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Edited by
Kuldeep Bauddh
Department of Environmental Sciences,
Central University of Jharkhand, Ranchi, Jharkhand, India
Ying Ma
Centre for Functional Ecology,
Department of Life Sciences,
University of Coimbra, Coimbra, Portugal
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ISBN: 978-0-12-823443-3
Contributors...........................................................................................................................................xv
Zaira Khalid
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
Prem Chand Kisku
School of Environment and Earth Sciences, Department of Geology, Central University of Punjab,
Bathinda, Punjab, India
Anup Kumar
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
Vipin Kumar
Department of Environmental Science & Engineering, Indian Institute of Technology (Indian
School of Mines), Dhanbad, Jharkhand, India
Vineet Kumar
Department of Biotechnology, School of Sciences, Chhatrapati Shahu Ji Maharaj University,
Kanpur, UP, India
Amit Kumar
Department of Botany, Lucknow University, Lucknow, India
Manoj Kumar
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand,
India
Sanjeev Kumar
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand,
India
Narendra Kumar
Department of Environmental Sciences, Babasaheb Bhimrao Ambedkar University, Lucknow,
UttarPradesh, India
Raushan Kumar
Central University of Jharkhand, Environmental Sciences, Ranchi, Jharkhand, India
Khushbu Kumari
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
Priyanka Kumari
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
Muhammad Laiq
Department of Botany, University of Malakand, Chakdara, Dir Lower, Khyber Pakhtunkhwa,
Pakistan
Anissa Lounès-Hadj Sahraoui
Univ. Littoral Côte d’Opale, Unité de Chimie Environnementale et Interactions sur le Vivant
(UCEIV-UR 4492), SFR Condorcet FR CNRS 3417, Calais cedex, France
Ying Ma
Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Coimbra,
Portugal
xviii Contributors
Lala Saha
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand,
India
Ganesh Dattatraya Saratale
Department of Food Science and Biotechnology, Dongguk University-Seoul, Ilsandong-gu,
Goyang-si, Gyeonggi-do, Republic of Korea
Gauri Saxena
Department of Botany, Lucknow University, Lucknow, India
Mehran Shirvani
Department of Soil Science, College of Agriculture, Isfahan University of Technology, Isfahan,
Iran
Bhaskar Singh
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
Shreya Singh
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand,
India
Ritu Singh
Department of Environmental Sciences, Central University of Rajasthan, Ajmer, Rajasthan, India
Soni Kumari Singh
Department of Life Sciences, Central University of Jharkhand, Ranchi, India
Ravi Prakash Srivastava
Department of Botany, Lucknow University, Lucknow, India
Ankit Abhilash Swain
Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand,
India
Preetanshika Tracy
Department of Environmental Microbiology, Babasaheb Bhimrao Ambedkar University, Lucknow,
Uttar Pradesh, India
Olga Turkovskaya
Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of
Sciences, Saratov, Russia
Abid Ullah
Department of Botany, University of Malakand, Chakdara, Dir Lower, Khyber Pakhtunkhwa,
Pakistan
Pramila Devi Umrao
Department of Biotechnology, School of Sciences, Chhatrapati Shahu Ji Maharaj University,
Kanpur, UP, India
xx Contributors
Neha Vishnoi
Department of Environmental Microbiology, Babasaheb Bhimrao Ambedkar University, Lucknow,
Uttar Pradesh, India
Zahra Yahaghi
Department of Soil Science, College of Agriculture, Isfahan University of Technology, Isfahan,
Iran
Chang Zhang
Chuzhou University, Chuzhou, China
PART
Overview of
microbe-assisted
phytoremediation
1
1. Microbe-assisted phytoremediation of environmental contaminants . . . . . . . . . . . . . . . . . . . . . 3
2. Microbial augmented phytoremediation with improved ecosystems services . . . . . . . . . . . . . . . . 27
3. Role of genetic engineering in microbe-assisted phytoremediation of polluted sites . . . . . . . . . . . . 63
4. Phytoremediation potential of genetically modified plants . . . . . . . . . . . . . . . . . . . . . . . . . 85
CHAPTER
Microbe-assisted phytoremediation
of environmental contaminants
dDepartment of Food Science and Biotechnology, Dongguk University-Seoul, Ilsandong-gu, Goyang-si, Gyeonggi-do,
Republic of Korea
eDepartment of Biochemistry, School of Applied Sciences, REVA University, Bangalore, India
Chapter outline
1.1 Introduction........................................................................................................................................ 4
1.2 Environmental contaminants: Types, nature, and sources...................................................................... 5
