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PROKARYOTES vs EUKARYOTES
• Eukaryotic
o Eu = true
o Karyotes = “kernel”, soft part, center
o True nucleus
• Prokaryotic
o Pre = before
o Karyotes = “kernel”, soft part, center
o “before nucleujs”
PROTOPLASM vs CYTOPLASM
• LYSOSOME
o Cellular digestive organelles
o Have more enzymes than phagosomes
o Contains acid phosphatases
o Functions:
▪ Oxidation of some organic substrates by the
removal of hydrogen atoms and their
subsequent transfer to molecular oxygen (O2),
producing hydrogen peroxide (H2O2)
-H2O2 broken down by another peroxisomal
enzyme, catalase, that transfers its oxygen to
o Particularly abundant in phagocytic cells (e.g. other compounds
macrophages and neutrophils) - Function esp. useful in kidney and liver cells for
o Presence of membrane protects other cytosolic the oxidation of toxic substances including
components from hydrolytic activity, although most prescription drugs and ethyl alcohol (degraded
lysosomal enzymes activate only at pH 5.0 (lysosomal to acetic aldehyde)
pH) and are inactive at pH 7.2 (cytosolic pH). ▪ β-oxidation of long-chain fatty acids (18 carbons
o Lysosomal enzymes are sometimes released and act in or longer)
the extracellular environment; e.g. destruction of bone ▪ Purine metabolism
matrix via osteoclasts’ collagenases; in response to o Other peroxisomal enzymes in liver and kidney cells:
inflammation or injury D- and L-amino acid oxidases, hydroxyacid oxidase
o Residual bodies o Formation not clearly elucidated, but appears to
- Various size involve vesicles budding off of the sER; peroxisomal
- Various electron densities enzymes synthesized and imported from free
- Contain indigestible materials such as dye, cytosolic polyribosomes to the peroxisomes via a
certain lipids specific amino acid sequence in their carboxyl
- Lipofuscin = wear and tear pigments; marker for terminals
cell aging • CYTOSKELETON
o provides structural stability for the maintenance of
cell shape, cell movement, and cell component
rearrangement
o Microtubules
▪ Organized into axonemes in the cytoplasmic
• PERIXOSOMES (MICROBODIES)
extensions called cilia and flagella
o Kills bacteria using hydrogen peroxide
▪ Thickest
o For detoxification and beta-oxidation
▪ Composed of tublin heterodimers
o Participates in gluconeogenesis
▪ Microtubules of cilia are stable; while those of
o Contains D- and L- amino oxidases, catalase, and
mitotic spindles are short loved
hydroacid oxidase
▪ Functions:
o Contain enzymes involved in lipid metabolism
- Intracellular transport of membranous vesicles
o Membrane-bound spherical organelles that utilize
- Axoplasmic transport in neurons, melanin
oxygen for their metabolic functions
transport in pigment cells
- Movement of cilia and flagella
- Attachment of chromosomes to the mitotic
spindle and their movement during mitosis and
meiosis
- Cell elongation and movement (migration)
- Maintenance of cell shape
▪ Monomers are added rapidly at the (+) end with
hydrolysis of ATP
▪ Assembly and disassembly of subunits from F-
actin are promoted by profiling and cofilin
(respectively)
▪ Found in microvilli (cell extensions that increase
surface area for absorption)
▪ 5-7nm diameter (thinnest)
▪ Usually composed of actin protein
- In striated muscles: actin arranged with myosin
- In other cells: less stable and can dissociate and
reassemble
▪ Involves Ca2+ , cyclic AMP and actin-binding
proteins in cytoplasm
▪ Types:
✓ Centrosome
- Organized around two centrioles
- Before cell division, the centrosome also
duplicates itself
- During mitosis, centrosome divides into half and
move to opposite poles of the cell, becoming
the MTOC for the mitotic spindle
✓ Basal bodies
- Anchoring structures
- Controls assembly of axoneme
- Guides formation of appendages (cilia flagella)
✓ Cilia
- Present in respiratory and female reproductive
system
✓ Flagella
- Seen in tail of sperm cell and mitotic spindle
apparatus ▪ Function:
▪ Location: o Must interact with myosin to contract
- Throughout cytoplasm - In muscle cells, myosin forms thick filaments
- In cilia and flagella (form axoneme and its - In non-muscle cells) soluble forms only
anchoring basal body) o Endocytosis & exocytosis - microvilli
- In centriole and mitotic spindle contraction
- In elongating process of the cell o Cell movement
o Microfilaments o Movement of organelles, vesicles and
▪ Allow cellular motility and contractile activity granules -cytoplasmic streaming
▪ Thin, polarized, shorter, and are more flexible o Cell shape maintenance
than microtubules o Equatorial constriction of dicing cells
▪ Composed of G-actin monomers, that assemble ▪ Location:
into F-actin
o Non-muscle cells: distributed irregularly in
cytoplasm • PROTEASOMES
o Locally accumulated as thin sheath o Non-membranous cytoplasmic protein complexes
beneath plasma membrane composed of four stacked rings, each with 7 proteins
o Parallel strands in microvilli core (including protease), arranged in a cylinder
