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Advances in Experimental Medicine and Biology 972
Advances in Microbiology, Infectious Diseases and Public Health

Giovanni Rezza
Giuseppe Ippolito Editors

Emerging and
Re-emerging
Viral Infections
Advances in Microbiology, Infectious Diseases
and Public Health Volume 6
Advances in Experimental Medicine
and Biology
Advances in Microbiology, Infectious Diseases
and Public Health

Volume 972

Editorial Board
Irun R. Cohen, The Weizmann Institute of Science, Rehovot, Israel
N.S. Abel Lajtha, Kline Institute for Psychiatric Research, Orangeburg, NY, USA
John D. Lambris, University of Pennsylvania, Philadelphia, PA, USA
Rodolfo Paoletti, University of Milan, Milan, Italy

Subseries Editor
Gianfranco Donelli, Microbial Biofilm Laboratory, Fondazione Santa Lucia
IRCCS, Rome, Italy
The Advances in Microbiology, Infectious Diseases and Public Health Series
will provide microbiologists, hygienists, epidemiologists and infectious
diseases specialists with well-choosen contributed volumes containing
updated information in the areas of basic and applied microbiology involving
relevant issues for public health, including bacterial, fungal and parasitic
infections, zoonoses and anthropozoonoses, environmental and food micro-
biology. The increasing threat of the multidrug-resistant microorganisms and
the related host immune response, the new strategies for the treatment of
biofilm-based, acute and chronic microbial infections, as well as the devel-
opment of new vaccines and more efficacious antimicrobial drugs to prevent
and treat human and animal infections will be also reviewed in this series in
the light of the most recent achievements in these fields.Special attention will
be devoted to the fast diffusion worldwide of the new findings of the most
advanced translational researches carried out in the different fields of
microbiological sciences, with the aim to promote a prompt validation and
transfer at clinical level of the most promising experimental results. The book
series publishes review and original research contributions, short (data)
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tal Medicine and Biology 2015 Impact Factor: 1.953 Advances in Experi-
mental Medicine and Biology has been publishing exceptional works in the
field for over 30 years and is indexed in Medline, Scopus, EMBASE,
BIOSIS, Biological Abstracts, CSA, Biological Sciences and Living
Resources (ASFA-1), and Biological Sciences.

More information about this series at http://www.springer.com/series/13513


Giovanni Rezza • Giuseppe Ippolito
Editors

Emerging and
Re-emerging Viral
Infections
Advances in Microbiology, Infectious
Diseases and Public Health Volume 6
Editors
Giovanni Rezza Giuseppe Ippolito
Istituto Superiore di Sanità IRCCS IRCCS
Roma, Italy National Institute for Infectious
Diseases
Roma, Italy

ISSN 0065-2598 ISSN 2214-8019 (electronic)


Advances in Experimental Medicine and Biology
ISSN 2365-2675 ISSN 2365-2683 (electronic)
Advances in Microbiology, Infectious Diseases and Public Health
ISBN 978-3-319-52484-9 ISBN 978-3-319-52485-6 (eBook)
DOI 10.1007/978-3-319-52485-6

Library of Congress Control Number: 2016935504

# Springer International Publishing AG 2017


This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or
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Contents

Preface – Emerging Viruses: From Early Detection


to Intervention . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Giuseppe Ippolito and Giovanni Rezza
How to Tackle Natural Focal Infections: From Risk
Assessment to Vaccination Strategies . . . . . . . . . . . . . . . . . . . . . . 7
Luca Busani, Alexander E. Platonov, Onder Ergonul,
and Giovanni Rezza
Human–Animal Interface: The Case for Influenza
Interspecies Transmission . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17
Isabella Donatelli, Maria R. Castrucci, Maria A. De Marco,
Mauro Delogu, and Robert G. Webster
Bats and Emerging Infections: An Ecological and Virological
Puzzle . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35
Jordi Serra-Cobo and Marc López-Roig
The Middle East Respiratory Syndrome Coronavirus – A
Continuing Risk to Global Health Security . . . . . . . . . . . . . . . . . . 49
Esam I. Azhar, Simone Lanini, Giuseppe Ippolito,
and Alimuddin Zumla
Emerging Zika Virus Infection: A Rapidly Evolving Situation . . . . . 61
Licia Bordi, Tatjana Avsic-Zupanc, Eleonora Lalle,
Francesco Vairo, Maria Rosaria Capobianchi,
and Pedro Fernando da Costa Vasconcelos
Syrian Hamsters as a Small Animal Model for Emerging
Infectious Diseases: Advances in Immunologic Methods . . . . . . . . 87
Bryce M. Warner, David Safronetz, and Gary P. Kobinger
Enabling Rapid Response to the 2014–2016 Ebola Epidemic:
The Experience and the Results of the National Institute
for Infectious Diseases Lazzaro Spallanzani . . . . . . . . . . . . . . . . . 103
Emanuele Nicastri, Concetta Castilletti, Mirella Biava,
Francesco Maria Fusco, Nicola Petrosillo, Vincenzo Puro,
Francesco Nicola Lauria, Maria Rosaria Capobianchi,
Antonino Di Caro, and Giuseppe Ippolito

v
vi Contents

Prioritization of High Consequence Viruses to Improve


European Laboratory Preparedness for Cross-Border
Health Threats . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123
Carla Nisii, Roland Grunow, Andreas Brave, Giuseppe Ippolito,
Daniela Jacob, Pontus Jureen, Barbara Bartolini, Antonino Di Caro,
and the EMERGE Viral Pathogens Working Group
The Potential of Social Media and Internet-Based Data
in Preventing and Fighting Infectious Diseases: From Internet
to Twitter . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 131
Khaled Al-Surimi, Mohammed Khalifa, Salwa Bahkali,
Ashraf EL-Metwally, and Mowafa Househ
Erratum: Emerging Zika Virus Infection: A Rapidly
Evolving Situation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141
Licia Bordi, Tatjana Avsic-Zupanc, Eleonora Lalle,
Francesco Vairo, Maria Rosaria Capobianchi,
and Pedro Fernando da Costa Vasconcelos

Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 143
Adv Exp Med Biol - Advances in Microbiology, Infectious Diseases and Public Health (2017) 6: 1–5
DOI 10.1007/5584_2017_33
# Springer International Publishing Switzerland 2017
Published online: 1 April 2017

Preface – Emerging Viruses: From Early


Detection to Intervention

Giuseppe Ippolito and Giovanni Rezza

Keywords
Diagnostics • Emergence • Emerging infections • Quarantine • Vaccine

In the last decades, several viruses emerged, after we find several agents transmitted by Aedes spp.
cross-species passage from animal reservoirs and mosquitoes, from dengue to chikungunya and
then spreading in human populations; the Ebola Zika (McCloskey et al. 2014).
virus, two different coronaviruses causing the Vector-borne viruses are not the only
severe acute respiratory syndrome (SARS-CoV) emerging agent which represent a threat for
and the Middle-east respiratory syndrome human health, and other zoonotic viruses are
(MERS-CoV), and the Nipah virus, are increasingly impacting on the burden of disease
paradigmatic examples of biological agents at the global level (Morens and Fauci 2013). To
completely new for humans, with high epidemic this regard, zoonoses account for nearly
potential, but also prone to disappear in case two-thirds of human infectious diseases, in part
early detection and intervention are ensured due to the increasing anthropogenic pressures on
(Morse 1993; Fauci and Morens 2012). the environment. Leading drivers of infectious
Other viruses expanded their geographical disease emergence in humans from wildlife are
area of activity from the original ecological multiple and complex, and broad and novel
niche to new lands and continents, as recently approaches are required to tackle them. The
demonstrated by the large outbreaks of Zika or “One Health” approach, for example, considers
Crimean-Congo haemorrhagic fever in Spain, the human-animal-environment interface with a
and dengue in Madeira (Portugal). Several single perspective (IOM 2015). The aim is to
arboviruses represent paradigmatic examples of promote synergies among public health, informa-
microorganisms which found the conditions for tion and communication, human and animal
their spread in previously unaffected areas health, veterinary and medical approaches, envi-
inhabited by completely susceptible populations, ronmental and ecological sciences, mathematical
increasing their epidemic potential. In this group, modeling and geographic information systems,

G. Ippolito (*) G. Rezza


National Institute for Infectious Diseases Lazzaro Department of Infectious Diseases, Istituto Superiore di
Spallanzani, Rome, Italy Sanità, Rome, Italy
e-mail: giuseppe.ippolito@inmi.it e-mail: giovanni.rezza@iss.it

1
2 G. Ippolito and G. Rezza

anthropological and behavioral expertise (Zumla of the infection to naı̈ve areas are likely to suc-
et al. 2015). ceed when complemented by correct informa-
Emerging viruses represent an important chal- tion, lab evidence based decision making for
lenge for global public health, and prompt inter- keeping patients under isolation, high quality
vention is needed in order to put outbreaks under care and treatment of confirmed patients.
control (McCloskey et al. 2014). First of all, With mosquito-transmitted diseases, which
early diagnosis of the agent is extremely impor- recently caused several large outbreaks in many
tant to rapidly identify the viral threat and to start poor resource countries, prevention also play a
the intervention as soon as possible (Memish major role. A paradigmatic example is
et al. 2014). To this end, a syndromic approach represented by the spread of chikungunya and
and the use of an appropriate case-definition may Zika in Latin America and Caribbean, where
be useful to hypothesize the nature of the disease. dengue was already present. However, mosquito
However, as demonstrated with Ebola in the control activities may be successful in
large outbreak occurred in West Africa in 2014, controlling local outbreaks occurring in temper-
only a small proportion of cases had hemorrhagic ate areas but do not appear able to mitigate large
manifestations, thus relying on bleeding did not epidemics in tropical areas. For this reason, the
provide a valid clue to diagnosis. Laboratory availability of safe and effective vaccines is
diagnosis is more specific and represents the essential in order to keep virus circulation under
gold standard for the diagnosis of an emergent control.
virus. However, in certain contexts, it may be There are no vaccines available against most
difficult to perform relatively sophisticated tests emerging infections, and this may be explained
under adverse environmental conditions. More- by a series of factors. First, for their own nature,
over, the lack of protective equipment and high emerging infections have often epidemic patterns
security level laboratories is an obstacle to that minimize the feasibility of large efficacy
handling potentially infected samples. To over- trials, which are now considered the gold stan-
come this problem, mobile BSL4 labs have been dard for vaccine evaluation. In fact, the conduc-
extensively provided by the international com- tion of large studies is limited by the
munity to allow Ebola virus infection diagnosis unpredictability of large outbreaks where
during the recent outbreak of Ebola in West vaccines may be tested on large population
Africa. groups; secondly, for the same reason, vaccine
Response capacity, especially by resource demand may be difficult to assess; thirdly, lim-
poor countries, and rapid intervention in the con- ited resources are allocated to vaccine research
text of explosive outbreaks is key to mitigate or and development when economic return is not
control epidemic events (Anema et al. 2014). ensured.
With diseases like Ebola, that are transmitted For example, identifying the target
through direct contact with diseased persons, populations for vaccination campaigns is not an
dead bodies, or bodily fluids, and are amplified easy task. For Ebola, health care workers in high
by the family and the hospital setting or burial risk areas might be a target, as well as health
ceremonies, avoiding contact with physical professionals who intervene in case of outbreaks.
barriers is rather efficient and productive. Finally, ring vaccination of direct and indirect
Measures as the availability of a large number contacts of infected patients might be vaccinated
of hospital beds to keep infected patients away to reduce the risk of disease and transmission in
from the community, protective equipment and an affected area.
training of health care workers to avoid direct Vaccines against a few arboviral diseases,
contact with patient fluids, restriction of such as those against yellow fever and Japanese
movements to minimize the risk of introduction encephalitis, have been extensively used. In
Preface – Emerging Viruses: From Early Detection to Intervention 3