1.3 Impact of environmental contaminants on the environment and human health....................................... 7
1.4 Plant-microbe association/interaction and its role in phytoremediation
of environmental contaminants............................................................................................................ 8
1.4.1 Phytoremediation of organic and inorganic contaminants..................................................8
1.4.2 Phytoremediation of wastewater....................................................................................14
1.4.3 Role of constructed wetlands in treatment of wastewaters...............................................15
1.5 Mechanisms involved in the phytoremediation of environmental contaminants.................................... 16
1.5.1 Phytostabilization........................................................................................................16
1.5.2 Phytovolatilization.......................................................................................................17
1.5.3 Phytodegradation........................................................................................................17
1.5.4 Phytoaccumulation......................................................................................................17
1.5.5 Phytoextraction...........................................................................................................18
1.5.6 Rhizoremediation........................................................................................................18
1.6 Economic importance of microbe assisted phytoremediation of environmental contaminants................ 21
1.7 Conclusion....................................................................................................................................... 21
1.1 Introduction
Nowadays, the concern of environmental contamination has increased due to the high production
demand of rapid population growth, which prompts the generation of plenty of waste and environmental
contaminants. The toxic heavy metals, greenhouse gases, oil spillages, nonbiodegradable materials,
unutilized fertilizers, pesticides, and other hazardous materials are the main source of environmental
contamination (Kishor et al., 2020). Endocrine disruptors (EDs), pharmaceuticals, pesticides,
hormones, toxins and industrial wastewaters also contribute majority of environmental contamination
(Rasheed, Bilal, Nabeel, Adeel, & Iqbal, 2019). The long-term susceptivity to these environmental
contaminants might have counter health effects like organ dysfunction, cancer, physical, psychological,
neurological disorders, and compromised immunity (Godduhn & Duffy, 2003). Thus subsequently,
the remediation of contaminated area is mandatory in order to retain the area and to reduce the
entrance of toxins into the food chain (Hooda, 2007). Contaminants from water and soil can be
remediated by various methods, but most of these are expensive, labor-consuming, and require on-
site renovation through chemical or physical methods (Kishor, Bharagava, & Saxena, 2018). Due to
these drawbacks, the scientists had developed some eco-friendly technologies using microorganism
and plants or with combination of both for the elimination of toxins from contaminated soil and
water (Glick, 2003).
Bioremediation is a method which practices microbes (bacteria, yeast algae, and fungi) used for
the remediation of contaminated soil and water. In this innovation, the proliferation of native consortia
(microbial) is endorsed aimed at chosen movement by monitoring abiotic and biotic conditions for
contaminated sites (Weyens et al., 2015). Microbes are recognized to be principal microbe groups form
symbiotic associations with plants as shown in Fig. 1.1. Microorganisms play a major role in nitrogen,
fixation phosphate solubilization and mobilization, nutrient management, probiotics and biotic elici-
tors, biodegradation agents. Various, fungi, algae and bacterial strains have been explored for the man-
agement of hazardous organic and inorganic waste including heavy metals produced by various indus-
tries (Basit, Shah, Ullah, Muntha, & Mohamed, 2021). Microorganisms are responsible for the health
of the plant, crop production, and phytoremediation for knocking out pollution load in environmental
monitoring. The important perception of microbe assisted phytoremediation is to effectively remediate
contaminants from the environment using both plant and microbes. The technique has great potential in
the tropics, as it favours plant growth and enhancing microbial activity due to climatic conditions (Liu,
Yang, Liang, Xiao, & Fang, 2020).
“The degradation of organic contaminants using microbes and plants is termed phytodegradation”.
