Professional Documents
Culture Documents
(Download PDF) Epithelial Cell Culture Methods and Protocols Methods in Molecular Biology 2749 Mario Baratta Online Ebook All Chapter PDF
(Download PDF) Epithelial Cell Culture Methods and Protocols Methods in Molecular Biology 2749 Mario Baratta Online Ebook All Chapter PDF
https://textbookfull.com/product/3d-cell-culture-methods-and-
protocols-methods-in-molecular-biology-2764-2nd-edition-zuzana-
sumbalova-koledova/
https://textbookfull.com/product/stem-cell-renewal-and-cell-cell-
communication-methods-and-protocols-methods-in-molecular-
biology-2346-kursad-turksen-editor/
https://textbookfull.com/product/cancer-cytogenetics-methods-and-
protocols-methods-in-molecular-biology-1541-desconocido/
https://textbookfull.com/product/neurobiology-methods-and-
protocols-methods-in-molecular-biology-2746-sebastian-dworkin/
Xylem Methods and Protocols Methods in Molecular
Biology 2722 Javier Agusti
https://textbookfull.com/product/xylem-methods-and-protocols-
methods-in-molecular-biology-2722-javier-agusti/
https://textbookfull.com/product/teratogenicity-testing-methods-
and-protocols-methods-in-molecular-biology-2753-luis-felix/
https://textbookfull.com/product/mucins-methods-and-protocols-
methods-in-molecular-biology-2763-1st-edition-kameyama/
https://textbookfull.com/product/cancer-stem-cells-methods-and-
protocols-methods-in-molecular-biology-2777-papaccio/
https://textbookfull.com/product/transmembrane-%ce%b2-barrel-
proteins-methods-and-protocols-methods-in-molecular-
biology-2778-ieva/
Methods in
Molecular Biology 2749
Epithelial
Cell Culture
Methods and Protocols
Second Edition
METHODS IN MOLECULAR BIOLOGY
Series Editor
John M. Walker
School of Life and Medical Sciences
University of Hertfordshire
Hatfield, Hertfordshire, UK
Second Edition
Edited by
Mario Baratta
Department of Chemistry, Life Sciences and Environmental Sustainability,
University of Parma, Parma, Italy
Editor
Mario Baratta
Department of Chemistry, Life Sciences
and Environmental Sustainability
University of Parma
Parma, Italy
This Humana imprint is published by the registered company Springer Science+Business Media, LLC, part of Springer
Nature.
The registered company address is: 1 New York Plaza, New York, NY 10004, U.S.A.
Epithelial cell culture has emerged as a cornerstone technique in the field of cell biology,
providing invaluable insights into the fundamental mechanisms underlying various physio-
logical processes. It is with great pleasure and excitement that we present the second edition
of Epithelial Cell Culture: Methods and Protocols, which builds upon the success of the first
edition and further delves into the dynamic world of epithelial cell research.
In this edition, we have taken a meticulous approach to ensure the integration of
chapters from the previous edition (Chaps. 2, 3, 5, 9, 10) while also incorporating
new issues that have surfaced since the first edition. The rapid advancements in cell culture
methodologies and the ever-evolving understanding of epithelial cell biology have paved the
way for novel techniques and applications. As such, this edition reflects the latest cutting-
edge research, ensuring that our readers are equipped with the most up-to-date knowledge
in the field.
An essential hallmark of this volume is the comprehensive representation of epithelial
cell culture models from different mammalian species. As our understanding of cellular
biology becomes more intricate, the need to explore diverse organisms becomes imperative.
Hence, in this book, you will find detailed methodologies applicable to epithelial cells
derived from primates, pigs, bovines, and laboratory animals. This expansion in scope allows
researchers and students alike to grasp the nuances of comparative biology, fostering a
deeper appreciation of species-specific variations in cellular behavior.
Epithelial Cell Culture: Methods and Protocols, Second Edition is not limited to conven-
tional cell culture techniques; rather, it transcends boundaries by delving into the manipula-
tion and differentiation of epithelial cells. As cellular engineering and regenerative medicine
hold the promise of transformative medical therapies, understanding cellular behavior at this
level of granularity becomes paramount. Therefore, the inclusion of these advanced meth-
odologies is a reflection of our commitment to equipping researchers with the knowledge
and tools needed to push the boundaries of scientific exploration.
