write in correct form the following animal name according to IZCN rule and giving the
some reasons.
a) chyrsoma sp
b) porifera
c) trigona chanchamayoensis
d) ophiocrossota multispinaljungman 1867