o Leading edge of pseudopod cytoplasm o At every end of a cylinder is a regulatory particle with
o Intermediate Filaments ATPase function
▪ Size is between the sizes of the other two o Functions:
▪ More stable than microtubules and ▪ Breakdown of denatured or non-functional
microfilaments polypeptides
▪ Proteins: ▪ Removal of proteins no longer useful for the
✓ Keratin cell, thus restricting various protein activities at
- Family of acidic and basic isoforms each period of time
- Compose heterodimer subunits of int. filaments o Mechanism:
in all epithelial cells ▪ Proteins targeted for destruction are
- In epidermal cells: they accumulate via conjugated with ubiquitin to a lysine residue
keratinization resulting in an outer layer of non by regulatory enzyme complexes →
living skin cells that reduces dehydration formation of a multi-ubiquitin chain →
✓ Vimentin recognition of ubiquinated proteins by
- Most common class III of int. filament protein proteasomal regulatory particles → unfolding
- Found in cells derived from mesenchyme of proteins via ATPase (using energy from
- Ex.: desmin – found in muscle cells glial fibrillar ATP) → transport into the core particle where
acidic protein (GFAP) – found in astrocytes they are degraded into short polypeptides →
✓ Neurofilament released back into the cytoplasm, ubiquitin is
- Major int. filaments of neurons also released for reuse
✓ Lamins
- Family of 7 isoforms in the nucleus
- Form the nuclear lamina inside the nuclear
envelope
o Tubulin heterodimers
- Made of ά-tubulin+ 1 β-tubulin
- Arranged in protofilaments (13 circularly
arrayed globular dimeric tubulin molecules)
• CENTRIOLES
o Polymerization
o Cylindrical group of microtubules – 50 nm diam; 350-
- Dimers polymerize in an end-to-end fashion
500 nm long
(head to tail); ά- of 1 dimer bound to β- of
o 9 microtubule triplets in a pinwheel way
another
o Location:
- Controlled by regulation Ca2+ concentration
▪ Between cell division; near the nucleus
▪ Often surrounded by Golgi complex
o Function
▪ Structural organizers of the cell
▪ For cell division; organize the microtubules of
the spindle
▪ Give rise to basal bodies
o Basal Bodies
▪ Structurally similar to centrioles (9 triplet + 0
doublet)
o Anchoring points and microtubule organizers
Intermediate Filaments
▪ for cilia and flagella
o Intermediate Filaments
▪ Play a supporting or general structure
support; ropelike filaments
▪ Structure
- 8 to 10 nm diameter (thickness)
- With highly variable central rod-shaped domain o Euchromatin
with strictly conserved globular domains at - Finely dispersed granular, lightly stained under
either ends light microscope
- Assembled from a pair of helical monomers that - Active
twist around each other to form coiled-coil - Contains regions of DNA undergoing active
dimers twist in antiparallel fashion(parallel but transcription
in opposite directions) - DNA in chromatin is extensively packaged by
- Composed of proteins that include: basic proteins called histones
- Cytokeratins (epithelial cells) - Each long DNA double helix with its assoc.
- Vimentin (fibroblasts, chondrocytes) proteins is a chromatid
- Desmin (muscle cells) - After DNA replication, two chromatids held
- Glial fibrillary acidic protein (glia) together by cohesion proteins make up a
- Neurofilament protein (neurons) chromosome
o Function – Maintenance of cell shape
o Location
▪ Throughout the cytoplasm
▪ Tonofilaments in desmosomes NUCLEOLUS
LIPOFUCSIN GRANULES
HEMOSIDERIN
INTERPHASE
• G1 Phase
o Between end of M phase and beginning of S
phase
o Synthesis of macromolecules essential for DNA
duplication begins
o Cell volume restored to normal
o Centrioles begin to duplicate themselves
o Cylin: cell cycle halted
o Cycline: cell cycle resumes
o Cell gathers nutrients and synthesize RNA and
proteins necessary for DNA synthesis and
chromosome replication
o Checkpoints:
- Restriction Points – sensitive to the size of the
cell, the state of cell’s physiologic process, and
interaction with extracellular matrix
- G1 DNA-damage Checkpoint – monitors the
integrity of newly replicated DNA
MELANIN
• S Phase (Synthesis)
• Derived from the Greek word MELAS (black) o When DNA is duplicated/ replication
• An endogenous, non-hemoglobin-derived, brown-black o Beginning of the duplication of the centrosome
pigment formed when the enzyme tyrosinase catalyzes with their centrioles
the oxidation of tyrosine of dihydrophenylalanine in o Checkpoint:
melanocytes. - S DNA – damage checkpoint – monitors quality
• The only endogenous brown-black pigment of replicating DNA
• G2 Phase
o Increase in cell volume
o Tubulin and accessory proteins accumulate
o RNA and proteins essential to cell division is
synthesized
o Centriole duplication completed
o Cell examines its replicated DNA in preparation
for cell division
o Period of cell growth and reorganization of
cytoplasmic organelles before entering the
mitotic cycle
o Checkpoints:
- G2 DNA-damage Checkpoint
- Unreplicated-DNA Checkpoint – prevent
progression of the cell into M-phase before DNA
synthesis is complete