This summary provides the high level information from the developmental biology exam study guide document in 3 sentences:
The document provides a study guide for exam #1 covering topics related to developmental biology including autonomous specification, cadherins, chromatin immunoprecipitation sequencing, gene regulation, genomic imprinting, homologous structures, microRNAs, and histone proteins. The guide lists key terms and concepts with short definitions or details to aid in preparation for the exam. It tests knowledge of developmental processes and molecular mechanisms that govern gene expression and cell differentiation during embryogenesis.
This summary provides the high level information from the developmental biology exam study guide document in 3 sentences:
The document provides a study guide for exam #1 covering topics related to developmental biology including autonomous specification, cadherins, chromatin immunoprecipitation sequencing, gene regulation, genomic imprinting, homologous structures, microRNAs, and histone proteins. The guide lists key terms and concepts with short definitions or details to aid in preparation for the exam. It tests knowledge of developmental processes and molecular mechanisms that govern gene expression and cell differentiation during embryogenesis.
This summary provides the high level information from the developmental biology exam study guide document in 3 sentences:
The document provides a study guide for exam #1 covering topics related to developmental biology including autonomous specification, cadherins, chromatin immunoprecipitation sequencing, gene regulation, genomic imprinting, homologous structures, microRNAs, and histone proteins. The guide lists key terms and concepts with short definitions or details to aid in preparation for the exam. It tests knowledge of developmental processes and molecular mechanisms that govern gene expression and cell differentiation during embryogenesis.
1. Autonomous 1. predominates in most 12. The DNA methylation true
specification invertebrates pattern in the zygote 2. is the process of specification by becomes modified during differential acquisition of certain the process of cytoplasmic molecules present in differentiation the egg 13. Enhancers can 1. signal where and when a 3. produces mosaic development promoter can be used and i.e. cells cannot change fate if a how much product to make blastomere is lost 2. control efficiency and rate 2. Cadherin can have a catenins of transcription from a specific cytoplasmic region that promoter binds directly to: 3. interact with distal promoters in a highly 3. Cadherins function via 1. Cadherins on adjacent cells selective manner direct binding between 2. Catenins which anchor 4. activate genes on the same cadherin molecules on cadherins chromosome i.e. cis regulation one cell and 14. Eukaryotic genes expressed False. Transcription factors 4. Casein mRNA stability will degrade over time but will do in specific cell types are influence transcription in both so much faster in the absence of regulated by enhancer time and space prolactin sequences that influence 5. Cells tend to form 1. to reflect their respective gene transcription in both aggregate positions in the embryo time and space. This 2. to show selective affinity statement is: 6. Chimeric quail-chicken Trace cell fate 15. Futile cycle mutants fail to 1. consistently show only two animals are generated go through pronuclear labeled nuclei to fusion 7. Chromatin Immuno- 1. used to identify enhancer 16. Gene activation can result a. Histone modification Precipitation elements by sequencing DNA from (acetylation) Sequencing is regions bound by specific 17. Genomic imprinting is the 1. genes from one parent are transcription factors phenomenon by which not always equivalent to 8. c-Kit mutations lead to Piebald genes from the other parent 9. Degradation of mRNA a. MicroRNAs can act as e.g. a mutant gene may not be molecules translational inhibitors, binding to expressed if it is not derived the 3′ UTR of the RNA. from the right parent b. The microRNA recruits an RNA- 2. only the sperm-derived or induced silencing complex that only the egg-derived allele of either prevents translation or leads the gene is expressed, to the degradation of the mRNA sometimes due to inactivation of one allele by DNA 10. Developmental 1. chemicals methylation during abnormalities can 2. viruses spermatogenesis or oogenesis result from exposure to 3. radiation exogenous agents 4. hyperthermia 18. Highest transcriptome a. organogenesis (lecture) including collectively known as tetratogens similarities among vertebrates occurs during 11. Different combination True of transcription factors can induce cells to acquire different fates 19. Homologous structures 1. are organs whose 28. Mi430 in Zebrafish 1. promotes deadenylation and underlying similarity clearance of maternal mRNAs arises from the being 2. plays a major role in clearing derived from a maternally derived transcripts as common ancestral zebrafish blastula transitions to structure zygotic control during gastrulation 2. can differentiate by 29. Micro mRNA inhibit inhibition of translation or altering development translation by elongation and these changes provide the variation 30. miRNA can 1. probably modulate 50% of the needed for protein-encoding genes in our evolutionary change bodies 2. Be in independent transcription 20. How many types of histone four units or reside in introns of other proteins are in a condensed genes nucleosome? 