Recognizing the growing significance of the gastroenteric system in human medicine
and nutrition, we have dedicated special attention to epithelial cell models in this vital
system. Epithelial cells lining the gastrointestinal tract play a crucial role in nutrient absorp-
tion, maintaining barrier integrity, and orchestrating interactions with the complex gut
microbiome. As emerging research continues to reveal the intricate interplay between the
gut epithelium and human health, we felt compelled to offer a dedicated section that
addresses the unique challenges and opportunities presented by this essential system.
This second edition volume aspires to be more than just a reference guide; it aims to be a
source of inspiration and knowledge that empowers researchers to push the boundaries of
cellular science. We believe that the collective efforts of scientists and students in this field
hold the key to unlocking groundbreaking medical discoveries, improving human health,
and advancing our understanding of life itself.
We extend our heartfelt gratitude to all the contributors and researchers who have
generously shared their expertise, making this second edition possible. Their collective
dedication has enriched this volume and enabled it to become a cornerstone resource in
the realm of epithelial cell culture.
v
vi Preface
Finally, we hope that the scientific community, educators, and students will find this
edition to be a valuable companion in their journey to unravel the complexities of epithelial
cell biology, cultivate curiosity, and inspire the next generation of groundbreaking research.
Preface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . v
Contributors. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ix
vii
viii Contents
Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 185
Contributors
ix
x Contributors
MAURA TURRIANI • Faculty of Bioscience and Technology for Food, Agriculture and
Environment, University of Teramo, Teramo, Italy
AKSHAYA UPADHYAY • McGill Laboratory of Craniofacial Tissue Engineering and Stem Cells,
Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montreal, QC,
Canada
DANIELE VIGO • Department of Veterinary Medicine and Animal Sciences, University of
Milan, Milan, Italy
IRENE VIOLA • Department of Veterinary Sciences, University of Torino, Turin, Italy
HONGBING WANG • Department of Pharmaceutical Sciences, University of Maryland School
of Pharmacy, Baltimore, MD, USA
DANIELLE WU • Department of Diagnostic and Biomedical Sciences, The University of Texas
Health Science Center at Houston, Houston, TX, USA; Department of Bioengineering,
Rice University, Houston, TX, USA
SIMON YOUNG • Katz Department of Oral and Maxillofacial Surgery, The University of
Texas Health Science Center at Houston, Houston, TX, USA
Chapter 1
Abstract
Primary cell culture systems are widely used as a valuable method for analyzing the biological functions of
specific cells in vitro. Recently, various serum-free primary cell culture methods have been developed that do
not involve the use of animal serums. Since the thymus is comprised of many cell types, such as thymocytes,
thymic epithelial cells, macrophages, and fibroblasts, thymic epithelial cells must be isolated for their
functional analysis in vitro. This chapter describes the detailed protocol for the selective primary culture
of thymic epithelial cells using defined serum-free medium.
Key words Thymic epithelial cells, TECs, Collagenase, Primary cell culture, Serum-free medium
1 Introduction
Mario Baratta (ed.), Epithelial Cell Culture: Methods and Protocols, Methods in Molecular Biology, vol. 2749,
https://doi.org/10.1007/978-1-0716-3609-1_1,
© The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature 2024
1
2 Yasuhiro Adachi
2 Materials
2.5 Culture in 1. 0.1% gelatin-coated sterile culture dishes: 35, 60 mm, chamber
Serum-Free Medium slides.
2. Sterile micro-forceps.
3. Micropipettes with 200 and1000 μL tips (see item 2,
Subheading 2.4).
4. Culture medium (see item 5, Subheading 2.2).
5. Trypsin/ethylenediaminetetraacetic acid (EDTA).
6. 1 mg/mL trypsin inhibitor.
7. Incubator set at 37 °C and 5% CO2.
8. Refrigerated centrifuge precooled at 4 °C.
3 Methods
Fig. 1 Dissection of the thymus obtained from newborn mice. Panel A: front view of thoracic organs. Anterior
thoracic wall has been removed. T: thymus; H: heart; L: lung; d: diaphragm; and li: liver. Panel B: dissected
thymus (“T” in panel A) before trimming in 1× PBS (-). Bar = 3 mm
3.3 Culture in 1. Add growth supplements (EGF, INS, HC, and CT) to the
Serum-Free Medium basic medium stored on ice to prepare the required volume of
culture medium.