particular, the live attenuated vaccines against specific behaviour of different species. These
yellow fever, which was created in the 1930s, factors allow to assess the epidemiological risk
has contributed to the control of the disease both for humansand to plan preventive measures
in Africa and in South America. However, a (Serra-Cobo and López-Roig 2016).
vaccine against dengue, whose target is In Azhar et al. report, an overview of Middle
represented by the local communities in affected East Respiratory Syndrome Coronavirus
area of the world, has proven to be only partially (MERS-CoV) epidemiology and its clinical
effective, and vaccines against chikungunya and features is provided. The paper highlights the
Zika are still lacking. knowledge gaps and the epidemic risk potential
Nevertheless, making vaccines and effective for global spread of this emergent coronavirus
drugs to be used as prophylaxis in case of detec- (Azhar et al. 2016).
tion of early chains of transmission of emerging The current Zika virus large outbreak occur-
viruses, as it may happen with a mutated strain of ring in Pacific Ocean and the Americas, includ-
avian influenza (i.e., a “humanized” H5N1 or ing the critical aspect for a coordinated response,
H7N9 flu virus) would be very useful if is described by Bordi et al. Several aspects, such
complemented by effective molecular surveil- as the mode of transmission, the risks associated
lance (Hui and Zumla 2015; Marston et al. 2014). with pregnancy in infected mothers, the associa-
In this volume, we present a series of article tion of the virus with severe consequences,
on mechanisms and drivers of emergence of including fetal/newborn microcephaly and
novel virus infections in human population, Guillain-Barré Syndrome in adults, are discussed
trying to focus the attention on aspects which in the paper (Bordi et al. 2016).
have not frequently addressed before. Animal models are essential for the study of
For this special issue, the articles written by emerging infections, to improve disease knowl-
internationally renowned experts cover several edge and for developing therapeutic drugs.
areas of research. In the paper by Busani et al., Warner et al. describe the use of small animal
the application of the theory of focality of models for the study of infectious diseases, with
diseases to infectious disease is discussed, special focus on the Syrian golden hamsters
providing paradigmatic examples of viral emerged as an ideal animal model, due to their
diseases (Busani et al. 2016). The proposed low cost, small size, ease of handling, and ability
approach is represented by detailed mapping of to accurately reflect disease progression in
the areas of activity of biological agents causing humans. In the paper, valuable information to
natural focal diseases along with evidence-based researchers who are deciding whether to use
interventions, such as targeted vaccination. hamsters as an animal model is provided (Warner
In Castrucci review, the Human-animal inter- et al. 2016).
face is discussed, with a a speficic focus on The 2014–2015 Ebola virus outbreak in west-
influenza. The topic is particularly important, ern Africa illustrates the threat coming from
since “humanization” of avian viruses represents emerging infectious diseases and is perceived
a persistent threat to human health (Donatelli by the public as a preeminent global health prob-
et al. 2016). lem. Nicastri et al. present the activities and the
In the Serra-Cobo and López-Roig paper, the challenging issues encountered in terms of medi-
roles played by bats in emerging infections is cal management of the patients, preparedness
presented and discussed. Maintenance and response to the outbreaks, diagnostic and
mechanisms and transmission of bat viruses research challenges (Nicastri et al. 2016).
were analyzed, taking into account the phyloge- Highly infectious diseases can spread rapidly
netic history, coevolution processes, bat adapta- across borders through travel or trade, and inter-
tion to live in different environments, and national coordination is essential to a prompt and
4 G. Ippolito and G. Rezza

efficient response by bio-containment References


laboratories. A prioritization of high conse-
quence viruses is essential to improve European Al-Surimi K, Khalifa M, Bahkali S, El-Metwally A,
laboratory preparedness for cross-border health Househ M (2016) The potential of social media and
internet-based data in preventing and fighting infec-
threats. The strategy to identify priorities for a tious diseases: from internet to Twitter. Adv Exp Med
rational allocation of resources for research and Biol. doi: 10.1007/5584_2016_132. [Epub ahead of
surveillance has been the focus of a large body of print] PubMed PMID: 28004307
research in recent years. The activities and the Anema A, Kluberg S, Wilson K, Hogg RS, Khan K, Hay
SI (2014) Digital surveillance for enhanced detection
the strategy used by EMERGE, an European- and response to outbreaks. Lancet Infect Dis
wide consortium funded by the European Com- 14:1035–1037
mission, are described in the paper by Nisii Azhar EI, Lanini S, Ippolito G, Zumla A (2016) The
et al. (2016). middle east respiratory syndrome coronavirus - a
continuing risk to global health security. Adv Exp
New emerging technologies are useful for Med Biol. [Epub ahead of print] PubMed PMID:
detecting, tracking, reporting, forecasting, and 27966107
improving early warning systems and proper Bordi L, Avsic-Zupanc T, Lalle E, Vairo F, Rosaria
response. To this regard, Al-Surimi et al. Capobianchi M, da Costa Vasconcelos PF (2016)
Emerging Zika virus infection: a rapidly evolving
highlights and discuss the potential role of social situation. Adv Exp Med Biol. doi: 10.1007/
media in preventing and fighting infectious 5584_2016_187. [Epub ahead of print] Erratum in:
diseases, summarizing the advantages and Adv Exp Med Biol. 2017 Mar 03. PubMed PMID:
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Busani L, Platonov AE, Ergonul O, Rezza G (2017) How
data for public health surveillance, in order to to tackle natural focal infections: from risk assessment
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The papers published in this special issue PubMed PMID: 28213810
Donatelli I, Castrucci MR, De Marco MA, Delogu M,
present exciting, insightful observations on Webster RG (2016) Human-animal interface: the
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warfare between viruses and man. However, the Emerging viral diseases: confronting threats with new
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edge. Thus, our intention was not to conduct a Al Rabeeah AA, Al-Tawfiq JA (2014) Hajj: infectious
systematic collection of all emerging infections, disease surveillance and control. Lancet 383:2073–2082
but to address specific issues that may be impor- Morens DM, Fauci AS (2013) Emerging infectious
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Adv Exp Med Biol - Advances in Microbiology, Infectious Diseases and Public Health (2017) 6: 7–16
DOI 10.1007/5584_2016_199
# Springer International Publishing Switzerland 2017
Published online: 18 February 2017

How to Tackle Natural Focal Infections:


From Risk Assessment to Vaccination
Strategies

Luca Busani, Alexander E. Platonov, Onder Ergonul,


and Giovanni Rezza

Abstract
Natural focal diseases are caused by biological agents associated with
specific landscapes. The natural focus of such diseases is defined as any
natural ecosystem containing the pathogen’s population as an essential
component. In such context, the agent circulates independently on human
presence, and humans may become accidentally infected through contact
with vectors or reservoirs. Some viruses (i.e., tick-borne encephalitis and
Congo-Crimean hemorrhagic fever virus) are paradigmatic examples of
natural focal diseases. When environmental changes, increase of reser-
voir/vector populations, demographic pressure, and/or changes in human
behavior occur, increased risk of exposure to the pathogen may lead to
clusters of cases or even to larger outbreaks. Intervention is often not
highly cost-effective, thus only a few examples of large-scale or even
targeted vaccination campaigns are reported in the international literature.
To develop intervention models, risk assessment through disease mapping
is an essential component of the response against these neglected threats
and key to the design of prevention strategies, especially when effective
vaccines against the disease are available.

Keywords
Natural Focal Diseases • Viruses • TBE • CCHF • Vaccination

O. Ergonul
L. Busani Department of Infectious Diseases, Koç University,
Department of Veterinary and Food Safety, Istituto Istanbul, Turkey
Superiore di Sanità, Roma, Italy
G. Rezza (*)
A.E. Platonov Department of Infectious Diseases, Istituto Superiore di
Central Research Institute of Epidemiology, Moscow, Sanità, Viale Regina Elena, 299 Roma, Italy
Russia e-mail: giovanni.rezza@iss.it

7
8 L. Busani et al.

A “natural focus of an infectious disease” is a and the environment, which provides for the
concept deriving from the theory of focality of existence of the pathogen” (Korenberg 2010).
diseases, proposed by the Russian scientist Such process is a series of consecutive cycles of
Eugene Pavlovsky in 1939. According to this pathogen reservation (restriction) and spread
theory, some pathogens are associated with spe- (circulation), providing the process to be limited
cific landscapes, and the natural “focus” or in time and space by the presence of specific
“nidus” of an infectious disease is defined as conditions needed by the pathogen. Moreover,
“any natural ecosystem that contains the popula- the circulation of the pathogen in the natural
tion of a pathogen as an essential component” foci is independent on human presence, and
(Korenberg 2010). The determinant feature of human infection, with rare exceptions, is a
natural-focal diseases is that the pathogen “biological dead end” for the pathogen. The
circulates in nature independently from human interaction between pathogens and humans is an
presence. As a rule, humans beings become accidental event and does not have any coevolu-
infected when they get into the focus and have tionary consequence (WHO 2016). An outbreak
contact with the infectious vector or, in some directly connected with natural foci is actually
cases, with the reservoir host (Korenberg 2010). the sum of individual disease cases occurring in
To develop the concept of natural focality, different places independently on each other,
Pavlovsky, in his original theory, analysed tick- with infection often being acquired from one or
borne pathogens in Russia, and for such several sources not connected with other dis-
pathogens he stated that the focus of infection eased persons (Korenberg 2010). This concept
should have three critical elements: is important to distinguish zoonoses with natural
focality and human infections acquired from
1. The aetiological agent of the disease; domestic animals. Another difference between
2. vertebrate hosts playing different roles (infec- natural focal diseases and other zoonoses is the
tious and susceptible recipient hosts, relevance of the socio-ecosystem level in the
reservoirs); structure of the epidemic process, which may be
3. environmental factors enabling the circulation high for several zoonotic infections but usually
and persistence of the agent. does not play any role in case of zoonoses with
natural focality.
Starting from this original formulation related However, it should be taken into account that
to vector-borne diseases, the definition of natural biological and social factors, and increasingly
focality was applied also to non-vector-borne intensive human activities, can cause drastic
zoonoses, such as hemorrhagic fever with renal changes in the structure and functioning of para-
syndrome, Ebola (when restricted to its natural sitic systems, the frequency and forms of human
nїche), leptospirosis, and other infectious contact with natural foci, and even the pathway
diseases. Finally, natural focality for a large of pathogen transmission to humans.
group of sapronotic infections, whose agents This “basal” interpretation of the epidemic
live in soil or aquatic ecosystems, was also process in infections with natural focality
described and discussed. For some vector-borne remains unchanged. It should only be taken into
zoonoses, the concept of a focus (nidus) may be account that people themselves create conditions
implemented as well. Thus, the phenomenon of for their exposure, favouring the entrance of
natural focality is widespread, and includes many pathogens from natural ecosystems into their
natural-focal diseases with different types of immediate environment, and for their active
transmission. reproduction and amplification in this new envi-
The natural transmission of a pathogen, in the ronment. For example, epidemic outbreaks of
context of natural focality, should be considered hemorrhagic fever with renal syndrome, a typical
a “continuous interaction of the pathogen popu- zoonosis with natural focality, are usually
lation with the populations of its natural hosts associated with virus shedding by animal
How to Tackle Natural Focal Infections: From Risk Assessment to Vaccination Strategies 9

reservoirs (murine rodents) migrating to can be plotted, trying to identify the geographical
populated areas, where favourable conditions distribution of the natural foci of infection in a
for virus amplification are created when the given area. Therefore, medical geography has an
abundance of these animals reaches high values important task: evaluating the risk of epidemic
(Korenberg 2010). hazards of natural ecosystems and providing
In the past two decades, views on the diver- public health authorities with recommendations
sity, spread, and epidemic significance of necessary to prevent disease outbreaks and con-
infections with natural focality have changed duct epidemiological surveillance.
substantially all over the world. Some new
pathogens have been discovered, and periodic
epidemic manifestations of natural foci have
1 Eco-Epidemiology: How
become a matter of great concern. Moreover,
to Predict and Control
increasing human activity (e.g., intensive subur-
the Occurrence of Natural
ban construction around big cities, expansion and
Focal Infectious Diseases
growth of recreational pressure) have led to a
significant increase in contact between human
Current understanding about the global distribu-
populations and natural foci, creating favourable
tion of most infectious diseases is surprisingly
epidemiological conditions for the spread of
limited. In particular, the spatial distribution of
natural-focal diseases (Malkhazova et al. 2014).
the vast majority of natural focal diseases
The large outbreak of Ebola occurred in West
remains largely unknown and many questions
Africa from December 2013 to March 2016,
are still unsolved, mainly because of the poor
affecting three countries (Guinea, Liberia, and
knowledge of their local variations and of the
Sierra Leone), is an example of the epidemic
characteristics of the ecological niches that
potential of natural focal diseases if virus
allow the permanence of such diseases in their
properties (capacity of inter-human transmis-
natural environment. Due to their intrinsic
sion), environmental factors, and social
features, the transmission of focal diseases to
conditions concur to increase the force of infec-
humans is highly heterogeneous in space and
tion, leading to large-scale virus circulation
time. At the micro-epidemiological scale, numer-
throughout human communities. At the end of
ous factors influence the transmission dynamics
the outbreak, more than 28,000 cases and 11,000
of the diseases in endemic foci, and variations in
deaths were reported (WHO http://www.who.int/
the distribution of these factors, even in a small
csr/disease/ebola/en/).
area, can result in spatially heterogeneous trans-
Natural-focal disease prevention is one of the
mission and appearance of disease hotspots,
most challenging public health problems. Agents
where transmission intensity is higher than in
and vectors of these diseases are part of natural
the surrounding areas.
landscapes and the spread of these diseases,
There are several reasons for mapping the
which may represent a serious hazard for people,
geographical distribution of infectious diseases.
is determined by natural factors. Such factors can
Maps of disease distribution and intensity allow
be identified and described in the affected area, in
an immediate visualization of the extent and
order to identify the “hot spots” of the disease,
magnitude of the public health problem. These
which are the most suitable places for the agents
maps can also document the background level of
and vectors. As proxy of the landscape features,
the disease in order to monitor its trend and to
also historical data on biocenosis, health records
evaluate interventions. Another reason is that
of humans and other vertebrate hosts (domestic
maps may also provide information on the
and wild animals) can be used. With such infor-
factors that favour the emergence of infectious
mation, predictions on the probability that a
diseases.
given biological agent is present in a specific
area are possible. Moreover, this information
10 L. Busani et al.