3. Inhibit expression of specific 21. If the surface tension of (b) is 1. if there is more genes by degrading their mRNA stronger that (a) cells will likely surface tension in b, (RNA interference) segregate as in the cells will migrate 4. Small (about 22 nucleotide) more centrally towards RNAs complementary to a portion b of a particular mRNA that regulates translation of a specific message. 22. In Situ hybridisation and immune 1. it enables MicroRNAs usually bind to the 3′ labelling using antibodies are visualization of spatial UTR of mRNAs and inhibit their techniques respectively used to and temporal patterns translation. label m-RNA and proteins. Which of specific gene of the following statements is expression 31. A mouse cloned from have a defective immune system true? 2. cells in a tissue nuclei derived from a squash are B or T lymphocyte will immobilized under a 32. Mutations affecting a Developmental phenotypes thin layer of agar splicing site can lead 23. Maternal mRNA in the developing the transition to to: Zebrafish is cleared as the result zygotic control during 33. Mutations affecting termination codons which lead to of gastrulation myostatin genes lead truncated proteins (non-functional 24. The mediator complex regulates RNA to proteins) and leads to over elongation production of muscles i.e. hyperplasia and hypertrophy 25. Methylated DNA 1. Repress gene expression 34. Non uniform mRNA a. maternal effect genes and how 2. Blocks binding of distribution within a impact polarity of cell (mRNAs transcription factors to cell can result from translated) enhancers (cannot bind 35. The outcome of mixing epidermal cells covering the neural if methylated) neural plate cells and cells 26. Methylation of histone H3 can 1. highly repressed epidermal cells results result in chromatin in a sphere of cells 2. activation with the 27. Methylation of histones occurs on 1. lysine 36. The outer layer of the Ectoderm the amino acid 2. true embryo is produced by which primary germ layer? 37. Pioneer 1. are able to bind to heterochromatin 47. Which nucleobase is cytosine transcription (condensed chromatin) and open them commonly found in factors up transcriptionally repressed 2. recruit other transcription factors and genes? histone modifying enzymes and allow 48. Which of the following 1. differentiation access to promoters cellular events is crucial for 2. commitment (specification 38. The posterior Caudal gene which codes for a bat wing formation? & determination) region of the homeodomain transcription factor 49. Which of the following 1. fertilization is external drosophila characteristics makes the 2. gametogenesis and oocyte contains frog a good animal model for fertilisation are seasonal relatively high the study of development? events levels of which 3. volume of frog egg active protein? remains the same throughout 39. Quail cells differ a. Species specific proteins form immune cleavage from chick cells system 4. display some of the most for: b. Heterochromatin dramatic of vertebrate life i. quail: single large nuclei cycles ii. chick: diffused nuclei 50. Which of the following a. Genomic equivalence: the 40. Reprogramming reprogrammed into induced pluripotent concepts is true (somatic theory that every cell of an of somatic cells stem cells state by forced expression of cells and genome...) organism has the same can be Oct3/4, Sox2, Klf4, c-Myc genome as every other cell. b. somatic nuclei contain all 41. RNA transcripts splicing information needed to are translated generate complete animal into an active protein after 51. Which of the following a. Canonical WNT pathway processes is utilised for (beta-catenin dependent) 42. Splice variants of a. self-avoidance in dendrites (lecture) modulation of gene b. Transcription factors the Drosophila b. non-variant creates 38,016 proteins expression? c. Histone/DNA methylation DsCam d. Acetylation (activating) 43. A syndrome is a condition in which two or more e. enhancers/silencers malformations are expressed together 52. Which of the following selective activation of mRNA 44. Tissue specific 1. by elements that can be identified by sentences better defines translation expression of fusing reporter genes to suspected what ribosomal selectivity is? genes can be enhancer regions of the genes expressed 53. Which one of the listed histone methyltransferase controlled in particular cell types proteins has a role in 2. by enhancer modularity wherein genes keeping chromatin having multiple, separate enhancers condensed? allow a protein to be expressed in several different tissues 54. Which process is utilised cell-to-cell adhesion i.e. during tissue juxtacrine interactions 45. To de- cell programming morphogenesis? paracrine interactions differentiate mechanical interactions somatic cells into endocrine interactions a pluripotent stem cell 46. Transcription Bind DNA and regulate gene factors can transcription (RNA synthesis) via activation or suppression. Some transcription factors stabilize RNA polymerase II binding to the DNA, and some disrupt nucleosomes, increasing the efficiency of transcription. 55. Whittaker experiment on tunicates 1. there is autonomous specification in the early tunicate embryo proved that 2. there is cytoplasmic segregation of tissue determinants in early tunicate embryos 3. cell fate is determined by a set of critical determination factors within the egg cytoplasm i.e. each cell knows its fate