Also, microbes are used for increasing the efficiency of organic contaminant degradation in the root
zone and are termed as rhizodegradation (Basit et al., 2021). For example, mycorrhiza (a beneficial as-
sociation between a fungus and the roots of vascular plants) are effective recalcitrant polymers recyclers
of lignin. By the application of filamentous or unicellular fungi reduction of harmful wastes from the
environment is performed. Some microbe and plant species can be used for heavy metal remediation.
Plant Ricinus communis cultivated in the presence of Pseudomonas sp. M6 was found tolerant to
nickel, Eichhornia crassipes cultivated in presence of Pycnoclavella diminuta found tolerant to resis-
tant to chromium, Cajanus cajan and Proteus vulgaris KNP3 found tolerant to copper (Rai, Kim, Lee,
& Lee, 2020). Fungi (AMF) Glomus mosseae and plant species Vetiveria zizanioides found tolerant to
iron, copper, cadmium, lead, and zinc (Kafil, Boroomand Nasab, Moazed, & Bhatnagar, 2019). Jampasri
et al. (2020) reported that the tolerance of C. odorata and M. luteus to moderate concentrations of lead
1.2 Environmental contaminants: Types, nature, and sources 5
and fuel oil made them extremely good applicants of bacteria-assisted phytoremediation of lead-fuel
oil cocontaminated soils (Sharma, 2021).
It is perceived that plant-microbe interaction plays a significant aspect during remediation by de-
grading, detoxifying or sequestrating the contaminants by promoting plant growth (Weyens et al.,
2015). It was reported that microbe assisted phytoremediation is a cost-effective, ecofriendly, nonintru-
sive, esthetically pleasing, and informally recognized sustainable expertise meant for the remediation
of contaminated soil or water areas (Alkorta & Garbisu, 2001). The microbe assisted phytoremediation
of contaminants involves phytoextraction, phytovolatilization phytostabilization, and rhizofiltration
(Glick, 2003). The purpose of this chapter is to confer the probable and limitations of remediation by
microbe-assisted phytoremediation of environmental contaminants including wastewater.
(Kishor et al., 2020). The contaminants may be natural or xenobiotic in nature. The common
environmental contaminants are PAHs, heavy metals, pesticides, organic, and inorganic solvents. The
discharge of these contaminants leads to environment contamination which leads to human health
problems. The contaminants generally may be classified into two categories: inorganic and organic
(Kishor et al., 2018).
Natural processes like continental dust, volcanic eruptions and anthropogenic activities as combus-
tion of phosphate fertilizers, mining, fossil fuel combustion, metal industries lead to release of environ-
mental contaminants and heavy metal accumulation in environment (Parmar, Dave, Sudhir, Panchal,
& Subramanian, 2013). While, metals are the natural elements of the earth’s crust, their increasing
concentration is harmful to ecological and human receptors (Kishor et al., 2020). Most of compounds
and their elemental metals are enormously constant in the atmosphere. This metal-containing particu-
late matter could be distributed to significant distances by water also by wind. Organic contaminants
are carbon-based compounds that are resilient to natural degradation conditions therefore, stay in the
environment throughout significant stretches of time like pesticides, industrial chemicals, PAHs, POPs
(Dzantor & Beauchamp, 2002). Because of high stability besides distant transportation, these contami-
nants contaminate water, air and the soil ecosystem where they are bioaccumulated by plants and living
organisms. The first apparent revealed was in 1970 when polar bears were found to bioaccumulated
pesticides in their fat tissues (Arslan, Imran, Khan, & Afzal, 2017). In human, the long exposure and
accumulation of these contaminants can be prompt to metabolic disorders, cardiovascular diseases,
physical health illness, and severe damage to fetus growth (Thakur & Pathania, 2020).