Hereby we present some innovative unsampled areas, predict invasive potential in


approaches to disease mapping which provide other regions/continents, predict likely distribu-
useful information and predictions. tional change with changing land use, predict
likely distributional change with changing
climates, and build scenarios for understanding
1.1 Ecological Niche Modelling and characterizing unknown disease behaviour.
Hence, ecological niche modelling offers a pow-
A wide range of approaches has been developed erful tool for characterizing ecologic and geo-
for empirical modelling of species and disease graphic distributions of species across real-
distributions, making use of data on point world landscapes (Peterson 2008a, b).
observations of disease occurrence, with the
objective of identifying the fundamental niche
of the target organism (Hay et al. 2013). Some 1.2 The Boosted Regression Trees
of these approaches allow to account for environ- Method
mental covariates, data on presence of pathogens
and natural hosts, landscapes, and climate To map the occurrence of a given disease, the
information. boosted regression trees method (Elith et al.
The concept of ecologic niche was proposed 2008; De’ath 2007) is one of the most performing
by Joseph Grinnell (1917) who was the first to methods; it is flexible in being able to accommo-
explore connections between ecological niches date different types of predictor variables
and geographic distributions of species. (e.g. continuous or categorical data) and easy to
According to his proposal, the ecologic niche of understand, implement and uses reliable. The
a species is the set of conditions under which maps generated with such approach are simple
species populations may be maintained without to interpret and include a ranked list of environ-
immigration of individuals from other areas. The mental predictors.
idea behind niche modelling is that known Another approach that has recently been more
occurrences of species across landscapes can be widely applied in infectious disease mapping is
related to raster geographic information system the model-based geostatistics (Diggle and
coverages summarizing environmental Ribeiro 2010) that has important advantages
variations across those landscapes, to estimate when compared to the boosted regression trees
the ecological niche of the species (Peterson method: (i) it deals explicitly with the spatial
et al. 2002). Such a modelling approach can be (and with extension temporal) autocorrelation
used to identify potential distributional areas for of disease data. This is still widely ignored in
species on any landscape, which may include occurrence mapping; (ii) it offers a much more
unsampled or unstudied portions of the native robust parameterization of factors that can affect
landscape (López-Cárdenas et al. 2005), areas disease endemicity (such as age of the
of actual or potential invasion by species with individuals sampled, the diagnostic technique
expanding ranges (Townsend Peterson and Kluza used, the influence of covariates etc.); (iii)
2003), or changing potential distributional areas outputs can also show the full uncertainty of the
as a consequence of change (e.g., land use prediction in all parts of the predicted maps by
change or climate change) (Escobar et al. 2015). fitting the models using Bayesian inference.
Ecological niche modelling, may be used to
characterize distributional areas of species in
complex, linked geographic and ecologic spaces. 1.3 Macroecology
It permits researchers to characterize ecological
needs of species, interpolate between sampling The “macroecology” appears to provide a new
points to predict full distributions of species, perspective in identifying drivers of infectious
predict species distribution into broadly disease patterns and impacts at the broadest
How to Tackle Natural Focal Infections: From Risk Assessment to Vaccination Strategies 11

scales of organisation. Macroecology animals and wildlife, and the few ecological
investigates patterns and processes at broad spa- studies on diseases with natural focality
tial, temporal and taxonomic scales, expanding (Malkhazova et al. 2014).
scientific understanding of global infectious dis- The knowledge of human distribution in many
ease ecology. In particular, it could help areas of the World remains also surprisingly
providing new insights about scaling properties poor. For many low income countries of the
across all living taxa, and new strategies for World, spatially detailed, contemporary census
mapping pathogen biodiversity and infection data do not exist. This is especially true for much
risk. Macroecology seems a useful framework of Africa, where currently available census data
to more accurately predict global patterns of are over a decade old, and at administrative
infectious disease distribution and emergence boundary levels just below national-level (Hay
(Stephens et al. 2016). Research in the relatively et al. 2005; Tatem et al. 2008). This information
new discipline of macroecology covers impor- is of significant importance for deriving
tant findings and advances in computational and populations at risk and infection movement
statistical methods explaining how estimates.
macroecological approaches can inform human Another key factor that may affect the distri-
health and conservation initiatives. The bution and the prediction of natural focal
advanced computational techniques are applied diseases, together with a large number of other
to enormous data sets to look for patterns; in the human and animal diseases, is climate change.
case of disease ecology, this kind of analysis can Species’ response to climate change are variable
help scientists understand relationships among and diverse, yet our understanding of how differ-
parasites, hosts and their environments. ent responses (e.g. physiological, behavioural,
Indeed, the development of the principles and demographic) relate and how they affect relevant
methods of synthesizing information from differ- population parameters (e.g. population persis-
ent sources, including geography, to obtain new tence) is lacking. Much of the research on
knowledge about the spatial distribution patterns responses to climate change does not consider
of natural-focal diseases using new approaches is how population size, population growth rate, or
a research interest. The scientific and methodo- extinction risk varies as a function of climate;
logical basis of disease mapping, using informa- consequently, the mechanisms causing climate-
tion on landscape and environment, induced population changes are still poorly
mathematical methods, and multivariable analy- understood (van de Pol et al. 2010). Such lack
sis, is well developed and under continuous of knowledge impacts on the capability to make
improvement; however, practical experience are consistent predictions of the population dynam-
extremely limited in mapping diseases at a ics of both hosts and related pathogens.
broader level (nation, area, continent).
The ability to map a disease stems largely
from the type and quality of data that are avail- 2 Natural Focal Diseases
able for mapping. The accuracy of maps is then Mapping and Control: Two
largely determined by the abundance, spatial rep- Paradigmatic Examples
resentativeness and heterogeneity of those data
(Hay et al. 2013). Detection of the hotspots of natural focal
Differences in quality and incompleteness of diseases through the different mapping
initial information make it difficult to obtain a approaches is a key action to better target control
complete picture of the distribution of natural- efforts and to reduce/stop infection transmission
focal diseases within a territory. In particular, in those areas where transmission intensity is
details on disease/pathogen presence or absence higher for several reasons. The identification of
in a given area is limited, due to the limitation of areas and human populations at risk is essential
the surveillance activity in humans, domestic for better address vaccination campaigns and
12 L. Busani et al.

other interventions. However, only few natural In mammal hosts, the prevalence of infection
focal diseases have been studied in detail is poorly investigated, especially in wildlife.
mapping their foci, and vaccines are available Domestic ruminants play a crucial role in the
for few of them. Hereby we report available life cycle of the vector ticks and the transmission
information for two important natural focal and amplification of the virus. In most livestock
viral diseases. species viremia can lasts up to 14 days, thus
immune response starts, and the antibody preva-
lence in those animals is a good indicator for the
2.1 Crimean-Congo Hemorrhagic presence of CCHFV in a region. Recent studies
Fever: A Mapping Exercise conducted in different regions of Bulgaria and
Turkey showed an overall prevalence in domes-
Crimean-Congo hemorrhagic fever (CCHF) is a tic ruminants between 26 and 57%, but in some
tick borne disease characterized by fever and areas the prevalence was up to 90% (Mertens
hemorrhagic manifestations, with fatality rates et al. 2016). The potential usefulness of small
up to 30%. The disease was initially described ruminants as indicator animals to determine the
by Russian scientists in the ‘40s, while the virus presence or absence of CCHFV in a given region
was isolated the first time in the Democratic is also highlighted by Schuster et al. (2016), who
Republic of Congo some years later. CCHF pointed out also the limited knowledge about the
virus (CCHFV) circulation has been reported mechanisms governing the dynamics of CCHFV
throughout broad regions of Africa, Europe, the circulation in a suitable habitat and the role of the
Middle East, and Asia, with a geographic distri- various animals. Such circulation is linked
bution overlapping that of the Hyalomma tick, variables like age of the animals, with
the main vectors of CCHFV. CCHFV is one of dimostration of increasing antibody prevalence
the most geographically widespread tick-borne by increasing age of the tested animal population
pathogens of medical importance and may spread (Wilson et al. 1990; Barthel et al. 2014) hus-
to new areas if globalization and climate changes bandry conditions, usage of repellents, host-
create new opportunities for virus introduction preferences of the ticks and susceptibility of ani-
and amplification in suitable ecological niches mal species and breeds for CCHFV.
(Hewson 2007) (Papa et al. 2015). Large ungulates and livestock are usually
CCHF is considered a disease with natural asymptomatic and only active testing can show
focality, since the CCHFV is maintained in infection in these species. Because the lack of
active foci through a complex cycle that involves symptoms in animals and the short life-cycle of
ixodid ticks, mainly of the genus Hyalomma Hyalomma ticks, without active virological and
(the role in nature of other tick species in the serological surveillance in animals and ticks it is
natural transmission or maintenance of CCHFV unlikely to detect infection in animals earlier
is not clearly demonstrated) and reservoir hosts than in humans. Thus, the detection of human
(e.g. wild and domestic ungulates, domestic live- cases is often the first sign of CCHFV circulation
stock), on which adult ticks feed. Also other in an area.
mammals (rodents, pets) and birds can play a Mapping of the human cases is a way to rep-
role in the spread and maintenance of the virus resent the CCHF distribution. The World Health
transmission cycle. Organization (WHO) produced maps of the dis-
Little is known about the infection rates in ease at global scale, (http://www.who.int/csr/dis
both vectors and hosts in nature. In Hyalomma ease/crimean_congoHF/Global_CCHFRisk_
ticks, prevalence of infection is estimated to be 20080918.png?ua¼1), but this map represents
about 5%, but large geographical variability merely the reported occurrence of human disease
exists, due to local environmental conditions, rather than the distribution of the virus. This is
and to presence and abundance of the different due to the characteristic of the surveillance
types of hosts. (capacity to detect human cases in different
How to Tackle Natural Focal Infections: From Risk Assessment to Vaccination Strategies 13