2. Aspirate 0.1% gelatin in culture wells, wash wells with same
volume of 1 × PBS (-) once, and add culture medium to
each well.
3. Resuspend the enzymatically dissociated thymus fragments in
culture medium, and add to the well in equal volumes. Place
and arrange the thymus fragments evenly in a culture well with
sterile micro-forceps (see Note 5).
Thymic Epithelial Cell Culture 5
4 Notes
• Switch the unit off. Remove the Snapwell® and replace in its
original plate well. Aspirate the measuring solution from the
EndOhm lower chamber, and then replace with fresh solution.
Repeat the procedure for all samples.
• After the final measurement, perform another background resis-
tance measurement on the blank Snapwell®.
• If further growth is intended for measured cultures, aspirate off
measuring medium, and replace with GM before returning to
incubator.
• Switch off the meter, detach the connectors, aspirate recording
solution from EndOhm-24SNAP chamber, and then rinse elec-
trode surfaces and chamber interior three times with double-
distilled water. Dry by blotting gently with a KimWipe, and then
allow to air dry before storage.
• Average the background resistance measurements taken before
and after epithelial monolayer measurements. Make sure to
subtract the average background resistance from values recorded
for epithelial monolayers. From the corrected resistance values,
calculate the unit area resistance (see Note 22).
4 Notes
CHAPTER IX
Physiology
Production of the Current.—It is not at first sight obvious that the
lashing of flagella in chambers arranged as above described,
between an inhalant and an exhalant system of canals, will
necessarily produce a current passing inwards at the ostia and
outwards at the osculum. And the difficulty seems to be increased
when it is found[273] that the flagella in any one chamber do not
vibrate in concert, but that each keeps its own time. This, however, is
of less consequence than might seem to be the case. Two conditions
are essential to produce the observed results: (1) in order that the
water should escape at the mouth of the chamber there must be a
pressure within the chamber higher than that in the exhalant
passages; (2) in order that water may enter the chamber there must
be within it a pressure less than that in the inhalant passages. But
the pressure in the inhalant and exhalant passages is presumably
the same, at any rate before the current is started, therefore there
must be a difference of pressure within the chamber itself, and the
less pressure must be round the periphery. Such a distribution of
pressures would be set up if each flagellum caused a flow of water
directed away from its own cell and towards the centre of the
chamber; and this would be true whether the flagellum beats
synchronously with its fellows or not.
Canal systems of the second type show a double advance upon that
of the Ascons, namely, subdivision of the gastral cavity and much
greater length of the smooth walled exhalant passage. The
choanocytes have now a task more equal to their strength, and,
further, there is now a very great inequality between the total
sectional areas of the flagellated chambers and that of the oscular
tube.
It is manifest that the current is the bearer of the supply of food; but
it requires more care to discover (1) what is the nature of the food;
(2) by which of the cells bathed by the current the food is captured
and by which digested. The answer to the latter question has long
been sought by experimenters,[275] who supplied the living sponge
with finely powdered coloured matters, such as carmine, indigo,
charcoal, suspended in water. The results received conflicting
interpretations until it became recognised that it was essential to take
into account the length of time during which the sponge had been
fed before its tissues were subjected to microscopic examination.
Vosmaer and Pekelharing obtained the following facts: Spongilla
lacustris and Sycon ciliatum, when killed after feeding for from half
an hour to two hours with milk or carmine, contain these substances
in abundance in the bodies of the choanocytes and to a slight degree
in the deeper cells of the dermal tissue; after feeding for twenty-four
hours the proportions are reversed, and if a period of existence in
water uncharged with carmine intervenes between the long feed and
death then the chambers are completely free from carmine. These
are perhaps the most conclusive experiments yet described, and
they show that the choanocytes ingest solid particles and that the
amoeboid cells of the dermal layer receive the ingested matter from
them. In all probability it is fair to argue from these facts that solid
particles of matter suitable to form food for the sponge are similarly
dealt with by it and undergo digestion in the dermal cells.
The Hexactinellid curve (c) culminates on III., showing that the group
is characteristically deep water. That for Tetractinellida (d) reaches
its greatest height on II., i.e. between 51 and 200 fathoms. Even