The characteristics and nature of industrial effluent relies upon “the type of industry, raw materi-
als used, processes applied, and product quality” (Saxena & Bharagava, 2017). Different industries
regularly release high-strength wastewaters, which is categorized by increased level of total suspended
solids (TSSs), chemical oxygen demand (COD), biochemical oxygen demand (BOD), and total dis-
solved solids (TDSs) various organic/inorganic contaminants (Saxena & Bharagava, 2017). Phenolics
are the most common contaminants related to industrial wastewater, herbicides, and pesticides, which
utilized in manufacturing chemicals like alkylphenols, xylenols, cresols, aniline, phenolics, pesticides,
resins, dyes, explosives, and other compounds (Kishor et al., 2018).
Persistent organic pollutants are carbon-based chemicals having different physical and chemical
properties, which are resistant to environmental degradation through chemical, biological, and pho-
tolytic processes because of their persistence for long time in the environment (Thakur & Pathania,
2020). Endocrine disruptors are used in industries as plasticizers, plastic resins (cellulosic/polyure-
thane and polymers polyvinyl resins). “PCBs are hydrophobic, low vapor pressure, less water-soluble
and highly soluble in organic solvents, fats, and oils. PCBs are resistant to acids, bases, oxidation,
hydrolysis, and temperature change and are widely used in industries. They can produce enormously
poisonous chemicals such as dibenzodioxins and dibenzofurans through partial oxidation. PCBs can
penetrate skin, polyvinyl chloride (PVC), and latex and show toxic effects (Thakur & Pathania, 2020).
Azo dyes are synthetic recalcitrant dyes used nearly in every industry such as pharmaceutical, food,
tannery, textile, acrylic, plastics, and cosmetics.
Petroleum hydrocarbons are the source of refinery industrial wastewaters. The most well-known
“petroleum hydrocarbons incorporate aliphatic, branched, and cycloaliphatic alkanes as well as mono-
cyclic and PAHs, which comprise of naphthalene, anthracene, fluorene, phenanthrene, pyrene, fluoran-
thene, benzo[a]anthracene, and benzo[a]pyrene” (Rabbani et al., 2021). Pesticides, herbicides, fungi-
cides and insecticides are utilized in agricultural practices to unwanted plants, control pests, fungi and
1.3 Impact of environmental contaminants on the environment and human health 7
crop destroying insects respectively, which optimize crop productivity (Sarma, Nava, & Prasad, 2019).
Pesticides like dichlorodiphenyltrichloroethane (DDT), aldrin, endrin, heptachlor, chlordane, mirex,
hexachlorobenzene, dieldrin, and toxaphene, fungicides such as hexachlorobenzene, pentachlorophe-
nol, and benzothiazole. Herbicides like 2,4-D, atrazine, picloram, chlorophenyl compounds insecticide
such as inorganic contaminants wastewater containing cadmium utilized in rechargeable batteries, spe-
cial alloy production, plastic stabilizer and also present in tobacco smoke (Thakur & Pathania, 2020).
Industries like metallurgical, refractory brick, chemical, tannery, dyes, and wood preservation are
the significant consumers of chromium (Cr). Lead (Pb) the major contaminant of soil and water mostly
occurs from human derived activities, smelting and mining, industrial, batteries, gasoline, pesticides,
paints, and explosives. “The major sources of Hg exposure include its use in thermometers, dental
amalgams, sphygmomanometers, fossil fuels emissions, barometers, incandescent lights, ritualistic
practices using mercury, batteries and the incineration of medical waste” (Bharagava, Saxena, Mulla,
& Patel, 2018).
heavy metals might strictly restrict in the degradation and reduction of organic substances. Numerous
harmful human activities stated above discharge toxic metals and metalloids cause soil contamination
by extreme accumulation or depositions. Several heavy metals are carcinogenic to humans and ani-
mals and can cause DNA damage probably because of their mutagenic ability (Sivaram, Logeshwaran,
Lockington, Naidu, & Megharaj, 2019). The clean-up of contaminated sites is extensively important in
order to reclaim the contaminated area and to diminish the entry of toxins into the food chain. Naturally
atmosphere gets contaminated through indirect or direct revelation of heavy metals released in aquatic
bodies which reduces soil fertility and water quality respectively which ultimately affects plants and
aquatic life and further human health. Various toxic environmental contaminants with their sources of
emittance having effect on environment and human health are listed in tabular form (Table 1.1).
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