countries/areas, underreporting, underdiagnosis); carried out due to the costs and the difficulties
the disease (a variable but relevant proportion of to establish reliable surveillance activity in
cases are subclinical, and this proportion may animals, especially in wildlife. Serological
vary in different geographical areas); specific surveys in livestock have been conducted in dif-
local conditions, like in Spain, where virus circu- ferent countries, providing snapshots of the cir-
lation was detected in ticks since 2010, but no culation of the virus in domestic animals (Adam
human cases were observed until the summer of et al. 2013; Lotfollahzadeh et al. 2011).
2016 (Estrada-Peña et al. 2012; Garcı́a Rada Surveys in ticks have also been carried out to
2016). identify areas with potential virus circulation.
A new perspective on the use of occurrence Recent experience of systematic tick surveillance
data, which was firstly developed for dengue by demonstrated the recent colonization of the con-
Bhatt et al. (2013), has been then applied to tinental France by H. marginatum; this region
CCHF by Messina et al. (2015). This approach was considered free from the tick (Vial et al.
is based on the creation of a large database by 2016).
assembling contemporary data on CCHF occur- In Europe, ticks are the most important
rence together with geographical location and a vectors of human and animal infectious diseases,
suite of environmental covariates. Such data and transmit more pathogens than any other
have been collected from many different sources arthropod (Jongejan and Uilenberg 2004;
of information, including the reporting of official Colwell et al. 2011). Monitoring of ticks requires
surveillance systems, the scientific and technical integrated approach, with expertise in environ-
literature and informal online resources. New mental science and entomology as a complement
modelling approaches are then applied to the to the human and animal health competencies.
large dataset to maximise the predictive power
of occurrence data. As a result, high resolution
spatial map of the probability of occurrence of 2.2 A Vaccine for CCHF: Give
human CCHF infection can be derived at global Prevention a Chance
level (Messina et al. 2015).
An example of successful modelling approach Initial attempts to develop CCHF vaccines goes
is the prediction of CCHF expansion in Western back to the 1960s, when Soviet scientists
Palearctic made by Estrada-Peña et al. They advocated the immunization of local populations
developed a dynamic model for CCHFV trans- in endemic areas. In 1974, the Soviet vaccine
mission in western Palearctic that considered the was licensed in Bulgaria. This inactivated virus
tick vector, Hyalomma marginatum and the vaccine is the currently only available CCHFV
effects of variations in temperature and water vaccine, however its clinical efficacy was not
vapour on hte tick survival (Estrada-Peña et al. clearly demonstrated (Mousavi-Jazi et al. 2012).
2013). The main outcome was that increase of More modern approaches, such as DNA
the temperature is compatible with the spread of vaccines, recombinant viral protein-based
CCHFV in the western Palearctic, because vaccines, and virus-like particle vaccines, are
expansion of the habitat suitable for tick vectors. under development. The lack of suitable animal
According to this scenario, increased virus circu- models in the past has hampered the develop-
lation would happen in sites where high tick ment of new, preventive, and therapeutic
populations may already exist. This scenario measures. In a recent study, IFNAR-/- mice was
was confirmed by the occurrence of a human found to be highly susceptible to the Turkey-
case in Spain in 2016 (Garcı́a Rada 2016). Kelkit06 strain of CCHFV. Immunization with
Combination of surveillance in humans, host the cell culture based vaccine elicited a signifi-
animals, and vectors is much more informative cant level of protection against high dose chal-
of the distribution of the virus and the areas at lenge (1000 PPFU) with a homologous CCHFV
risk of human exposure; however, it is rarely in IFNAR-/- mice (Canakoglu et al. 2015). The
14 L. Busani et al.

Bulgarian vaccine was used in CCHFV-endemic human exposure to infected ticks. In addition,
areas of the country for military personnel and however, the establishment of new natural foci
medical and agricultural workers over 16 years of TBE virus circulation has been described in
of age. None of the vaccinated military personnel areas previously considered free of TBE. In
has contracted CCHF, and none of the vaccinated Europe, Austria had the highest recorded mor-
laboratory personnel working with CCHFV bidity for TBE, with several hundred
became infected even after occasional exposures hospitalized patients per year and several deaths
by needle (Keshtkar-Jahromi et al. 2011). How- (Kunz 2003). A vaccine against TBE became
ever, detailed information on vaccination commercially available in 1976 and was
strategies adopted to reduced the burden of dis- administered to those at higher risk (e.g., people
ease in endemic foci and their possible outcome handling the infectious virus in the laboratory
are not available. The availability of other effec- and professional people working in forests in
tive and safe vaccines would represent a great highly endemic regions). Following the evidence
opportunity and needs to be considered in pre- of a limited impact of vaccination of at risk
paredness plans and control strategies, along groups only, mass vaccination campaign
with public information and behavioral organized by the Austrian Health authorities
prevention. began in 1981. The vaccination coverage of the
Austrian population increased from 6% in 1980
to 82% in 2013 and has exceeded 90% in some of
2.3 Tick Borne Encephalitis: Vaccine the high-risk areas. The increasing vaccination
Use to Control a Natural Focal coverage led to a steady decline in the number of
Disease TBE cases, that are ten times less than the 1976,
in addition, between 2000 and 2011, an estimate
Tick-borne diseases (TBDs) are among the most of 4000 hospitalized TBE cases were prevented
rapidly expanding infections worldwide. Many by vaccination (Heinz and Kunz 2004; Heinz
new human tick-borne pathogens are discovered et al. 2013). These results have been achieved
and several novel TBDs are recognized. Increas- thanks to the high awareness among the Austrian
ing burden of TBDs shows that current available population and the large use of an effective and
public health interventions and approaches are well-tolerated vaccine (Kunz 2002). However, it
not effective enough. Vaccination could be a could be challenging to maintain a high vaccina-
highly cost-effective intervention for preventing tion coverage in the future. Moreover,
TBDs (Šmit and Postma 2016). Among TBDs for recommendations to people visiting affected
which vaccines are currently available, tick- areas should be delivered, since pathogens and
borne encephalitis (TBE) is one of the most vectors are still there.
widespread in Europe. TBE can affect the central
nervous system, which may result in long-term/
permanent neurological sequelae or even death 3 Conclusions
(Dumpis et al. 1999). At the European level, TBE
presents an increasing public health concern with The importance of natural focal diseases has
vaccination against TBE less widely used than been largely neglected for a long time. However,
possible to reduce the disease burden (Šmit and the expansion of foci characterized by intense
Postma 2016). TBE incidence shows strong viral activity, even in previously free areas, has
annual variations as well as long fluctuations raised the attention on this threat. Viral diseases
over time in affected countries, and an overall like CCHF and TBE, initially restricted into
upsurge has been reported in certain parts of small geographical niches, have now an impor-
Europe. These changes have been related to cli- tant impact on human health in several areas of
matic, ecological, environmental and socioeco- the world. In some cases, although it may appear
nomic factors that can lead to an increased risk of paradoxical, mass vaccination campaigns have
How to Tackle Natural Focal Infections: From Risk Assessment to Vaccination Strategies 15

been successfully used to prevent and control western Palearctic. J Appl Microbiol 114:278–286.
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Adv Exp Med Biol - Advances in Microbiology, Infectious Diseases and Public Health (2017) 6: 17–33
DOI 10.1007/5584_2016_136
# Springer International Publishing Switzerland 2016
Published online: 28 September 2016

Human–Animal Interface: The Case


for Influenza Interspecies Transmission

Isabella Donatelli, Maria R. Castrucci, Maria A. De Marco,


Mauro Delogu, and Robert G. Webster

Abstract
Since the 1990s, the threat of influenza viruses to veterinary and human
public health has increased. This coincides with the larger global
populations of poultry, pigs, and people and with changing ecological
factors. These factors include the redistribution of the human population
to cities, rapid mass transportation of people and infectious agents,
increased global land use, climate change, and possible changes in viral
ecology that perpetuate highly pathogenic influenza viruses in the aquatic
bird reservoir. The emergence of H5N1, H7N9, and H9N2 subtypes of
influenza A virus and the increased genetic exchange among influenza
viruses in wild aquatic birds, domestic poultry, swine, and humans pose a
continuing threat to humanity. Here we consider the fundamental and
practical knowledge of influenza A viruses at the human–animal
interfaces to facilitate the development of novel control strategies and
modified agricultural practices that will reduce or prevent interspecies
transmission.

Keywords
Avian influenza • H5N1 • H7N9 • Zoonosis

I. Donatelli (*) and M.R. Castrucci M. Delogu


Department of Infectious, Parasitic and Immune- Wildlife and exotics animal service (SeFSE), Department
Mediated Diseases, Istituto Superiore di Sanità, of Veterinary Medical Sciences, University of Bologna,
Rome, Italy Ozzano Emilia, Bologna, Italy
e-mail: isabella.donatelli@iss.it; e-mail: mauro.delogu@unibo.it
mariarita.castrucci@iss.it
R.G. Webster
M.A. De Marco Division of Virology, Department of Infectious Diseases,
Istituto Superiore per la Protezione e la Ricerca St. Jude Children’s Research Hospital, Memphis,
Ambientale (ISPRA), Ozzano Emilia, Bologna, Italy TN, USA
e-mail: mariaalessandra.demarco@isprambiente.it e-mail: robert.webster@stjude.org

17
18 I. Donatelli et al.

1 Introduction influenza virus in 2009 that spread globally to


humans and the H5N1 and H7N9 influenza
Influenza A viruses are of major concern to both viruses that continue to evolve and spread.
veterinary and human public health because they Although neither the H5N1 nor the H7N9 viruses
continue to emerge and cause high mortality in have transmitted consistently among humans, the
domestic poultry and represent an ongoing threat pandemic potential of these viruses cannot be
to human health. With the recognition that overemphasized. Our challenge is to use our
aquatic birds are the major reservoir of influenza fundamental knowledge of influenza A viruses
viruses that sporadically transmit to domestic to prevent and/or control the emergence of influ-
poultry, swine, and humans, there is acceptance enza viruses at the aquatic bird–domestic bird–
of the “one world” concept of influenza (Jernigan mammalian interface.
and Cox 2013). When influenza A viruses spread
from the aquatic bird reservoir to domestic poul-
try, pigs, and people, they can evolve into viruses 2 The Viruses
that cause mild or catastrophic diseases. For
influenza viruses to spread from the aquatic bird Influenza viruses are enveloped, negative-sense,
reservoir to humans, they must evolve from single-stranded RNA viruses of the family
intestinal tropism in wild aquatic birds with a Orthomyxoviridae, and they exist as 3 different
body temperature of 42  C to respiratory tract types: A, B, and C. Influenza A and B viruses are
tropism in humans with a body temperature of associated with seasonal epidemics in humans,
37  C. Additionally, the virus must change its and influenza C viruses generally cause sporadic
receptor specificity on the hemagglutinin infections. Only influenza A viruses are found in
(HA) from a binding preference for sialic acid a number of mammalian and bird species
(SA)-α2,3 in wild birds to SA-α2,6 in humans (Wright et al. 2007; Webster et al. 1992), and
(Klenk et al. 2013). Therefore, multiple genetic they are further classified into subtypes based on
changes are required. The RNA genome of influ- the antigenic properties of their spike-like sur-
enza has a high mutation rate, no proofreading face glycoproteins, HA and neuraminidase (NA).
mechanism, and is segmented, which enables the At present, 18 HA subtypes (H1–H18) and
virus to be highly variable, continually acquire 11 NA subtypes (N1–N11) have been identified.
mutations, and frequently reassort. Agricultural Each virus contains 1 HA and 1 NA subtype, and
practices that inadvertently facilitate the most of the influenza A subtypes can be found in
exchange of influenza A viruses at the wild numerous possible combinations in aquatic bird
bird–domestic bird interface and at the domestic populations, except H17, H18, N10, and N11,
bird–mammalian interface have been adopted as which have been found only in bats (Tong
the need to provide additional animal protein to et al. 2012, 2013). In particular, wild waterfowl
an increasing human population has grown. are considered the main natural reservoir for
Here we consider our basic knowledge of the influenza A viruses; thus, they play a central
properties of influenza A viruses that permit role in influenza A virus ecology (Fig. 1). Con-
them to be so variable and the molecular versely, only a few influenza subtypes have
determinants of host range and pathogenicity become established in mammals, and H1, H2,
involved in the genesis of pandemic influenza and H3 are the only ones that have caused epi-
viruses of domestic poultry, pigs, and humans. demic and pandemic influenza in humans.
Since the mid-1990s, the number of influenza The genome of influenza A virus is approxi-
threats to both veterinary and human public mately 13.6 kb and consists of 8 RNA segments
health has increased, including the genesis of that encode at least 10 proteins, though a few other
triple-reassortant viruses that contain gene proteins have been recently described with as-yet
segments from wild aquatic birds, swine, and unknown functions (Palese and Shaw 2007;
humans. These include a pandemic H1N1 Medina and Garcia-Sastre 2011). Viral particles
Human–Animal Interface: The Case for Influenza Interspecies Transmission 19

Poultry

Dogs

Pigs
Horses

Aquatic birds

Aquatic mammals Cats

Humans

Fig. 1 Schematic illustration of influenza A virus cross- A viruses. The boxes indicate the species most likely
species transmission. Solid black lines indicate inter- involved in the emergence of zoonotic viruses with pan-
species transmission events. The circle includes the wild demic potential. Influenza viruses have been isolated from
aquatic birds that are the natural reservoir of most influenza bats but their role in interspecies transmission is not known

possess a host cell–derived lipid envelope, which Recurrent annual influenza epidemics in humans
contains transmembrane glycoproteins HA and are the consequence of this gradual, progressive
NA and matrix proteins (M1 and M2) and antigenic variation. Antigenic shift involves
surrounds the 8 ribonucleoprotein (RNP) major antigenic changes by introducing a novel
complexes. Each RNP complex contains a single HA and/or NA subtype into the immunologically
RNA segment encapsulated by the nucleoprotein naı̈ve human population, which leads to a pan-
(NP) and the 3 polymerase proteins (PB1, PB2, demic. This event is caused by reassortment,
and PA) (Arranz et al. 2012; Noda et al. 2006). typically between human and avian viruses in
HA, which is responsible for virus attachment to an intermediate host or by direct transmission
the host cell, and NA, which assists virus matura- of avian or swine influenza viruses to humans
tion and release by acting as a sialidase, are the (Medina and Garcia-Sastre 2011; Horimoto and
major targets of the humoral immune response Kawaoka 2005) (Fig. 1).
(Wright et al. 2007).
Influenza A viruses are continuously
evolving, and 2 key mechanisms contribute to 3 Molecular Determinants
their variability: antigenic drift and antigenic of Host-Range Restriction
shift. Antigenic drift is the accumulation of and Pathogenesis
mutations resulting from the infidelity of the
virus-encoded polymerase; thus, genetic variants Influenza A viruses display host-range specific-
with selective advantages to escape the host’s ity; however, viruses from the wild bird reservoir
immune response result (Ferguson et al. 2003). sporadically infect humans. For this to occur,
20 I. Donatelli et al.

reassortment events or evolutionary adaptation Specific amino acid residues at the receptor-
of viral molecular determinants in an intermedi- binding pocket of the HA mediate this apparent
ate host are needed for the virus to acquire host preference, and as few as 1 amino acid
mutations that allow its transmission to humans. mutation can significantly change receptor-
If this happens, zoonotic diseases can occur binding specificity and influence virulence. In
through direct contact with infected animals, as particular, amino acid changes of glutamine-to-
frequently described for H5, H7, and H9 viruses leucine at position 226 (Q226L) and glycine-to-
(Horimoto and Kawaoka 2005; Kuiken serine at position 228 (G228S) affect these traits
et al. 2006). Nonetheless, zoonotic influenza in the H2 and H3 virus subtypes, and changes of
viruses usually cause self-limiting illness in glutamic acid–to–aspartic acid at position
humans, and additional mutations are required 190 (E190D) and aspartic acid–to-glycine at
for them to become transmissible between position 225 (D225G) change the receptor-
mammals via respiratory droplets (Neumann binding affinity of the H1 virus subtype from
and Kawaoka 2015; de Graaf and Fouchier avian-to-human receptors (Rogers and Paulson
2014). Although it is a rare event, when this 1983; Matrosovich et al. 2000; Glaser
happens, worldwide spread and introduction of et al. 2005). Moreover, the distribution of the
a novel virus into the naı̈ve human population receptor type also varies by tissue location,
will cause a pandemic. Major determinants in the including upper versus lower respiratory tract,
host-range restriction and pathogenicity of these cell type, and species. In humans, SA-α2,3 is
viruses have been identified and are described found on certain alveolar cells, and the D225G
below, though additional studies are needed to substitution in HA of influenza H1N1pdm09
fully understand all of the adaptive mutations virus, which was observed in severe and fatal
that contribute to the transmission and establish- cases, enables the infection of ciliated bronchial
ment of new influenza virus lineages. cells in the lower respiratory tract by this virus
and by viral strains of avian origin (Shinya
et al. 2006; Yamada et al. 2006; Kilander
3.1 Hemagglutinin and Receptor- et al. 2010; Chutinimitkul et al. 2010). Neverthe-
Binding Specificity less, the SA-α2,6 receptor–binding preference is
considered essential for an influenza virus to
The viral HA is most likely the major host- infect and spread easily among humans; thus,
restriction factor that limits infection and inter- this preference limits avian viruses from trans-
species transmission because the cell receptor– mitting from birds to humans. Recent H5N1
binding requirements of the protein are deter- avian isolates from Egypt also bind SA-α2,6,
mined by the sialyl sugar structures on and the appearance of this sublineage in the
glycoproteins or glycolipids, which are on the local bird population has been correlated with
cell surface and differ across species (Klenk an increase in the bird-to-human transmission
et al. 2013; Imai and Kawaoka 2012; de Graaf efficiency, and thus with an increase in human
and Fouchier 2014). The most common form of H5N1 virus infections (Watanabe et al. 2011).
SA is the N-acetylneuraminic acid with an α2,3 Moreover, the H7N9 viruses that emerged in
linkage or an α2,6 linkage to galactose, herein China in 2013 possess the avian-type residue at
reported as SA-α2,3 and SA-α2,6, respectively. position 228, but the human virus–type Q226L
Human influenza A viruses preferentially recog- substitution, which confers a dual avian/human
nize SA-α2,6, which predominates on ciliated virus receptor–binding specificity (Gao
epithelial cells that line the upper respiratory et al. 2013; Shi et al. 2013). Although this most
tract. Most avian influenza A viruses preferen- likely explains the efficient transmission of these
tially recognize SA-α2,3, which predominates on viruses through direct contact, which has been
epithelial cells in the intestine and respiratory seen in the ferret and guinea pig models, these
tracts of wild birds and domestic birds. viruses still require additional adaptive mutations
Human–Animal Interface: The Case for Influenza Interspecies Transmission 21

for sustained airborne transmission between subsequently releases viral RNP complexes into
mammals (Watanabe et al. 2013, Zhu the cytoplasm. To that end, mature HA must be
et al. 2013; Belser et al. 2013; Zhang cleaved into 2 subunits, HA1 and HA2, by tissue-
et al. 2013; Richard et al. 2013). specific proteases (Klenk and Garten 1994). The
Recent evidence shows that the acquisition of cleavage site of the HA of human seasonal influ-
human-type receptor–binding specificity by enza A viruses is composed of a single arginine
avian viruses requires compensatory mutations and trypsin-like proteases that are produced by
in the stem region of HA to guarantee HA stabil- respiratory cells to recognize and cleave this
ity and the optimal pH for fusion and thus deter- motif. Most avian viruses also possess 1–2
mine virus transmissibility (Imai et al. 2012; basic amino acids at the cleavage site, and virus
Herfst et al. 2012). Importantly, amino acid replication is restricted to the intestinal and respi-
substitutions that lower the pH threshold for ratory tracts, thus causing mild or subclinical
fusion may increase the replication of infection in poultry. For this reason, these viruses
A/Vietnam/1203/2004 (H5N1) in the upper are referred to as “low-pathogenic” avian influ-
respiratory tract of ferrets and play a role in enza viruses. In contrast, the HAs of highly path-
airborne transmission between mammals but ogenic avian influenza viruses (HPAIVs) of H5
only in the presence of an appropriate human- and H7 subtypes that emerge in gallinaceous
type receptor–binding specificity (Zaraket poultry contain a polybasic cleavage-site motif
et al. 2013). More than 70 mutations in H1, H2, that can be cleaved by ubiquitous proteases,
H3, H5, and H7 HAs that affect this phenomenon thereby causing severe systemic infections and
have been described, which highlights how com- death in those species (Horimoto et al. 1994).
plex these processes can be (Russell 2014). Although HA cleavability represents a major vir-
HA glycosylation also affects a variety of ulence determinant of avian influenza viruses, its
biological properties, including receptor-binding role in mammals is still unclear, as none of the
specificity. In particular, the loss of a glycosyla- human viruses possess this polybasic motif.
tion site at position 158–160 in the HA of H5N1 Although HA binds SA-containing receptors
facilitates virus binding to the human-type recep- on target cells to initiate virus infection, NA
tor (Wang et al. 2010). This site is crucial for facilitates the release of virus particles by cleav-
H5N1 virus virulence in mice and for airborne ing the SA residues from the cell membrane.
transmission between mammals (Imai Thus, a functional balance between the
et al. 2012; Herfst et al. 2012; Gao et al. 2009). HA-mediated receptor binding and fusion and
Moreover, Neumann et al. (2012) recently the NA-mediated sialidase activity is required
reported that H5N1 viruses isolated from humans for efficient virus replication (Baum and Paulson
in Egypt lack this glycosylation site, which may 1991; Castrucci and Kawaoka 1993). In-frame
contribute to mammalian transmissibility of deletions in the stalk region of the NA are fre-
avian H5 viruses. The loss of this glycosylation quently found in viruses isolated from poultry,
site is also reported in H7N9 viruses, thus upon transmission from wild waterfowl, and the
supporting the virus ability to efficiently infect shortened stalk length of NA is associated with
humans (Kageyama et al. 2013). enhanced replication in the intestine and respira-
tory tract of those species (Campitelli et al. 2004;
Li et al. 2011; Zhou et al. 2009). Recent experi-
3.2 Other Virulence Determinants mental findings suggest that this motif also
influences influenza virus transmission
Factors other than receptor specificity influence (Blumenkrantz et al. 2013).
host susceptibility and the pathogenicity of avian Polymerase activity also determines the host
influenza viruses. After a virus particle attaches restriction of influenza viruses, and some adap-
to the cell receptor and is internalized into an tive mutations must occur during replication in
endosome, the fusogenic activity of HA mammals for an avian influenza virus to
22 I. Donatelli et al.

overcome this restriction. In particular, PB2 virulence of the HPAI H5N1 virus in mice (Seo
protein plays a key role in influenza virulence et al. 2002). Several other amino-acid
and adaptation of avian influenza viruses to substitutions and the presence of a PDZ-ligand
growth at 37  C (the temperature of the mamma- domain at the C terminus of NS1 enhance viral
lian respiratory tract). A glutamic acid–to–lysine replication and thus act as determinants of viru-
mutation at position 627 (E627K) enables poly- lence (Jackson et al. 2008; Twu et al. 2007).
merase activities and viral replication in In summary, several molecular factors may
mammals (Subbarao et al. 1993; Hatta contribute to pathogenesis, host-range restric-
et al. 2007). Thus, this mutation is frequently tion, and transmission of influenza A viruses.
selected during replication of avian viruses in Wild waterfowl are the main reservoir of most
humans and poultry. In addition, an aspartic influenza A viruses, and acquisition of the adap-
acid–to–asparagine mutation at position tive mutations described above, during circula-
701 (D701N) and a threonine-to-alanine substi- tion in terrestrial poultry, may facilitate
tution at position 271 (T271A) of PB2 affect the transmission to humans. Importantly, viruses
replicative ability of avian viruses and are isolated from domestic poultry have low affinity
involved in influenza virus adaptation and trans- for SA-α2,3 compared to that of viruses isolated
missibility to novel hosts (Li et al. 2005; Bussey from wild aquatic birds, suggesting a role of
et al. 2010; Zhou et al. 2013). Several studies these species in the emergence of new influenza
have shown the role of PB2 in influenza virus viruses (Kimble et al. 2010; Perez et al. 2003;
transmissibility and replacement of the key PB2 Wan and Perez 2006; Costa et al. 2012). In addi-
residues in the 2009 pandemic H1N1 virus, tion, pigs have both human-type and avian-type
H5N1 strains, or the 1918 pandemic H1N1 has receptors on their tracheal epithelial cells, and
been directly related to higher replication in the pig’s role in the emergence of novel viral
mammals or respiratory-droplet transmission strains by reassortment events between viruses
(Imai et al. 2012; Herfst et al. 2012; Zhou of different animal origins has been largely
et al. 2013; Van Hoeven et al. 2009; Zhang documented (Ito et al. 1998; Smith et al. 2009).
et al. 2012). Moreover, most of the H7N9 viruses Thus, poultry, quail, and pigs may serve as nec-
isolated from humans possess the E627K muta- essary intermediate hosts for adaptation of avian
tion, whereas the strains isolated from avian spe- influenza viruses from their primary natural res-
cies maintain the typical avian residue, ervoir to humans.
suggesting that this mutation emerges during
virus replication in humans (Kageyama
et al. 2013; Lam et al. 2013; Wang et al. 2014). 4 Pandemic Influenza
Besides the mutations in key PB2 residues, those
in PB1, PA, and NP of the viral RNA polymerase Influenza pandemics occur when new strains of
complex also influence the host range of influ- influenza viruses emerge and acquire the ability
enza viruses (Gabriel et al. 2005; Watanabe to efficiently sustain human-to-human transmis-
et al. 2009; Manz et al. 2013; Yamayoshi sion to spread worldwide. Unlike regular sea-
et al. 2014; Cheng et al. 2014; Taft et al. 2015). sonal epidemics of influenza, pandemics occur
Finally, PB1-F2 and NS1 proteins contribute at unpredictable intervals and can cause high
to viral pathogenicity. In particular, PB1-F2 levels of mortality. Three influenza pandemics
induces apoptosis, and an asparagine-to-serine occurred during the twentieth century, and the
substitution at position 66 (N66S) in the 1918 emergence of a new pandemic virus completely
pandemic H1N1 and H5N1 viruses is associated replaced the previous subtype virus. The 1918
with increased virulence (Conenello et al. 2007). influenza pandemic, also known as the Spanish
NS1 antagonizes interferon production in flu, was the most severe, causing the deaths of
infected cells, and the aspartic acid–to–glutamic approximately 50–100 million people. That pan-
acid substitution at position 92 (D92E) increases demic was caused by an H1N1 subtype of
Human–Animal Interface: The Case for Influenza Interspecies Transmission 23

influenza A virus, which was probably of avian and patients with an underlying medical condi-
origin (Smith et al. 2009; Taubenberger and tion who were infected with H1N1pdm09 than
Morens 2006). Subsequent pandemics in 1957 among those infected with seasonal influenza
and 1968, also known as the Asian flu and (Domı́nguez-Cherit et al. 2009; Vaillant
Hong Kong flu, respectively, were associated et al. 2009). Since its appearance in 2009, the
with high morbidity but killed many fewer peo- H1N1pdm09 virus has established in the human
ple. The 1957 pandemic virus (H2N2) contained population and continues to circulate as a sea-
the HA, NA, and PB1 genes of avian virus origin sonal H1N1 influenza A virus. At present, the
from reassortment between human and avian frequent transmission of H1N1pdm09 virus
viruses. The 1968 pandemic virus (H3N2) from humans into swine, and the high prevalence
contained an avian HA protein of the H3 subtype of reassortants with cocirculating swine influ-
and a novel PB1 protein of avian origin enza viruses detected in pig herds in several
(Scholtissek et al. 1978; Kawaoka et al. 1989). countries continue to pose a serious threat to
In 1977, the re-emergence of H1N1 viruses public health (Simon et al. 2014; Nelson
after a 20-year absence of the virus from circula- et al. 2015).
tion, caused several outbreaks worldwide that A number of findings have suggested a role
were almost exclusively among persons younger for pigs in the emergence of pandemic influenza
than 25 years. This suggested that older viruses, as intermediate hosts in which avian
individuals were protected by pre-existing viruses adapt to mammals before they transmit
immunity (Wright et al. 2007; Nakajima to humans. The last pandemic provided clear
et al. 1978). Since then, viruses of H1N1 and evidence of the role of these animals in the epi-
H3N2 antigenic subtypes continue to circulate demiology of influenza viruses of pandemic
and cause annual epidemics in the human potential; multiple lineages of influenza A
population. viruses cocirculate in pigs and undergo frequent
In 2009, the world experienced the first pan- reassortment. Moreover, the last pandemic
demic of the twenty first century, which was highlighted the continued challenges of influ-
initially known as “the swine flu” and caused enza, in terms of unpredictability. When the
by a novel swine-origin influenza virus influenza community was alerted to a potential
(H1N1pdm09) that rapidly replaced the previ- H5N1 pandemic, the emergence of an H1N1 was
ously circulating seasonal H1N1 viruses [Novel completely unexpected. For this reason, the
Swine-Origin Influenza A (H1N1) Virus Investi- H2N2 virus that disappeared with the emergence
gation Team 2009]. Although the pandemic virus of the H3N2 virus in 1968 but continues to circu-
belonged to the H1N1 subtype, the antigenic late in aquatic birds still poses a pandemic
divergence between it and the seasonal H1N1 risk for those people born after 1968 who lack
HAs and thus the lack of cross-immunity in a H2N2-specific immunologic memory (Jones
large fraction of the human population, caused a et al. 2014). Our inability to predict the next
rapid global spread of the novel virus, resulting pandemic is a public health concern, and only a
in infection of 20–30 % of the world’s popula- continuous surveillance program to enhance pre-
tion. The H1N1pdm09 virus is genetically paredness will help mitigate the effects of such
related to viruses that circulate in pigs and was an unpredictable and potentially severe disease.
a product of reassortment of influenza virus
genes from North American and Eurasian
swine, avian, and human viruses that may have 5 Animal Influenza
occurred years before emergence in humans
(Garten et al. 2009; Smith et al. 2009). Mostly, The available information indicates that the wild
the H1N1pdm09 virus caused a relatively mild aquatic birds of the world, particularly ducks,
disease, though the numbers of hospitalizations shorebirds, and gulls (Anseriformes and
and deaths were higher among younger people Charadriiformes) are the natural reservoirs of
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to think of making another start, so we stopped where we were. It
rained hard again during the night, and several of the sheep died. At
daylight we made another attempt to reach our old M’thara camp,
and after an hour’s tramp through the thorn forest we had the
satisfaction of once more emerging upon our old camping-ground. It
was just as windy, and rather more swampy than before, but it was
surrounded by masses of restful green vegetation most grateful to
the senses after the blinding deserts and arid wastes of the Waso
Nyiro.
CHAPTER XVIII.
AN ELEPHANT HUNT AND AN ATTACK ON
MUNITHU.

We shoot an elephant—Gordon Cumming on elephants—We send to


Munithu to buy food—Song of Kinyala—Baked elephant’s foot
again a failure—The true recipe—Rain—More rain—The man
with the mutilated nose—The sheep die from exposure—
Chiggers—The El’Konono—Bei-Munithu’s insolent message—A
visit from the Wa’Chanjei—George and I march to attack Munithu.
On arriving at our M’thara camp we were agreeably surprised to find
recent elephant spoor all over the place. Some of the tracks were
very large—possibly those of the old bull I had encountered in the
thorn forest. Jumbi, with some of the men, was at once despatched
to N’Dominuki to inform him of our arrival, and to bring back to camp
the loads of equipment and the stores and cattle left in his charge.
About two o’clock in the afternoon a native came into camp with
the news that a couple of elephants were feeding in the thick bush
only a few hundred yards from our camp. Snatching up our rifles, we
hurried out in pursuit. El Hakim carried his ·577 Express, George the
8-bore, and I my ·303. Advancing cautiously through the jungle, we
came up with the animals about 200 yards from camp. It was a very
bad place in which to shoot elephants, as the bush was so thick and
dense as to be almost impenetrable, and it also concealed our
quarry from view. Now and again among the leaves we caught sight
of a patch of brown hide or the tip of an ear, but nothing showed up
well enough to justify a shot, though we were well within twenty
yards of our quarry.
After a long and breathless wait we held a whispered consultation,
and came to the conclusion that we might perhaps have a better
chance from the opposite side. Leaving the native who had warned
us of their presence safely ensconced in the fork of a thorn tree to
watch the elephants, we, accompanied by Ramathani, succeeded in
circumnavigating them, being lucky enough to reach the other side
without being winded. There we found a small ant-hill, from the top of
which we were able to see over the undergrowth. The elephants
were then in plain sight about 150 yards distant. They were both
bulls, one of them a magnificent old fellow with a very large pair of
tusks. The other was a younger animal, with rather smaller ivories.
The old bull was not the one I saw in the thorn forest before, as I had
at first supposed, his tusks being of a different shape, being longer,
but thinner, and not so discoloured. In spite of El Hakim’s knowledge
of woodcraft, we were unable to get any nearer to them, the bush
being too thick and solid. We waited, therefore, for some time,
hoping they would come closer, as they were now between us and
the camp, and what little breeze was stirring was blowing directly
from the camp on to them; and we calculated that on scenting it they
would come down wind, and so nearer to the spot where we lay
concealed. However, they did not seem to mind the proximity of the
camp, although, even from where we were, we could distinctly hear
the men talking.
For two hours by the watch we waited, not daring to move, or
venturing to speak above a whisper. At last we sent Ramathani by a
circuitous route back to camp to call out the men, with instructions
that they were to surround the elephants on every side except that
on which we had taken up our position, and, by making slight noises
in the bush, endeavour to drive them gently down in our direction.
These instructions the men carried out; but to our great alarm the
elephants showed a disposition to break through the line of beaters
on the camp side. Fearing that we should lose them altogether, El
Hakim, contrary to his usual practice, took a shot at the big bull at a
little over a hundred yards. Bang! went the ·577, and a steel-tipped
bullet crashed its way into the elephant’s shoulder. Turning instantly,
he charged in our direction, followed by his companion; but when
within forty yards the left barrel spoke, and they turned aside, and,
smashing through the forest to our left, disappeared, followed by
another shot from El Hakim, which caught the smaller elephant
somewhere in the stern. We set off at top speed in their wake, but at
first they outstripped us, though their tracks were plainly visible in the
soft earth, and at intervals on the path we saw tiny flecks of blood.
The stricken elephant was evidently bleeding internally.
At the end of an hour’s hard going, we could see by the freshness
of the footprints that we were once more getting closer to them. It
therefore behoved us to proceed with great caution, as an old bull
elephant who has been wounded is apt to make himself unpleasant
if it so happens that in the ardour of pursuit the hunter gets at all
careless, and it is most disconcerting, on rounding a bush, to find the
elephant’s head when one expected to see his tail. Suddenly, as we
were creeping silently along, we heard a quick shrill scream of rage,
apparently from the other side of some bushes twenty yards away.
Thinking the wounded beast was about to charge, we hopped aside
out of the path and behind the adjacent bushes with a celerity only to
be acquired under similar circumstances. It was, however, a false
alarm, as, on peering round the bushes, we saw both elephants
standing in the jungle about a hundred yards distant, looking at us.
As soon as we made a move they turned and plunged once more
into the bush, with us in hot pursuit. They, however, crossed a small
stream that flowed through the bush a few hundred yards further on,
and disappeared. When we reached the stream we found it to be so
swollen by the previous few days’ rain as to be unfordable. We
therefore returned to camp and despatched Barri and two others to
follow the elephants, and to send word back to camp when they
stopped once more.
On our return we found N’Dominuki in camp. He greeted us with
every sign of pleasure, and we were just as pleased to see him, as
his conduct during our absence was of the very highest order, and
we regarded him as a very real friend. We had a long talk with him,
and he confirmed the unpleasant news we had heard about the
scarcity of food in M’thara and the hostile attitude of Bei-Munithu.
Just before dusk a report from Barri came to hand to the effect that
the two elephants, after working round in a circle, were now not far
from camp. Once more we set out, and after half an hour’s walk we
reached the place where they were reported to be resting. Creeping
stealthily up, we found that the big bull had succumbed to his
injuries, and lay stretched out on his side quite dead. The other
elephant, very much on the alert, was standing a little way off in the
bush, and George and I immediately set out to try and bag him. He
was, however, much too wary, and aided by the gathering darkness
succeeded in eluding us in the thick bush, so we returned to camp in
the hope that he would return during the night to his dead
companion.
Early next morning, therefore, George and I set out in search of
the other elephant, but he was nowhere to be seen, having evidently
cleared out of the district for good during the night. After breakfast
we went to the spot where the dead elephant lay, in order to chop
out the ivory. He was a magnificent beast. I measured him with the
tape as accurately as possible, and the following are the
measurements which I jotted down in my notebook at the time:—
The distance between two spears planted vertically in the ground,
one in a line with the sole of the foot and the other against the
shoulder as he lay, measured 10 feet 8 inches, which may be taken
as his height. From the forehead to the root of the tail the tape
marked 13 feet 3 inches. Round the girth he measured 18 feet 8
inches; while the circumference of each fore foot totalled up 4 feet 8
inches, though, on measuring the tracks, I found they were fully 5
feet in circumference, an increase due to the expansion of the foot
under the enormous weight of the animal. The tusks weighed 75 lbs.
and 65 lbs. respectively, the lighter tusk having had a piece about 18
inches in length broken off from the end.
On cutting him up we found the steel core of a ·577 bullet in his
chest, which might, from its appearance, have been there for years.
It was of precisely the same pattern as those used by El Hakim, and
as Mr. Neumann, the only man who had shot elephants at M’thara
before, did not, so far as I know, use steel core bullets we came to
the conclusion that it was a bullet which had been fired some two
years previously by El Hakim at the same elephant, which had got
away after being wounded. El Hakim said he had lost one or two
elephants in this bush about that time, after wounding them.
The bush round North Kenia is very bad for elephant-shooting. It is
terribly thick and leafy, and the elephants themselves very wild.
Neumann, after a fortnight’s unsuccessful hunting in this place,
became altogether disheartened, and, after a thorough trial of the
district, came to the conclusion that he was wasting his time and
strength, and gave up the task as hopeless. I was much interested in
reading in Mark Twain’s “More Tramps Abroad” an extract from
Gordon Cumming’s account of his experiences with an elephant
which he gives in that book. It is such a quaint account, and is in
such contrast to the modern sporting methods and ideas, that I make
no apology for inserting it here:—
“Having planted a bullet in the shoulder-bone of an elephant, and
caused the agonized creature to lean for support against a tree, I
proceeded to brew some coffee. Having refreshed myself, taking
observations of the elephant’s spasms and writhings between the
sips, I resolved to make experiments on vulnerable points, and
approaching very near, I fired several bullets at different parts of its
enormous skull. He only acknowledged the shots by a salaam-like
movement of his trunk, with the point of which he gently touched the
wounds with a striking and peculiar action. Surprised and shocked to
find I was only prolonging the suffering of the noble beast, which
bore its trials with such dignified composure, I resolved to finish the
proceeding with all possible despatch, and accordingly opened fire
on him from the left side. Aiming at the shoulder I fired six shots with
the two-grooved rifle, which must have eventually proved mortal,
after which I fired six shots at the same part with the Dutch six-
pounder. Large tears now trickled down from his eyes, which he
slowly shut and opened, his colossal frame quivered convulsively,
and falling on his side he expired.”
The next day the bulk of the men were still busily engaged in
cutting up the carcase of the elephant, slicing the meat into strips,
which they dried in the sun or in the smoke of their fires. As we were
badly in need of grain food, we decided to send a party of men to
Munithu and Zura to try to buy food, and also to bring back the few
remaining loads of trade goods still in Bei-Munithu’s possession. Our
purpose, as much as anything, was to test the temper of the natives
there, and to see whether Bei-Munithu, now that he had heard of our
safe arrival, was still determined to put his treacherous plans into
execution.
In the mean time the men were busy gorging the elephant meat. A
little M’kamba boy named M’waniki composed a song, which was
sung with great success by a lady named Kinyala, who, with many
others, had on the previous day joined their fortunes to those of our
porters, in many cases deserting their husbands and homes in
M’thara that they might follow the safari to Nairobi, which, to these
poor creatures, was a vast and distant city of a splendour beyond
their wildest dreams. Jumbi had strict orders not to allow any women
in camp, but in spite of our frequent “drives” some of them managed
to conceal themselves and escaped the general clearance. Kinyala
attached herself to the modest and respectable Ramathani, and as
she possessed some personal charms—to the mind of a native—
that individual made no very strenuous objections. Well, Kinyala
sang the song I have already spoken of, and it “caught on”
tremendously; and, as a consequence, it was dinned into our ears
day and night. It ran thus:—
Song of Kinyala.
(Solo) “Wasungu kwenda wapi?
(Omnes) Kwenda kwa Rendili.
(Solo) Kwani kwenda kwa Rendili?
(Omnes) Kwa sababu ya n’gamia.
Wasungu wa’ntaka n’gamia;
Wasungu wa’ntaka kondo ya mafuta;
Huko kwa Rendili n’yama tele-tele.”

Translation.
(Solo) “Where are the white men going?
(Omnes) They are going to the place of the Rendili.
(Solo) Why do they go to the place of the Rendili?
(Omnes) Because of the camels.
The white men want camels;
The white men want fat-tailed sheep;
There in the place of the Rendili is very much meat.”
The above is a specimen, with a somewhat free translation, of the
half song, half recitative, so dear to the native heart. It is generally
impromptu, and contains at times a certain dry humour and caustic
comment on current events that is quite unexpected.
Thinking that this was a good opportunity of making another trial of
baked elephant’s foot, I caused a large hole to be dug in the centre
of the camp, and a party of men were sent into the forest to gather
sufficient fuel. When the fuel arrived, an immense fire was kindled in
the hole. All day long it burnt, and in the evening we were rewarded
by the sight of a glowing pit filled to the brim with red-hot ashes. With
much trouble (the foot weighed nearly forty pounds, and the furnace
was very hot) we placed the bulky tit-bit in the ashes, and then,
building a large bonfire over it, we considered that we had done our
part of the business, and hopefully awaited developments.
Several times during the ensuing twenty-four hours El Hakim or I
carefully poked the fire with an iron bar in the endeavour to ascertain
whether the foot was cooking properly. We were absolutely certain
that, if it were not burnt to a cinder, it would be at least sufficiently
cooked, and it was in high hopes that we should at last partake of
the reputed dainty, that we disinterred it from the miniature crater on
the following evening. Alas and alack! in spite of all our toil and
trouble it was as indiarubber-like as its predecessor. Twenty-four
hours in the fire had burnt the outside and reduced the foot
somewhat in size, but the rest was as uncooked as if it had never
been near the flame. This result, however, was entirely our own fault,
as, on looking up the subject since, I find that we were entirely wrong
in our method of cooking it. The true recipe, as given by Mr. Foa,[17]
is as follows:—
“Take an elephant’s foot, preferably young and very fresh; remove
the white flesh which covers the bone, and cut it into strips the
thickness of your finger, reminding one of sticks of pâté de
guimauve. Place the appetizing strips for two days in the sun to dry,
and collect the pure fat which exudes from them in the form of clear
oil. To make the dish known as mwendo wa nzou, take one of these
strips, cut it into small pieces, put it into a saucepan containing a little
water, place it on a gentle fire, and renew the water several times.
When a jelly has formed, add to it the oil in which you have browned
a few onions, a little thyme, etc., or an equivalent aromatic plant, one
or two very strong chillies, and let it cook gently for twenty hours, still
adding water when necessary. Serve hot, with manioc flour or grated
biscuit separately.
“N.B.—This dish keeps several days, and only requires re-
warming.”
So far, so good; but as our friend N’Dominuki did not keep a
general store where we might have been able to purchase the few
onions, thyme, and chillies, etc., required, it would not have helped
us much even had we possessed this recipe at the time.
The weather now changed considerably for the worse, the fine,
clear, sunny weather of the Waso Nyiro being succeeded by heavy
rains and cold winds. These rains were nearly two months late, and
the inhabitants of M’thara were half starving in consequence; but
they came now with a vengeance, though they were too late to do
any good to the bean crop. Day after day we endured a steady
downpour, which killed off the sheep by twos and threes every night.
Of the men whom we had sent to buy food in Munithu, half returned
two days later. They reported that Bei-Munithu had refused to sell
any food, though he had more than plenty, and he had also refused
to give up the loads still in his possession. Furthermore, he had
secretly planned to attack them during the night and put them to
death. They had, however, received timely warning from a friendly
native, and so escaped; some of them coming back to us, and the
remainder going on to Zura to see how matters stood at that place.
A strange Swahili accompanied them. He had been one of Dr.
Kolb’s porters, and had been left behind, sick, at Munithu. He asked
permission to return to Nairobi with us, which we readily granted. He
also confirmed the news of Bei-Munithu’s hostility, and his
statements threw light on several little matters which had puzzled us.
It now seemed more than probable that the whole of the G’nainu
affair had been planned by that old rascal in conjunction with the
Wa’gnainu, which would explain why those people were so
completely prepared for us on the morning when we went into their
country to demand our trade goods; and why they opened the attack
without listening to what we had to say.
This Swahili was a peculiar-looking man, as at some time or other
the end of his nose had been bitten off by a hyæna. The voracious
brute had actually dashed up to where he was sleeping with other
men round a fire, and, seizing him, had tried to drag him away. His
companions awoke at his cries, and drove his assailant off with fire-
brands. When the hyæna seized him, it had bitten his face and taken
the end of his nose clean off. When rescued, he searched for and
found the piece, and, sticking it on again, he secured it with a length
of hair or fibre, which he passed over it and tied at the back of his
head; however, the piece slipped and finally grew on to his face an
inch to the left of its proper position, so that he had one nostril
complete and in its right place, while the other grew apparently out of
his cheek. He still kept the piece of fibre tied round it, and could not
be induced to remove it, though the piece of nose was firmly united
to his cheek. El Hakim offered to perform an operation in plastic
surgery and replace it in its rightful position, but he steadfastly
refused, and El Hakim did not press the point. This man turned out to
be a very good drover, and rendered valuable service in that way on
our march down country after leaving M’thara.
On the 18th October, after six days’ continuous downpour, the rain
ceased for a couple of days. Thirty of the sheep had succumbed,
and the others were very sick, as a large number of them were
suffering from the effects of the unaccustomed exposure. As the men
who had gone on to Zura had not returned, we sent Jumbi with
several men to see what had become of them. We were very
anxious to leave M’thara, but we could not venture round West Kenia
without a supply of food in hand, as game might be scarce. The
camp already commenced to smell very badly, as the rain had
soddened the earth and converted it into a bog. The quantity of meat
drying in the smoke of the fires was already six days old, and though
it was relished by the men, we ourselves found the effluvia offensive.
During our stay large numbers of natives came into camp for
medicine to cure the ulcers caused by “chiggers.” The chigger (Pulex
penetrans) is a species of flea which is in the habit of selecting the
sole of the foot or the flesh under the toe-nails as a place of
residence. Once safely ensconced under the skin, the female
chigger proceeds to lay large numbers of eggs, which are disposed
in the form of a round bag, the size of a pea. The irritation produces
a troublesome ulcer, amidst which the young larvæ appear. Some of
the natives of M’thara had lost many of their toes through these
pests. It was especially sad to see the little children with their feet
horribly lacerated, who were brought into camp for treatment by their
despairing mothers. Under El Hakim’s direction, I made a large
quantity of ointment by mixing iodoform and powdered boric acid
with hippo fat, and this was freely dispensed among the sufferers,
their expressions of gratitude amply repaying us for any trouble we
incurred in relieving them. I myself had been crippled for three weeks
on one occasion by chiggers, and was therefore in a position to feel
for the unfortunate wretches.
An “elkonono,” or native blacksmith, came into camp one day, and
we got him to manufacture a few knives and ornaments for us from
iron which we provided. He took up his quarters, together with a
couple of his wives, in a shelter which we had built for the mules. His
tools were very simple, consisting merely of a flat stone for an anvil,
and a piece of round bar iron, 1½ inches in diameter and about 8
inches in length, slightly flattened at one end, which formed his
hammer. He also possessed a very crude pair of iron pincers.
His forge, which was fed with charcoal, was formed by a hole in
the ground, into which the air was forced from bellows through a
short pipe of baked clay. The bellows consisted of a couple of
goatskins with a clay nozzle at one end. The other end was open,
the sides being sewn to two flat pieces of wood, to which small
straps were attached. One of the blacksmith’s wives thrust her
fingers through these straps, and, opening her hand and at the same
time raising her arm, she filled the goatskin with air. The hand was
then closed and the goatskin sharply compressed by a downward
stroke of the forearm, and the air contained in it was driven out of the
nozzle through the clay pipe into which it was inserted, and so into
the glowing charcoal. She worked a bellows with each hand
alternately, thus providing an almost continuous draught.
Our “elkonono” set to work and toiled away for three days “from
rosy morn till dewy eve,” and at the end of that time had
manufactured two knives and a couple of ornaments. We asked him
if it was not rather slow work, and to our great disgust he remarked,
“Yes, it is true I have not made much for you, but” (proudly) “I have
made knives for all your children!”
On inquiry we found that whenever our backs were turned, our
porters had gone to the “elkonono” either to have a knife made or
repaired, and as a result he had done ten times more work for them
than he had for us, though we were paying him and he was using
our material. Our simple “elkonono,” however, professed ignorance,
saying that he thought that in doing these little jobs for “our children”
he was serving us; which might or might not have been the truth.
A deputation from the Wa’Chanjei came into camp on the 17th of
October. They came ostensibly on a friendly visit, but really to see
how the land lay. After they had spent an hour or two in our camp,
they evidently came to the conclusion that we were quite able to take
care of ourselves, and politely and silently withdrew.
On the 19th of October the rain ceased for a while, to our
immense satisfaction. During the morning Jumbi returned from
Munithu and Zura with the remainder of the men. He had seen Bei-
Munithu and demanded that our loads should be given to him. He
was met by an insolent refusal. In addition, Bei-Munithu sent an
insulting and threatening message to the effect that “If the Wasungu
themselves came to the door of his house with their guns, he would
not give up the loads!”
Jumbi also reported that food was extremely plentiful in both
Munithu and M’thara, but the inhabitants of those places, acting
under instructions from their chiefs, point blank refused to sell us
any.
ORNAMENTS WORN BY A’KIKUYU WOMEN.
1, 2, 3, 4.Leather belts ornamented with beads and cowrie shells.
5, 6, 7, 8.Girdles of iron chain and beadwork.
9, 10.Collars of iron chain and beadwork.
11, 12, 13, Necklaces of twisted iron, brass and copper wire, with pendant
14. chain.
15, 16.Armlets of thick brass wire.

The situation was now serious, and after dinner that evening we
held a consultation to decide what was to be done. Leaving M’thara
without a supply of food was out of the question, and to stay in
M’thara was to court disaster. I therefore proposed to El Hakim that I
should proceed to Munithu on the morrow with an armed party,
leaving him in charge of the camp, and make a demonstration in
force at Munithu, and see if that would not bring old Bei Munithu to
his senses, and George volunteered to accompany me. As both El
Hakim and I considered that such a proceeding would not entail any
serious risk, he acquiesced in my proposal. We therefore determined
that El Hakim should stay in command of the camp with one or two
men—who, with himself, would, he hoped, be sufficient to defend it
should it be attacked in our absence—and that George and I, with all
the men who could be spared, should go over and endeavour to
convince Bei-Munithu and Co. that we were better as friends than
enemies.
Accordingly at noon on the following day George and I started for
Munithu. We had sixteen men armed with Sniders, but we were
terribly short of ammunition, possessing not more than seven
cartridges per man, a fact which made the undertaking rather more
hazardous. Considered afterwards, in cold blood, it seems to me to
have been foolish in the extreme to have attempted to penetrate into
a hostile country, so thickly populated as Munithu, with so few men
and so little ammunition; but at the same time there was no help for
it. Luckily, both George and I had a fair number of cartridges. I, as
usual, carried my ·303, but George, whose rifle had once or twice
missed fire, did not see the fun of risking his life with a weapon which
might fail him at a critical moment; so he carried my 20-bore shot-
gun with a supply of ball cartridges. These ball cartridges contained
2½ drams of powder, which propelled a spherical leaden bullet about
the size of an ordinary marble, and a double-barrelled gun using
them was a very ugly weapon up to a couple of hundred yards.
We pushed on till sundown, and camped at a distance from Bei-
Munithu’s village, and turned in early, as we needed all our energy
for the morrow.

FOOTNOTES:
[17] “After Big Game in Central Africa,” by Edward Foa,
F.R.G.S. (Translation from the French by Frederic Lees), 1899,
pp. 59, 60.
CHAPTER XIX.
FIGHT AT MUNITHU AND DEPARTURE FROM
M’THARA.

Attack on Bei-Munithu’s village—Poisoned arrows—The burning of


the village—The return march—Determined pursuit of the
A’kikuyu—Karanjui—George’s fall—Return to the M’thara Camp
—Interview with Bei-Munithu—His remorse—Departure from
M’thara—Rain—Hyænas—A lioness—Bad country—Whistling
trees—A lion—Increasing altitude—Zebra.
An hour before sunrise we arose, and, giving the men the most
precise instructions to husband their ammunition to the utmost and
leave any shooting to George and myself should it become
necessary, we marched on to Bei-Munithu’s village. The moment we
sighted it, where it stood on the summit of a hill, we rushed forward
with a cheer, and, swarming up the side of the hill, we succeeded in
getting into the village before the inhabitants knew what was
happening. It was captured without a shot being fired, the natives
fleeing out at the other end and into the bush. Instructing the men to
collect as much food as they could carry, I took three or four with me
and made for the huts where our goods were stored. Breaking them
open, we soon had the loads out, and I then proceeded to Bei-
Munithu’s hut. Bei-Munithu himself was nowhere to be seen. On
searching his hut I found a large quantity of our goods stowed away
in odd corners, and I was not at all surprised to find that some of
them were a portion of the goods which were supposed to have
been stolen from Bei-Munithu’s charge by the Wa’gnainu, and in
which that old arch-traitor had evidently gone shares. I also found
and promptly confiscated an old muzzle-loading musket, which was
among his most treasured possessions.
By this time, as the men had collected all our loads of trade goods
and also a few loads of food, I gave the command to retire. As I did
so the phwit! phwit! of poisoned arrows aroused our attention, and a
few of the tiny feathered shafts fell into the village and stuck
quivering in the ground. It was very evident that the A’kikuyu did not
intend to let us get away without a struggle. The men had also
collected a few head of cattle and a large number of sheep and
goats; and as it seemed that we should have to fight, I determined to
make a running fight of it, and make it a good one while we were
about it, and so teach the enemy a lesson, though we were sadly
handicapped for want of Snider ammunition.
When I had got my little force together, I first set fire to the village,
and then formed them up outside. As the enemy would most likely
harass our rear, I took the rearguard myself, putting George in
command of the bulk of the men, with the loads and the captured
stock. I asked him at the same time to see that the men did not fire a
shot till it was absolutely necessary. Barri, the Somali, took the
advance guard of our little column.
By this time the smoke of the burning village and the cries of the
fugitive inhabitants had aroused the whole country-side, and from
the manner in which the war-cries resounded over hill and dale on
every side, we discovered that we were in for a rather rough time.
Our little force therefore moved off in the order described at ten
minutes to eight in the morning, on the return march to M’thara.
The first hour’s march took us through a number of scattered
villages, the inhabitants of which fled on our approach and joined the
ever-growing force which threatened our rear. The villages were built
in the midst of extensive banana plantations, and it was here that the
first symptoms of serious opposition manifested themselves. A
number of warriors concealed among the bananas commenced to
pepper us with poisoned arrows at very short range, though
fortunately none of the men were hit. One bold warrior let fly an
arrow at George at not more than thirty yards, and then, catching my
eye, he subsided behind a banana tree. He did not take into account
the penetrative power of a ·303, and I think he must have been a
very surprised native indeed when my bullet passed through the
pulpy stem of the banana. Another let fly an arrow at the mule, which
was being led, and missed her by an inch. George caught him with
the 20-bore, dropping him, and then, swinging round, stopped
another adventurous warrior who was creeping up to him with the
other barrel, to the native’s intense discomfiture.
After a little more light skirmishing of this description on the route,
we reached a small clearing, and on coming out into the open were
cordially greeted with a shower of arrows from a large number of the
enemy concealed in the bush on the opposite side. A smart fusillade
from our men put a temporary check on the proceedings of this
informal reception committee, and we continued our advance.
Another warrior, who recklessly exposed his person in order to make
insulting remarks with greater effect, retired precipitately with a much
better idea of the theory of projectiles than he had hitherto
possessed; and another who received a spherical ball in the leg at
200 yards from George, ceased to take any further interest in the
proceedings. After this interchange of civilities the enemy kept out of
range for awhile, and allowed us to cross the remainder of the
banana plantations in safety, and into the thick bush on the other
side; however, they were merely gathering reinforcements and
preparing to attack in earnest.
It being, I believe, an axiom of warfare that “a retreating column
should resemble a scorpion and carry its sting in its tail,” I picked out
Resarse ben Shokar and Asmani ben Selim as being two of the
coolest men, and they, together with a boy named Koranja, who
carried my cartridge-bag and binoculars, formed my rearguard.
George, with the main body of the men, had his hands full in
preventing them firing away their few cartridges at the scenery, and
then throwing down their loads and bolting—a proceeding which
would have resulted in immediate and overwhelming disaster.
When we got into the thick bush the enemy tried several times to
rush us, but the bush was as much in our favour as theirs, as it was
too thick for them to use their arrows, for which providential
circumstance I was devoutly thankful. Once or twice some of the
bolder spirits advanced openly along the rearward path in the
endeavour to rush my two men and myself, and cut us off, but the
Lee-Metford is a beautiful weapon under such circumstances, and
they abandoned the attempt. The enemy were constantly increasing
in numbers, and the noise they made with their shouting and war-
cries was terrific. I think they did it to keep their courage up, but it is
a terrible waste of breath. They soon afterwards concentrated in
force on our flanks and rear and tried another rush, but we were able
by judicious shooting to keep them from getting too close.
The bush now ended in a ravine, at the bottom of which was a
small stream. On the opposite bank of the stream was the edge of
the thick forest which I have previously mentioned, and which
extended as far as the open space called Karanjui, an hour’s journey
further on. While George superintended the crossing of the men and
animals, I and my two men squatted down in the bush at a turn in the
path, about a hundred yards in the rear, and prepared a surprise for
the enemy. They were howling in a most unmelodious key, and
between the howls they informed us that they were coming to kill us,
a piece of news which seemed to me to be quite superfluous under
the circumstances; they added the interesting information that they
were going ahead of us into the wood, and were there going to
ambush us. I had already guessed that such was their intention, but I
determined that such an awkward situation should not occur if I
could prevent it. Our men in their turn inquired why, if they were
coming to kill us, did they not come and carry out their intention? It
appears that these exchanges of repartee are part of the ceremonial
of A’kikuyu warfare, though at the time it seemed to me to be very
childish. The enemy then shouted, “Resarse kutire mwaka,” literally,
“Your bullets have no fire;” meaning to say that they did not hurt—
evidently Bei-Munithu’s teaching. They were asked to “come and
see,” an invitation they accepted. My little ambush worked perfectly,
and they were within twenty yards when I opened fire. Two of them
were put out of action at the first discharge, and the others retreated
in disorder, having learnt a wholesome lesson.
A message from George then reached me, informing me that all
the men and animals were now safely across the stream, so I
followed him. Just as I got across the stream in my turn, some of the
enemy, who had crossed higher up, made another rush, one of the
most dangerous they had so far attempted. They got close enough
this time to throw spears, one of which killed an unfortunate goat. I
used my revolver, and George his gun, and they once more retired.
One of the A’kikuyu who threw a spear was shot with an arrow by
one of our Wakamba, who carried a bow and arrows which he had
found in Bei-Munithu’s village. The M’kikuyu’s arm was still uplifted in
the act of throwing the spear when our man’s arrow caught him in
the side of the chest, under the armpit. The light arrow went halfway
through his chest as easily as if he had been made of butter. If I had
not seen it myself, I should not have credited their tiny arrows with
such penetrative power. After crossing the stream we were beyond
the boundary of the Munithu district, and I did not think it probable
that we should be followed any further, as these people do not as a
rule go into the territory of another tribe; but in this case I was
mistaken.
During our march through the forest they made one or two
abortive attempts to close with us, but finally contented themselves
with howling, and, between the howls, threatening what they would
do to us when they got us to Karanjui. It was my intention to try to
reach Karanjui first, so that we might have a reasonable chance of
crossing it before the enemy surrounded us. This we succeeded in
doing, and we were halfway across when the leading warriors,
forsaking the cover of the forest, trooped out into the open about 300
yards away. Asmani and Resarse, for whose conduct I have nothing
but praise, waited behind to assist me in delaying the A’kikuyu, and
so enabling George with the men and cattle to get across and into
the cover of the forest on the other side. One of the enemy, bolder
than the others, climbed on an ant-hill 70 yards distant from me, and
danced at us in derision, making obscene gestures and insulting
remarks. He desisted, however, on receiving a message from the
·303 that he was unable to disregard.
The next move of the enemy was to try to work round the western
edge of Karanjui, which was about 500 yards away, and so get
ahead of us. I took a few long shots at them, and wounded one man
(who I afterwards found out to be a nephew of Bei-Munithu) in the
leg, and soon stopped that game. George and the others were by
this time once more in the forest, so I retired from my place in the
open, and with my two men took up a fresh position at the entrance

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